EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000018839 (Gene tree)
Gene ID: -
Gene Symbol: lsm8
Alias: -
Full Name: LSM8 homolog%2C U6 small nuclear RNA associated
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 1424 bases
Position: chrOOHQ01000056.1:15043819-15045242
Accession: ZDB-GENE-070629-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000028016	LSM	PF01423.22	1.5e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000028742	-	228	-	ENSMAMP00000028016	75 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000018839's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000018839's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000018839	lsm8	100	97.333	ENSG00000128534	LSM8	100	97.333	Homo_sapiens
ENSMAMG00000018839	lsm8	100	100.000	ENSAPOG00000008649	lsm8	78	100.000	Acanthochromis_polyacanthus
ENSMAMG00000018839	lsm8	100	97.333	ENSAMEG00000001162	LSM8	78	97.333	Ailuropoda_melanoleuca
ENSMAMG00000018839	lsm8	100	100.000	ENSACIG00000014694	lsm8	100	100.000	Amphilophus_citrinellus
ENSMAMG00000018839	lsm8	100	100.000	ENSAOCG00000013926	lsm8	78	100.000	Amphiprion_ocellaris
ENSMAMG00000018839	lsm8	100	100.000	ENSAPEG00000023502	lsm8	78	100.000	Amphiprion_percula
ENSMAMG00000018839	lsm8	100	100.000	ENSATEG00000023432	lsm8	100	100.000	Anabas_testudineus
ENSMAMG00000018839	lsm8	100	98.667	ENSAPLG00000005115	LSM8	76	98.667	Anas_platyrhynchos
ENSMAMG00000018839	lsm8	100	97.333	ENSANAG00000027771	LSM8	100	94.595	Aotus_nancymaae
ENSMAMG00000018839	lsm8	100	100.000	ENSACLG00000011253	lsm8	78	100.000	Astatotilapia_calliptera
ENSMAMG00000018839	lsm8	100	98.667	ENSAMXG00000042902	lsm8	78	98.667	Astyanax_mexicanus
ENSMAMG00000018839	lsm8	100	97.333	ENSBTAG00000012649	LSM8	78	97.333	Bos_taurus
ENSMAMG00000018839	lsm8	97	57.534	WBGene00003082	lsm-8	74	57.534	Caenorhabditis_elegans
ENSMAMG00000018839	lsm8	100	97.333	ENSCJAG00000046406	LSM8	100	94.595	Callithrix_jacchus
ENSMAMG00000018839	lsm8	97	98.630	ENSCAFG00000016459	LSM8	74	98.630	Canis_familiaris
ENSMAMG00000018839	lsm8	100	97.333	ENSCAFG00020007643	-	78	97.333	Canis_lupus_dingo
ENSMAMG00000018839	lsm8	85	96.875	ENSCAFG00020012800	-	50	96.875	Canis_lupus_dingo
ENSMAMG00000018839	lsm8	100	97.333	ENSCHIG00000014201	LSM8	80	97.333	Capra_hircus
ENSMAMG00000018839	lsm8	100	97.333	ENSTSYG00000032434	LSM8	78	97.333	Carlito_syrichta
ENSMAMG00000018839	lsm8	99	95.946	ENSCAPG00000008253	LSM8	100	95.946	Cavia_aperea
ENSMAMG00000018839	lsm8	100	97.333	ENSCPOG00000035673	LSM8	78	97.333	Cavia_porcellus
ENSMAMG00000018839	lsm8	100	97.333	ENSCCAG00000021329	LSM8	100	94.595	Cebus_capucinus
ENSMAMG00000018839	lsm8	100	97.333	ENSCATG00000045302	LSM8	100	94.595	Cercocebus_atys
ENSMAMG00000018839	lsm8	100	97.333	ENSCLAG00000003726	LSM8	78	97.333	Chinchilla_lanigera
