EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000018758 (Gene tree)
Gene ID: 113128943
Gene Symbol: si:ch73-63e15.2
Alias: si:dkey-19f23.4
Full Name: strawberry notch homolog 2
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 47117 bases
Position: chrOOHQ01000036.1:8350114-8397230
Accession: 113128943
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000027910	ResIII	PF04851.15	4.3e-07	1	1
ENSMAMP00000027896	ResIII	PF04851.15	4.7e-07	1	1
ENSMAMP00000027892	ResIII	PF04851.15	4.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000028616	-	8125	XM_026304560	ENSMAMP00000027896	1586 (aa)	XP_026160345	UPI000E462343
ENSMAMT00000028631	-	7829	XM_026304564	ENSMAMP00000027910	1527 (aa)	XP_026160349	-
ENSMAMT00000028612	-	8209	XM_026304558	ENSMAMP00000027892	1614 (aa)	XP_026160343	UPI000E4642FF

Gene Model

Click here to download ENSMAMG00000018758's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000018758's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000018758	si:ch73-63e15.2	61	64.220	ENSMAMG00000005473	sbno1	76	59.959

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000018758	si:ch73-63e15.2	75	68.065	ENSG00000064932	SBNO2	88	68.349	Homo_sapiens
ENSMAMG00000018758	si:ch73-63e15.2	100	84.979	ENSAPOG00000003185	si:ch73-63e15.2	100	84.889	Acanthochromis_polyacanthus
ENSMAMG00000018758	si:ch73-63e15.2	100	85.955	ENSAOCG00000016581	si:ch73-63e15.2	100	85.761	Amphiprion_ocellaris
ENSMAMG00000018758	si:ch73-63e15.2	100	85.890	ENSAPEG00000008862	si:ch73-63e15.2	100	85.696	Amphiprion_percula
ENSMAMG00000018758	si:ch73-63e15.2	100	84.389	ENSATEG00000023838	si:ch73-63e15.2	99	87.953	Anabas_testudineus
ENSMAMG00000018758	si:ch73-63e15.2	75	72.041	ENSAPLG00000007158	SBNO2	90	72.041	Anas_platyrhynchos
ENSMAMG00000018758	si:ch73-63e15.2	75	67.466	ENSANAG00000026685	SBNO2	89	67.494	Aotus_nancymaae
ENSMAMG00000018758	si:ch73-63e15.2	99	79.789	ENSACLG00000005090	si:ch73-63e15.2	100	78.782	Astatotilapia_calliptera
ENSMAMG00000018758	si:ch73-63e15.2	77	81.250	ENSAMXG00000015881	si:ch73-63e15.2	86	81.250	Astyanax_mexicanus
ENSMAMG00000018758	si:ch73-63e15.2	78	77.349	ENSAMXG00000018868	sbno2a	96	80.145	Astyanax_mexicanus
ENSMAMG00000018758	si:ch73-63e15.2	75	69.416	ENSBTAG00000020780	SBNO2	88	69.119	Bos_taurus
ENSMAMG00000018758	si:ch73-63e15.2	74	70.026	ENSCAFG00000019543	SBNO2	90	66.162	Canis_familiaris
ENSMAMG00000018758	si:ch73-63e15.2	74	70.026	ENSCAFG00020017115	SBNO2	95	66.162	Canis_lupus_dingo
ENSMAMG00000018758	si:ch73-63e15.2	74	69.792	ENSCHIG00000026127	SBNO2	86	69.558	Capra_hircus
