EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000018743 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 6599 bases
Position: chrOOHQ01000092.1:6748253-6754851
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000027884	zf-C2H2	PF00096.26	8.1e-23	1	5
ENSMAMP00000027884	zf-C2H2	PF00096.26	8.1e-23	2	5
ENSMAMP00000027884	zf-C2H2	PF00096.26	8.1e-23	3	5
ENSMAMP00000027884	zf-C2H2	PF00096.26	8.1e-23	4	5
ENSMAMP00000027884	zf-C2H2	PF00096.26	8.1e-23	5	5
ENSMAMP00000027884	zf-met	PF12874.7	6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000028604	-	849	-	ENSMAMP00000027884	282 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000018743's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000018743's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000018743	-	79	35.570	ENSMAMG00000015087	znf319b	77	35.570
ENSMAMG00000018743	-	91	32.020	ENSMAMG00000017939	-	79	39.726
ENSMAMG00000018743	-	72	40.541	ENSMAMG00000003040	gfi1b	58	40.541
ENSMAMG00000018743	-	72	37.324	ENSMAMG00000016087	-	80	37.324
ENSMAMG00000018743	-	76	38.931	ENSMAMG00000016542	-	60	38.931
ENSMAMG00000018743	-	57	34.965	ENSMAMG00000010384	-	64	34.211
ENSMAMG00000018743	-	85	34.513	ENSMAMG00000001157	znf236	52	34.513
ENSMAMG00000018743	-	75	34.043	ENSMAMG00000018536	-	61	34.043
ENSMAMG00000018743	-	82	30.882	ENSMAMG00000015670	-	68	30.811
ENSMAMG00000018743	-	82	35.570	ENSMAMG00000022154	-	56	35.333
ENSMAMG00000018743	-	74	32.934	ENSMAMG00000022150	-	51	32.934
ENSMAMG00000018743	-	80	33.516	ENSMAMG00000016519	-	88	33.516
ENSMAMG00000018743	-	72	39.640	ENSMAMG00000004896	gfi1aa	54	39.640
ENSMAMG00000018743	-	95	31.461	ENSMAMG00000002166	zbtb41	71	45.455
ENSMAMG00000018743	-	77	37.791	ENSMAMG00000013419	prdm5	80	32.524
ENSMAMG00000018743	-	89	36.842	ENSMAMG00000022502	-	98	36.842
ENSMAMG00000018743	-	84	31.628	ENSMAMG00000016119	-	86	31.628
ENSMAMG00000018743	-	79	42.424	ENSMAMG00000007352	-	86	42.424
ENSMAMG00000018743	-	67	38.158	ENSMAMG00000015632	snai2	53	37.795
ENSMAMG00000018743	-	73	38.824	ENSMAMG00000022147	-	54	38.824
ENSMAMG00000018743	-	77	37.647	ENSMAMG00000010902	-	58	37.647
ENSMAMG00000018743	-	79	40.000	ENSMAMG00000009051	-	83	40.000
ENSMAMG00000018743	-	79	33.333	ENSMAMG00000018137	-	60	33.333
ENSMAMG00000018743	-	74	33.333	ENSMAMG00000008000	znf341	50	33.333
ENSMAMG00000018743	-	86	40.000	ENSMAMG00000001808	zbtb47b	79	40.000
ENSMAMG00000018743	-	87	34.146	ENSMAMG00000022206	-	75	34.146
ENSMAMG00000018743	-	81	37.226	ENSMAMG00000006312	-	94	33.493
ENSMAMG00000018743	-	78	40.506	ENSMAMG00000002731	znf1056	87	34.146
ENSMAMG00000018743	-	81	35.417	ENSMAMG00000017911	ZNF319	83	35.417
ENSMAMG00000018743	-	75	37.607	ENSMAMG00000014758	-	84	37.607
ENSMAMG00000018743	-	65	36.111	ENSMAMG00000002083	-	99	34.848
ENSMAMG00000018743	-	87	31.950	ENSMAMG00000019301	-	93	35.043
ENSMAMG00000018743	-	79	33.816	ENSMAMG00000018114	-	80	33.816
ENSMAMG00000018743	-	65	33.673	ENSMAMG00000021196	zgc:171929	51	34.694