ENSMAMG00000018839	lsm8	100	96.000	ENSCSAG00000019007	-	78	96.000	Chlorocebus_sabaeus
ENSMAMG00000018839	lsm8	100	97.333	ENSCSAG00000010802	-	78	97.333	Chlorocebus_sabaeus
ENSMAMG00000018839	lsm8	100	97.333	ENSCPBG00000008154	LSM8	77	97.333	Chrysemys_picta_bellii
ENSMAMG00000018839	lsm8	100	78.667	ENSCING00000024877	-	78	78.667	Ciona_intestinalis
ENSMAMG00000018839	lsm8	100	97.333	ENSCANG00000040728	LSM8	100	94.595	Colobus_angolensis_palliatus
ENSMAMG00000018839	lsm8	100	97.333	ENSCGRG00001000450	Lsm8	78	97.333	Cricetulus_griseus_chok1gshd
ENSMAMG00000018839	lsm8	100	97.333	ENSCGRG00000005587	Lsm8	88	97.333	Cricetulus_griseus_crigri
ENSMAMG00000018839	lsm8	96	98.611	ENSCSEG00000004164	lsm8	79	98.611	Cynoglossus_semilaevis
ENSMAMG00000018839	lsm8	100	98.667	ENSCVAG00000020547	lsm8	78	98.667	Cyprinodon_variegatus
ENSMAMG00000018839	lsm8	100	97.333	ENSDARG00000091656	lsm8	78	97.333	Danio_rerio
ENSMAMG00000018839	lsm8	100	97.333	ENSDNOG00000034613	LSM8	78	97.333	Dasypus_novemcinctus
ENSMAMG00000018839	lsm8	100	97.333	ENSDORG00000027868	Lsm8	78	97.333	Dipodomys_ordii
ENSMAMG00000018839	lsm8	97	72.603	FBgn0035271	CG2021	77	72.603	Drosophila_melanogaster
ENSMAMG00000018839	lsm8	100	98.667	ENSETEG00000011594	LSM8	78	98.667	Echinops_telfairi
ENSMAMG00000018839	lsm8	99	93.243	ENSEBUG00000012017	lsm8	100	93.243	Eptatretus_burgeri
ENSMAMG00000018839	lsm8	100	97.333	ENSECAG00000024025	LSM8	71	97.222	Equus_caballus
ENSMAMG00000018839	lsm8	100	96.000	ENSELUG00000010138	lsm8	78	96.000	Esox_lucius
ENSMAMG00000018839	lsm8	100	97.333	ENSFCAG00000036620	-	78	97.333	Felis_catus
ENSMAMG00000018839	lsm8	89	71.642	ENSFCAG00000044794	-	66	71.642	Felis_catus
ENSMAMG00000018839	lsm8	100	98.667	ENSFALG00000010023	LSM8	78	98.667	Ficedula_albicollis
ENSMAMG00000018839	lsm8	100	97.333	ENSFDAG00000019530	LSM8	78	97.333	Fukomys_damarensis
ENSMAMG00000018839	lsm8	100	100.000	ENSFHEG00000013729	lsm8	78	100.000	Fundulus_heteroclitus
ENSMAMG00000018839	lsm8	100	98.667	ENSGALG00000009110	LSM8	78	98.667	Gallus_gallus
ENSMAMG00000018839	lsm8	100	98.667	ENSGAFG00000001135	lsm8	78	98.667	Gambusia_affinis
ENSMAMG00000018839	lsm8	100	97.333	ENSGAGG00000017366	LSM8	78	97.333	Gopherus_agassizii
ENSMAMG00000018839	lsm8	100	97.333	ENSGGOG00000041883	LSM8	78	97.333	Gorilla_gorilla
ENSMAMG00000018839	lsm8	100	100.000	ENSHBUG00000003646	lsm8	78	100.000	Haplochromis_burtoni
ENSMAMG00000018839	lsm8	100	90.667	ENSHGLG00000019782	-	78	90.667	Heterocephalus_glaber_female
ENSMAMG00000018839	lsm8	63	100.000	ENSHGLG00000001988	-	68	100.000	Heterocephalus_glaber_female
ENSMAMG00000018839	lsm8	97	95.890	ENSHGLG00100003934	-	73	95.890	Heterocephalus_glaber_male
ENSMAMG00000018839	lsm8	100	92.000	ENSHGLG00100012166	-	78	92.000	Heterocephalus_glaber_male