ENSMAMG00000018758	si:ch73-63e15.2	74	67.598	ENSCAPG00000005731	SBNO2	94	67.336	Cavia_aperea
ENSMAMG00000018758	si:ch73-63e15.2	74	67.476	ENSCPOG00000007477	SBNO2	87	66.952	Cavia_porcellus
ENSMAMG00000018758	si:ch73-63e15.2	75	67.551	ENSCCAG00000037518	SBNO2	89	67.579	Cebus_capucinus
ENSMAMG00000018758	si:ch73-63e15.2	75	68.520	ENSCATG00000037046	SBNO2	88	68.520	Cercocebus_atys
ENSMAMG00000018758	si:ch73-63e15.2	75	68.729	ENSCLAG00000010178	SBNO2	99	69.177	Chinchilla_lanigera
ENSMAMG00000018758	si:ch73-63e15.2	74	68.957	ENSCSAG00000012317	SBNO2	90	65.363	Chlorocebus_sabaeus
ENSMAMG00000018758	si:ch73-63e15.2	75	69.528	ENSCPBG00000008920	SBNO2	91	70.435	Chrysemys_picta_bellii
ENSMAMG00000018758	si:ch73-63e15.2	72	68.036	ENSCANG00000036745	SBNO2	96	68.036	Colobus_angolensis_palliatus
ENSMAMG00000018758	si:ch73-63e15.2	74	67.478	ENSCGRG00001023960	Sbno2	85	67.570	Cricetulus_griseus_chok1gshd
ENSMAMG00000018758	si:ch73-63e15.2	74	68.897	ENSCGRG00000011984	Sbno2	85	68.996	Cricetulus_griseus_crigri
ENSMAMG00000018758	si:ch73-63e15.2	77	86.616	ENSCSEG00000006856	si:ch73-63e15.2	98	90.118	Cynoglossus_semilaevis
ENSMAMG00000018758	si:ch73-63e15.2	100	76.923	ENSCVAG00000005663	si:ch73-63e15.2	89	81.871	Cyprinodon_variegatus
ENSMAMG00000018758	si:ch73-63e15.2	80	76.245	ENSDARG00000098801	sbno2a	97	73.708	Danio_rerio
ENSMAMG00000018758	si:ch73-63e15.2	94	79.665	ENSDARG00000016188	SBNO2	86	79.665	Danio_rerio
ENSMAMG00000018758	si:ch73-63e15.2	74	69.184	ENSDORG00000002916	Sbno2	88	67.581	Dipodomys_ordii
ENSMAMG00000018758	si:ch73-63e15.2	75	69.323	ENSEASG00005021621	SBNO2	89	69.435	Equus_asinus_asinus
ENSMAMG00000018758	si:ch73-63e15.2	75	69.152	ENSECAG00000011827	SBNO2	89	69.521	Equus_caballus
ENSMAMG00000018758	si:ch73-63e15.2	99	73.171	ENSELUG00000020457	si:ch73-63e15.2	91	77.846	Esox_lucius
ENSMAMG00000018758	si:ch73-63e15.2	75	71.722	ENSFALG00000013988	SBNO2	92	67.339	Ficedula_albicollis
ENSMAMG00000018758	si:ch73-63e15.2	72	67.407	ENSFDAG00000015186	SBNO2	86	67.309	Fukomys_damarensis
ENSMAMG00000018758	si:ch73-63e15.2	100	77.296	ENSFHEG00000022262	si:ch73-63e15.2	89	81.971	Fundulus_heteroclitus
ENSMAMG00000018758	si:ch73-63e15.2	75	87.762	ENSGMOG00000007542	si:ch73-63e15.2	96	87.762	Gadus_morhua
ENSMAMG00000018758	si:ch73-63e15.2	76	71.946	ENSGALG00000037522	SBNO2	86	71.862	Gallus_gallus
ENSMAMG00000018758	si:ch73-63e15.2	78	89.051	ENSGAFG00000004860	si:ch73-63e15.2	93	89.051	Gambusia_affinis
ENSMAMG00000018758	si:ch73-63e15.2	75	90.199	ENSGACG00000013190	si:ch73-63e15.2	95	90.199	Gasterosteus_aculeatus
ENSMAMG00000018758	si:ch73-63e15.2	76	71.899	ENSGAGG00000008348	SBNO2	87	71.814	Gopherus_agassizii