ENSMAMG00000018743	-	78	30.769	ENSMAMG00000019385	-	76	30.392
ENSMAMG00000018743	-	92	31.308	ENSMAMG00000009817	-	71	41.333
ENSMAMG00000018743	-	84	35.882	ENSMAMG00000017946	-	77	43.662
ENSMAMG00000018743	-	77	36.429	ENSMAMG00000016484	-	97	34.524
ENSMAMG00000018743	-	74	40.000	ENSMAMG00000023490	-	52	40.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000018743	-	72	80.263	ENSG00000103495	MAZ	76	79.739	Homo_sapiens
ENSMAMG00000018743	-	72	80.263	ENSANAG00000036195	-	52	80.263	Aotus_nancymaae
ENSMAMG00000018743	-	72	66.286	ENSANAG00000037536	-	95	64.865	Aotus_nancymaae
ENSMAMG00000018743	-	72	80.263	ENSBTAG00000052323	MAZ	54	80.263	Bos_taurus
ENSMAMG00000018743	-	72	80.263	ENSCJAG00000007189	MAZ	51	80.263	Callithrix_jacchus
ENSMAMG00000018743	-	76	70.000	ENSCAFG00000016964	MAZ	51	70.000	Canis_familiaris
ENSMAMG00000018743	-	72	80.263	ENSCAFG00020017751	MAZ	54	80.263	Canis_lupus_dingo
ENSMAMG00000018743	-	72	80.263	ENSCHIG00000020711	MAZ	51	80.263	Capra_hircus
ENSMAMG00000018743	-	72	80.263	ENSCCAG00000037524	MAZ	54	80.263	Cebus_capucinus
ENSMAMG00000018743	-	72	80.263	ENSCATG00000033033	MAZ	52	80.263	Cercocebus_atys
ENSMAMG00000018743	-	76	70.000	ENSCSAG00000006110	MAZ	81	70.000	Chlorocebus_sabaeus
ENSMAMG00000018743	-	72	80.263	ENSCANG00000035162	MAZ	83	70.000	Colobus_angolensis_palliatus
ENSMAMG00000018743	-	74	80.263	ENSCGRG00001008879	Maz	54	80.263	Cricetulus_griseus_chok1gshd
ENSMAMG00000018743	-	76	69.668	ENSCGRG00000014850	-	99	69.668	Cricetulus_griseus_crigri
ENSMAMG00000018743	-	88	76.404	ENSCVAG00000015597	si:ch211-166g5.4	52	76.493	Cyprinodon_variegatus
ENSMAMG00000018743	-	90	75.812	ENSDARG00000063555	si:ch211-166g5.4	100	78.409	Danio_rerio
ENSMAMG00000018743	-	72	80.263	ENSEASG00005013172	MAZ	53	80.263	Equus_asinus_asinus
ENSMAMG00000018743	-	72	80.263	ENSECAG00000024341	MAZ	54	80.263	Equus_caballus
ENSMAMG00000018743	-	88	79.545	ENSELUG00000022514	si:ch211-166g5.4	79	87.387	Esox_lucius
ENSMAMG00000018743	-	88	84.733	ENSELUG00000024246	MAZ	52	85.932	Esox_lucius
ENSMAMG00000018743	-	72	80.263	ENSFCAG00000014146	MAZ	51	80.263	Felis_catus
ENSMAMG00000018743	-	72	52.133	ENSFDAG00000010852	-	99	52.133	Fukomys_damarensis
ENSMAMG00000018743	-	89	89.873	ENSFHEG00000000918	MAZ	97	89.873	Fundulus_heteroclitus
ENSMAMG00000018743	-	88	77.154	ENSGAFG00000000293	si:ch211-166g5.4	55	77.154	Gambusia_affinis
ENSMAMG00000018743	-	74	92.308	ENSGACG00000014840	maza	87	92.308	Gasterosteus_aculeatus
ENSMAMG00000018743	-	72	81.579	ENSGAGG00000008124	MAZ	82	70.909	Gopherus_agassizii
ENSMAMG00000018743	-	76	70.000	ENSHGLG00000018743	-	83	70.000	Heterocephalus_glaber_female
ENSMAMG00000018743	-	77	61.751	ENSHGLG00000011024	-	81	61.751	Heterocephalus_glaber_female
ENSMAMG00000018743	-	67	67.368	ENSHGLG00100017872	-	84	67.368	Heterocephalus_glaber_male
ENSMAMG00000018743	-	72	80.263	ENSSTOG00000027842	MAZ	83	70.000	Ictidomys_tridecemlineatus
ENSMAMG00000018743	-	72	80.263	ENSJJAG00000020922	-	83	70.000	Jaculus_jaculus