ENSMAMG00000018839	lsm8	100	98.667	ENSHCOG00000005037	lsm8	78	98.667	Hippocampus_comes
ENSMAMG00000018839	lsm8	100	98.667	ENSIPUG00000019811	NAA38	78	98.667	Ictalurus_punctatus
ENSMAMG00000018839	lsm8	100	97.333	ENSSTOG00000009039	LSM8	78	97.333	Ictidomys_tridecemlineatus
ENSMAMG00000018839	lsm8	100	84.000	ENSSTOG00000034801	-	69	84.000	Ictidomys_tridecemlineatus
ENSMAMG00000018839	lsm8	100	97.333	ENSJJAG00000009031	Lsm8	77	97.333	Jaculus_jaculus
ENSMAMG00000018839	lsm8	100	100.000	ENSKMAG00000018983	lsm8	78	100.000	Kryptolebias_marmoratus
ENSMAMG00000018839	lsm8	100	96.000	ENSLACG00000010231	LSM8	78	96.000	Latimeria_chalumnae
ENSMAMG00000018839	lsm8	100	97.333	ENSLOCG00000015580	lsm8	78	97.333	Lepisosteus_oculatus
ENSMAMG00000018839	lsm8	100	97.333	ENSLAFG00000011242	LSM8	77	97.333	Loxodonta_africana
ENSMAMG00000018839	lsm8	100	94.667	ENSMFAG00000013044	-	78	94.667	Macaca_fascicularis
ENSMAMG00000018839	lsm8	100	97.333	ENSMFAG00000035798	LSM8	100	94.595	Macaca_fascicularis
ENSMAMG00000018839	lsm8	100	97.333	ENSMMUG00000046401	LSM8	100	94.595	Macaca_mulatta
ENSMAMG00000018839	lsm8	100	97.333	ENSMNEG00000036764	-	100	94.595	Macaca_nemestrina
ENSMAMG00000018839	lsm8	100	94.667	ENSMNEG00000011141	-	100	94.667	Macaca_nemestrina
ENSMAMG00000018839	lsm8	100	81.333	ENSMLEG00000039324	-	76	81.333	Mandrillus_leucophaeus
ENSMAMG00000018839	lsm8	100	97.333	ENSMLEG00000035828	-	100	94.595	Mandrillus_leucophaeus
ENSMAMG00000018839	lsm8	100	100.000	ENSMZEG00005019138	lsm8	78	100.000	Maylandia_zebra
ENSMAMG00000018839	lsm8	100	98.667	ENSMGAG00000008808	LSM8	78	98.667	Meleagris_gallopavo
ENSMAMG00000018839	lsm8	100	76.000	ENSMAUG00000015356	-	75	76.000	Mesocricetus_auratus
ENSMAMG00000018839	lsm8	99	87.838	ENSMAUG00000020287	-	100	87.838	Mesocricetus_auratus
ENSMAMG00000018839	lsm8	100	89.333	ENSMAUG00000015721	-	78	89.333	Mesocricetus_auratus
ENSMAMG00000018839	lsm8	100	97.333	ENSMICG00000042730	LSM8	78	97.333	Microcebus_murinus
ENSMAMG00000018839	lsm8	100	97.333	ENSMOCG00000001688	Lsm8	78	97.333	Microtus_ochrogaster
ENSMAMG00000018839	lsm8	100	100.000	ENSMMOG00000006046	lsm8	100	100.000	Mola_mola
ENSMAMG00000018839	lsm8	97	85.333	ENSMODG00000015729	LSM8	96	85.333	Monodelphis_domestica
ENSMAMG00000018839	lsm8	100	100.000	ENSMALG00000000405	lsm8	78	100.000	Monopterus_albus
ENSMAMG00000018839	lsm8	100	97.333	MGP_CAROLIEiJ_G0028125	-	78	97.333	Mus_caroli
ENSMAMG00000018839	lsm8	100	97.333	ENSMUSG00000044155	Lsm8	78	97.333	Mus_musculus
ENSMAMG00000018839	lsm8	100	97.333	MGP_PahariEiJ_G0021881	Lsm8	100	97.333	Mus_pahari
ENSMAMG00000018839	lsm8	100	97.333	MGP_SPRETEiJ_G0029125	-	78	97.333	Mus_spretus
ENSMAMG00000018839	lsm8	100	97.333	ENSMLUG00000006837	-	78	97.333	Myotis_lucifugus