ENSMAMG00000018758	si:ch73-63e15.2	99	79.698	ENSHBUG00000010742	si:ch73-63e15.2	100	78.821	Haplochromis_burtoni
ENSMAMG00000018758	si:ch73-63e15.2	74	69.278	ENSHGLG00000008739	SBNO2	85	68.945	Heterocephalus_glaber_female
ENSMAMG00000018758	si:ch73-63e15.2	75	68.547	ENSHGLG00100005269	SBNO2	99	68.990	Heterocephalus_glaber_male
ENSMAMG00000018758	si:ch73-63e15.2	78	86.700	ENSHCOG00000000884	si:ch73-63e15.2	96	84.561	Hippocampus_comes
ENSMAMG00000018758	si:ch73-63e15.2	75	80.866	ENSIPUG00000000537	si:ch73-63e15.2	97	73.289	Ictalurus_punctatus
ENSMAMG00000018758	si:ch73-63e15.2	77	80.427	ENSIPUG00000019672	sbno2	99	76.715	Ictalurus_punctatus
ENSMAMG00000018758	si:ch73-63e15.2	74	69.391	ENSSTOG00000025832	SBNO2	90	65.891	Ictidomys_tridecemlineatus
ENSMAMG00000018758	si:ch73-63e15.2	75	65.722	ENSJJAG00000017397	Sbno2	89	63.852	Jaculus_jaculus
ENSMAMG00000018758	si:ch73-63e15.2	100	79.830	ENSKMAG00000005541	si:ch73-63e15.2	99	79.896	Kryptolebias_marmoratus
ENSMAMG00000018758	si:ch73-63e15.2	100	84.387	ENSLBEG00000025016	si:ch73-63e15.2	99	93.167	Labrus_bergylta
ENSMAMG00000018758	si:ch73-63e15.2	82	80.316	ENSLOCG00000004643	si:ch73-63e15.2	86	85.271	Lepisosteus_oculatus
ENSMAMG00000018758	si:ch73-63e15.2	73	66.021	ENSLAFG00000008824	SBNO2	89	65.963	Loxodonta_africana
ENSMAMG00000018758	si:ch73-63e15.2	75	66.923	ENSMFAG00000040030	SBNO2	90	66.923	Macaca_fascicularis
ENSMAMG00000018758	si:ch73-63e15.2	74	68.957	ENSMMUG00000010886	SBNO2	90	65.363	Macaca_mulatta
ENSMAMG00000018758	si:ch73-63e15.2	76	67.963	ENSMNEG00000039927	SBNO2	89	67.963	Macaca_nemestrina
ENSMAMG00000018758	si:ch73-63e15.2	68	69.340	ENSMLEG00000038556	SBNO2	90	69.426	Mandrillus_leucophaeus
ENSMAMG00000018758	si:ch73-63e15.2	99	80.105	ENSMZEG00005010682	si:ch73-63e15.2	100	78.769	Maylandia_zebra
ENSMAMG00000018758	si:ch73-63e15.2	75	72.232	ENSMGAG00000003801	SBNO2	90	72.328	Meleagris_gallopavo
ENSMAMG00000018758	si:ch73-63e15.2	74	69.217	ENSMAUG00000008034	Sbno2	85	69.580	Mesocricetus_auratus
ENSMAMG00000018758	si:ch73-63e15.2	75	68.123	ENSMICG00000013071	SBNO2	88	68.604	Microcebus_murinus
ENSMAMG00000018758	si:ch73-63e15.2	74	69.331	ENSMOCG00000010504	Sbno2	85	69.164	Microtus_ochrogaster
ENSMAMG00000018758	si:ch73-63e15.2	74	71.902	ENSMODG00000005382	SBNO2	96	63.312	Monodelphis_domestica
ENSMAMG00000018758	si:ch73-63e15.2	62	86.111	ENSMALG00000021831	si:ch73-63e15.2	99	86.111	Monopterus_albus
ENSMAMG00000018758	si:ch73-63e15.2	74	68.696	ENSMUSG00000035673	Sbno2	93	68.804	Mus_musculus
ENSMAMG00000018758	si:ch73-63e15.2	74	68.696	MGP_PahariEiJ_G0030976	Sbno2	85	68.924	Mus_pahari