ENSMAMG00000018743	-	72	75.248	ENSLACG00000010161	MAZ	52	75.248	Latimeria_chalumnae
ENSMAMG00000018743	-	72	80.263	ENSMFAG00000040127	MAZ	83	70.000	Macaca_fascicularis
ENSMAMG00000018743	-	72	80.263	ENSMMUG00000019826	MAZ	62	80.263	Macaca_mulatta
ENSMAMG00000018743	-	72	80.263	ENSMNEG00000037329	MAZ	83	70.000	Macaca_nemestrina
ENSMAMG00000018743	-	73	80.263	ENSMLEG00000036147	-	74	80.263	Mandrillus_leucophaeus
ENSMAMG00000018743	-	72	80.263	ENSMICG00000030392	MAZ	54	80.263	Microcebus_murinus
ENSMAMG00000018743	-	74	80.263	ENSMOCG00000003611	Maz	54	80.263	Microtus_ochrogaster
ENSMAMG00000018743	-	72	80.263	ENSMUSG00000030678	Maz	54	80.263	Mus_musculus
ENSMAMG00000018743	-	72	80.263	MGP_PahariEiJ_G0013693	Maz	56	80.263	Mus_pahari
ENSMAMG00000018743	-	72	80.263	ENSODEG00000014451	MAZ	83	70.000	Octodon_degus
ENSMAMG00000018743	-	80	70.811	ENSOANG00000004112	-	77	78.981	Ornithorhynchus_anatinus
ENSMAMG00000018743	-	74	71.635	ENSOARG00000005520	MAZ	64	71.635	Ovis_aries
ENSMAMG00000018743	-	72	73.057	ENSPPAG00000041571	-	74	72.864	Pan_paniscus
ENSMAMG00000018743	-	72	80.263	ENSPPRG00000016750	-	54	80.263	Panthera_pardus
ENSMAMG00000018743	-	76	58.182	ENSPPRG00000011596	-	82	59.091	Panthera_pardus
ENSMAMG00000018743	-	72	80.263	ENSPTRG00000007968	MAZ	55	80.263	Pan_troglodytes
ENSMAMG00000018743	-	72	80.263	ENSPANG00000016381	-	83	70.000	Papio_anubis
ENSMAMG00000018743	-	94	79.705	ENSPKIG00000018202	-	96	80.597	Paramormyrops_kingsleyae
ENSMAMG00000018743	-	72	61.611	ENSPEMG00000008318	-	99	62.559	Peromyscus_maniculatus_bairdii
ENSMAMG00000018743	-	96	71.724	ENSPFOG00000005397	si:ch211-166g5.4	55	77.154	Poecilia_formosa
ENSMAMG00000018743	-	74	85.714	ENSPLAG00000017219	si:ch211-166g5.4	82	83.628	Poecilia_latipinna
ENSMAMG00000018743	-	74	85.714	ENSPMEG00000017552	si:ch211-166g5.4	82	83.628	Poecilia_mexicana
ENSMAMG00000018743	-	88	77.154	ENSPREG00000023113	si:ch211-166g5.4	55	76.404	Poecilia_reticulata
ENSMAMG00000018743	-	72	80.263	ENSPCOG00000022370	MAZ	54	80.263	Propithecus_coquereli
ENSMAMG00000018743	-	90	76.190	ENSPNAG00000004042	si:ch211-166g5.4	83	85.333	Pygocentrus_nattereri
ENSMAMG00000018743	-	72	80.263	ENSRBIG00000001823	MAZ	83	70.000	Rhinopithecus_bieti
ENSMAMG00000018743	-	72	80.263	ENSRROG00000026952	MAZ	83	70.000	Rhinopithecus_roxellana
ENSMAMG00000018743	-	72	80.263	ENSSBOG00000020791	-	83	70.000	Saimiri_boliviensis_boliviensis
ENSMAMG00000018743	-	89	80.156	ENSSFOG00015021699	si:ch211-166g5.4	76	80.545	Scleropages_formosus
ENSMAMG00000018743	-	72	81.579	ENSSPUG00000010618	MAZ	63	81.579	Sphenodon_punctatus
ENSMAMG00000018743	-	76	70.000	ENSTTRG00000005420	MAZ	55	70.000	Tursiops_truncatus
ENSMAMG00000018743	-	72	80.263	ENSUAMG00000004622	MAZ	83	70.000	Ursus_americanus
ENSMAMG00000018743	-	72	80.263	ENSVVUG00000026097	MAZ	83	70.000	Vulpes_vulpes
ENSMAMG00000018743	-	88	77.154	ENSXMAG00000023386	si:ch211-166g5.4	55	77.154	Xiphophorus_maculatus