ENSMAMG00000018839	lsm8	100	96.000	ENSMLUG00000027762	-	78	96.000	Myotis_lucifugus
ENSMAMG00000018839	lsm8	100	97.333	ENSNGAG00000016554	Lsm8	78	97.333	Nannospalax_galili
ENSMAMG00000018839	lsm8	100	100.000	ENSNBRG00000014441	lsm8	78	100.000	Neolamprologus_brichardi
ENSMAMG00000018839	lsm8	100	97.333	ENSNLEG00000011768	LSM8	78	97.333	Nomascus_leucogenys
ENSMAMG00000018839	lsm8	100	84.000	ENSMEUG00000007801	LSM8	78	84.000	Notamacropus_eugenii
ENSMAMG00000018839	lsm8	100	97.333	ENSOPRG00000014809	LSM8	88	97.333	Ochotona_princeps
ENSMAMG00000018839	lsm8	100	97.333	ENSODEG00000000418	-	78	97.333	Octodon_degus
ENSMAMG00000018839	lsm8	87	81.538	ENSODEG00000020290	-	76	81.538	Octodon_degus
ENSMAMG00000018839	lsm8	100	97.333	ENSOANG00000014536	LSM8	78	97.333	Ornithorhynchus_anatinus
ENSMAMG00000018839	lsm8	100	97.333	ENSOCUG00000017359	LSM8	77	97.333	Oryctolagus_cuniculus
ENSMAMG00000018839	lsm8	96	100.000	ENSORLG00000017432	lsm8	77	100.000	Oryzias_latipes
ENSMAMG00000018839	lsm8	96	100.000	ENSORLG00020004376	lsm8	77	100.000	Oryzias_latipes_hni
ENSMAMG00000018839	lsm8	100	100.000	ENSORLG00015003757	lsm8	78	100.000	Oryzias_latipes_hsok
ENSMAMG00000018839	lsm8	92	100.000	ENSOMEG00000022509	lsm8	83	96.000	Oryzias_melastigma
ENSMAMG00000018839	lsm8	100	97.333	ENSOGAG00000013377	LSM8	78	97.333	Otolemur_garnettii
ENSMAMG00000018839	lsm8	100	97.333	ENSOARG00000017974	LSM8	78	97.333	Ovis_aries
ENSMAMG00000018839	lsm8	100	97.333	ENSPPAG00000043228	-	100	97.333	Pan_paniscus
ENSMAMG00000018839	lsm8	100	97.333	ENSPPRG00000006444	LSM8	78	97.333	Panthera_pardus
ENSMAMG00000018839	lsm8	100	97.333	ENSPTIG00000004722	LSM8	78	97.333	Panthera_tigris_altaica
ENSMAMG00000018839	lsm8	100	97.333	ENSPTRG00000046596	-	100	97.333	Pan_troglodytes
ENSMAMG00000018839	lsm8	100	93.333	ENSPANG00000019395	-	78	93.333	Papio_anubis
ENSMAMG00000018839	lsm8	100	97.333	ENSPANG00000035470	-	100	94.595	Papio_anubis
ENSMAMG00000018839	lsm8	100	97.333	ENSPKIG00000006092	lsm8	76	97.333	Paramormyrops_kingsleyae
ENSMAMG00000018839	lsm8	100	97.333	ENSPSIG00000017054	LSM8	100	97.333	Pelodiscus_sinensis
ENSMAMG00000018839	lsm8	100	100.000	ENSPMGG00000016442	lsm8	100	100.000	Periophthalmus_magnuspinnatus
ENSMAMG00000018839	lsm8	99	94.595	ENSPEMG00000009153	Lsm8	100	94.595	Peromyscus_maniculatus_bairdii
ENSMAMG00000018839	lsm8	96	98.611	ENSPCIG00000021467	LSM8	76	98.611	Phascolarctos_cinereus
ENSMAMG00000018839	lsm8	100	98.667	ENSPFOG00000012340	lsm8	78	98.667	Poecilia_formosa
ENSMAMG00000018839	lsm8	100	98.667	ENSPLAG00000000516	lsm8	78	98.667	Poecilia_latipinna
ENSMAMG00000018839	lsm8	100	98.667	ENSPMEG00000022567	lsm8	78	98.667	Poecilia_mexicana
ENSMAMG00000018839	lsm8	97	87.500	ENSPREG00000005527	lsm8	72	87.500	Poecilia_reticulata