ENSMAMG00000018758	si:ch73-63e15.2	74	68.783	MGP_SPRETEiJ_G0016381	Sbno2	90	69.010	Mus_spretus
ENSMAMG00000018758	si:ch73-63e15.2	64	71.515	ENSMPUG00000008747	SBNO2	99	67.338	Mustela_putorius_furo
ENSMAMG00000018758	si:ch73-63e15.2	74	68.609	ENSNGAG00000004308	Sbno2	91	65.495	Nannospalax_galili
ENSMAMG00000018758	si:ch73-63e15.2	81	89.608	ENSNBRG00000022968	si:ch73-63e15.2	99	90.643	Neolamprologus_brichardi
ENSMAMG00000018758	si:ch73-63e15.2	71	70.213	ENSNLEG00000001305	SBNO2	89	70.213	Nomascus_leucogenys
ENSMAMG00000018758	si:ch73-63e15.2	61	67.410	ENSMEUG00000013511	-	78	67.304	Notamacropus_eugenii
ENSMAMG00000018758	si:ch73-63e15.2	74	67.655	ENSOPRG00000017238	SBNO2	94	68.453	Ochotona_princeps
ENSMAMG00000018758	si:ch73-63e15.2	74	68.320	ENSODEG00000011822	SBNO2	85	68.111	Octodon_degus
ENSMAMG00000018758	si:ch73-63e15.2	100	79.831	ENSONIG00000002490	si:ch73-63e15.2	95	88.571	Oreochromis_niloticus
ENSMAMG00000018758	si:ch73-63e15.2	100	77.243	ENSORLG00000000913	si:ch73-63e15.2	91	81.406	Oryzias_latipes
ENSMAMG00000018758	si:ch73-63e15.2	100	77.178	ENSORLG00020010978	si:ch73-63e15.2	100	76.658	Oryzias_latipes_hni
ENSMAMG00000018758	si:ch73-63e15.2	100	77.113	ENSORLG00015000202	si:ch73-63e15.2	100	76.593	Oryzias_latipes_hsok
ENSMAMG00000018758	si:ch73-63e15.2	100	76.456	ENSOMEG00000000359	si:ch73-63e15.2	100	76.438	Oryzias_melastigma
ENSMAMG00000018758	si:ch73-63e15.2	74	66.840	ENSOARG00000011130	SBNO2	86	66.900	Ovis_aries
ENSMAMG00000018758	si:ch73-63e15.2	75	67.063	ENSPPAG00000032482	SBNO2	90	67.345	Pan_paniscus
ENSMAMG00000018758	si:ch73-63e15.2	76	67.428	ENSPTRG00000010185	SBNO2	89	68.380	Pan_troglodytes
ENSMAMG00000018758	si:ch73-63e15.2	75	65.013	ENSPANG00000009658	SBNO2	88	64.756	Papio_anubis
ENSMAMG00000018758	si:ch73-63e15.2	66	79.102	ENSPKIG00000009707	-	84	79.102	Paramormyrops_kingsleyae
ENSMAMG00000018758	si:ch73-63e15.2	89	84.703	ENSPKIG00000024201	si:ch73-63e15.2	84	84.410	Paramormyrops_kingsleyae
ENSMAMG00000018758	si:ch73-63e15.2	63	73.503	ENSPSIG00000002852	SBNO2	99	73.401	Pelodiscus_sinensis
ENSMAMG00000018758	si:ch73-63e15.2	76	86.395	ENSPMGG00000014375	si:ch73-63e15.2	95	85.969	Periophthalmus_magnuspinnatus
ENSMAMG00000018758	si:ch73-63e15.2	74	67.483	ENSPEMG00000024122	Sbno2	85	68.014	Peromyscus_maniculatus_bairdii
ENSMAMG00000018758	si:ch73-63e15.2	73	71.922	ENSPCIG00000011264	SBNO2	96	63.723	Phascolarctos_cinereus
ENSMAMG00000018758	si:ch73-63e15.2	100	76.332	ENSPFOG00000004096	si:ch73-63e15.2	100	87.392	Poecilia_formosa
ENSMAMG00000018758	si:ch73-63e15.2	100	76.741	ENSPLAG00000014653	si:ch73-63e15.2	89	81.765	Poecilia_latipinna
