EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000018920 (Gene tree)
Gene ID: 113130808
Gene Symbol: -
Alias: -
Full Name: zinc finger matrin-type protein 1-like
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 7026 bases
Position: chrOOHQ01000082.1:19724414-19731439
Accession: 113130808
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000028135	zf-met	PF12874.7	6e-27	1	4
ENSMAMP00000028135	zf-met	PF12874.7	6e-27	2	4
ENSMAMP00000028135	zf-met	PF12874.7	6e-27	3	4
ENSMAMP00000028135	zf-met	PF12874.7	6e-27	4	4
ENSMAMP00000028129	zf-met	PF12874.7	5.2e-23	1	3
ENSMAMP00000028129	zf-met	PF12874.7	5.2e-23	2	3
ENSMAMP00000028129	zf-met	PF12874.7	5.2e-23	3	3
ENSMAMP00000028135	zf-C2H2_jaz	PF12171.8	8.3e-18	1	2
ENSMAMP00000028135	zf-C2H2_jaz	PF12171.8	8.3e-18	2	2
ENSMAMP00000028129	zf-C2H2_jaz	PF12171.8	2.7e-17	1	2
ENSMAMP00000028129	zf-C2H2_jaz	PF12171.8	2.7e-17	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000028867	-	1857	-	ENSMAMP00000028135	609 (aa)	XP_026163461	UPI000E45CD12
ENSMAMT00000028861	-	1978	-	ENSMAMP00000028129	508 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000018920's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000018920's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000018920	-	100	56.423	ENSACIG00000003672	-	99	57.093	Amphilophus_citrinellus
ENSMAMG00000018920	-	98	68.000	ENSAPEG00000002169	-	97	69.920	Amphiprion_percula
ENSMAMG00000018920	-	79	54.183	ENSGAFG00000021491	-	70	50.512	Gambusia_affinis
ENSMAMG00000018920	-	100	50.980	ENSKMAG00000018937	-	64	54.436	Kryptolebias_marmoratus
ENSMAMG00000018920	-	98	58.200	ENSNBRG00000018883	-	100	59.052	Neolamprologus_brichardi
ENSMAMG00000018920	-	72	58.549	ENSONIG00000020374	-	80	60.614	Oreochromis_niloticus
ENSMAMG00000018920	-	65	60.050	ENSORLG00000026368	-	57	66.972	Oryzias_latipes
ENSMAMG00000018920	-	66	59.268	ENSORLG00020000211	-	72	58.473	Oryzias_latipes_hni
ENSMAMG00000018920	-	67	58.394	ENSORLG00015004724	-	100	49.433	Oryzias_latipes_hsok
ENSMAMG00000018920	-	100	49.836	ENSOMEG00000002792	-	100	47.565	Oryzias_melastigma
ENSMAMG00000018920	-	67	45.497	ENSPKIG00000016531	-	70	45.814	Paramormyrops_kingsleyae
ENSMAMG00000018920	-	100	46.191	ENSPFOG00000010723	-	57	58.912	Poecilia_formosa
ENSMAMG00000018920	-	100	46.029	ENSPLAG00000012038	-	60	58.912	Poecilia_latipinna
ENSMAMG00000018920	-	100	45.705	ENSPMEG00000020927	-	71	52.812	Poecilia_mexicana
ENSMAMG00000018920	-	99	44.752	ENSPREG00000020523	-	100	43.808	Poecilia_reticulata
ENSMAMG00000018920	-	98	58.483	ENSPNYG00000003309	-	99	56.483	Pundamilia_nyererei
ENSMAMG00000018920	-	97	67.617	ENSSLDG00000017802	-	100	67.785	Seriola_lalandi_dorsalis
ENSMAMG00000018920	-	99	47.732	ENSXMAG00000002135	-	70	52.871	Xiphophorus_maculatus