ENSMAMG00000018839	lsm8	100	97.333	ENSPPYG00000017942	LSM8	78	97.333	Pongo_abelii
ENSMAMG00000018839	lsm8	100	97.333	ENSPCOG00000003309	-	78	97.333	Propithecus_coquereli
ENSMAMG00000018839	lsm8	99	72.973	ENSPCOG00000017982	-	74	72.973	Propithecus_coquereli
ENSMAMG00000018839	lsm8	100	96.000	ENSPVAG00000000990	LSM8	88	96.000	Pteropus_vampyrus
ENSMAMG00000018839	lsm8	100	100.000	ENSPNYG00000011448	lsm8	78	100.000	Pundamilia_nyererei
ENSMAMG00000018839	lsm8	100	98.667	ENSPNAG00000010252	lsm8	78	98.667	Pygocentrus_nattereri
ENSMAMG00000018839	lsm8	100	97.333	ENSRNOG00000058677	Lsm8	78	97.333	Rattus_norvegicus
ENSMAMG00000018839	lsm8	100	97.333	ENSRBIG00000032851	LSM8	100	94.595	Rhinopithecus_bieti
ENSMAMG00000018839	lsm8	100	97.333	ENSRROG00000039618	LSM8	100	94.595	Rhinopithecus_roxellana
ENSMAMG00000018839	lsm8	100	97.333	ENSSBOG00000023223	LSM8	100	94.595	Saimiri_boliviensis_boliviensis
ENSMAMG00000018839	lsm8	100	97.333	ENSSHAG00000018435	-	78	97.333	Sarcophilus_harrisii
ENSMAMG00000018839	lsm8	100	96.000	ENSSFOG00015004412	lsm8	78	96.000	Scleropages_formosus
ENSMAMG00000018839	lsm8	100	97.333	ENSSMAG00000009458	lsm8	100	97.333	Scophthalmus_maximus
ENSMAMG00000018839	lsm8	100	100.000	ENSSDUG00000014702	lsm8	78	100.000	Seriola_dumerili
ENSMAMG00000018839	lsm8	100	100.000	ENSSLDG00000016870	lsm8	100	100.000	Seriola_lalandi_dorsalis
ENSMAMG00000018839	lsm8	96	97.222	ENSSARG00000009628	-	100	97.222	Sorex_araneus
ENSMAMG00000018839	lsm8	100	97.333	ENSSPUG00000017419	LSM8	78	97.333	Sphenodon_punctatus
ENSMAMG00000018839	lsm8	100	100.000	ENSSPAG00000021422	lsm8	78	100.000	Stegastes_partitus
ENSMAMG00000018839	lsm8	100	97.333	ENSSSCG00000021652	LSM8	78	97.333	Sus_scrofa
ENSMAMG00000018839	lsm8	100	98.667	ENSTGUG00000004730	-	78	98.667	Taeniopygia_guttata
ENSMAMG00000018839	lsm8	100	97.333	ENSTGUG00000016823	-	78	97.333	Taeniopygia_guttata
ENSMAMG00000018839	lsm8	100	100.000	ENSTRUG00000025192	lsm8	78	100.000	Takifugu_rubripes
ENSMAMG00000018839	lsm8	100	100.000	ENSTNIG00000002864	lsm8	78	100.000	Tetraodon_nigroviridis
ENSMAMG00000018839	lsm8	100	97.333	ENSTTRG00000001023	LSM8	78	97.333	Tursiops_truncatus
ENSMAMG00000018839	lsm8	100	97.333	ENSUAMG00000006943	-	78	97.333	Ursus_americanus
ENSMAMG00000018839	lsm8	100	97.333	ENSUMAG00000003073	LSM8	80	97.333	Ursus_maritimus
ENSMAMG00000018839	lsm8	100	97.333	ENSVPAG00000001530	LSM8	78	97.333	Vicugna_pacos
ENSMAMG00000018839	lsm8	100	94.667	ENSVVUG00000013248	-	82	94.667	Vulpes_vulpes
ENSMAMG00000018839	lsm8	100	97.333	ENSXETG00000021829	lsm8	77	97.333	Xenopus_tropicalis
ENSMAMG00000018839	lsm8	100	97.333	ENSXCOG00000012938	lsm8	79	97.333	Xiphophorus_couchianus
ENSMAMG00000018839	lsm8	100	98.667	ENSXMAG00000025919	lsm8	78	98.667	Xiphophorus_maculatus