ENSMAMG00000018758	si:ch73-63e15.2	100	75.972	ENSPMEG00000002129	si:ch73-63e15.2	96	84.323	Poecilia_mexicana
ENSMAMG00000018758	si:ch73-63e15.2	100	75.756	ENSPREG00000006755	si:ch73-63e15.2	100	75.650	Poecilia_reticulata
ENSMAMG00000018758	si:ch73-63e15.2	67	69.720	ENSPCAG00000012256	SBNO2	77	69.431	Procavia_capensis
ENSMAMG00000018758	si:ch73-63e15.2	75	62.137	ENSPCOG00000015216	SBNO2	88	62.340	Propithecus_coquereli
ENSMAMG00000018758	si:ch73-63e15.2	100	79.896	ENSPNYG00000019926	si:ch73-63e15.2	99	80.039	Pundamilia_nyererei
ENSMAMG00000018758	si:ch73-63e15.2	76	82.806	ENSPNAG00000020260	si:ch73-63e15.2	84	82.806	Pygocentrus_nattereri
ENSMAMG00000018758	si:ch73-63e15.2	75	79.931	ENSPNAG00000026609	sbno2a	99	70.424	Pygocentrus_nattereri
ENSMAMG00000018758	si:ch73-63e15.2	74	69.164	ENSRNOG00000013987	Sbno2	89	69.325	Rattus_norvegicus
ENSMAMG00000018758	si:ch73-63e15.2	69	66.697	ENSRBIG00000009740	SBNO2	86	68.290	Rhinopithecus_bieti
ENSMAMG00000018758	si:ch73-63e15.2	66	70.609	ENSRROG00000044671	SBNO2	85	71.394	Rhinopithecus_roxellana
ENSMAMG00000018758	si:ch73-63e15.2	75	67.466	ENSSBOG00000023562	SBNO2	89	67.494	Saimiri_boliviensis_boliviensis
ENSMAMG00000018758	si:ch73-63e15.2	73	71.730	ENSSHAG00000010241	SBNO2	97	71.466	Sarcophilus_harrisii
ENSMAMG00000018758	si:ch73-63e15.2	77	82.293	ENSSFOG00015005861	si:ch73-63e15.2	96	82.293	Scleropages_formosus
ENSMAMG00000018758	si:ch73-63e15.2	100	84.819	ENSSMAG00000012489	si:ch73-63e15.2	100	85.659	Scophthalmus_maximus
ENSMAMG00000018758	si:ch73-63e15.2	100	86.864	ENSSDUG00000003527	si:ch73-63e15.2	100	86.993	Seriola_dumerili
ENSMAMG00000018758	si:ch73-63e15.2	100	86.671	ENSSLDG00000004623	si:ch73-63e15.2	100	86.800	Seriola_lalandi_dorsalis
ENSMAMG00000018758	si:ch73-63e15.2	100	85.493	ENSSPAG00000017717	si:ch73-63e15.2	100	85.816	Stegastes_partitus
ENSMAMG00000018758	si:ch73-63e15.2	75	68.921	ENSSSCG00000030042	SBNO2	90	68.750	Sus_scrofa
ENSMAMG00000018758	si:ch73-63e15.2	72	89.440	ENSTRUG00000018193	si:ch73-63e15.2	86	90.302	Takifugu_rubripes
ENSMAMG00000018758	si:ch73-63e15.2	68	70.465	ENSUAMG00000006568	SBNO2	93	71.594	Ursus_americanus
ENSMAMG00000018758	si:ch73-63e15.2	74	70.026	ENSVVUG00000022823	SBNO2	89	66.186	Vulpes_vulpes
ENSMAMG00000018758	si:ch73-63e15.2	68	75.147	ENSXETG00000021579	sbno2	91	76.113	Xenopus_tropicalis
ENSMAMG00000018758	si:ch73-63e15.2	89	86.515	ENSXCOG00000009209	si:ch73-63e15.2	93	91.458	Xiphophorus_couchianus
ENSMAMG00000018758	si:ch73-63e15.2	100	76.504	ENSXMAG00000012091	si:ch73-63e15.2	91	89.937	Xiphophorus_maculatus