EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000018988 (Gene tree)
Gene ID: 113139192
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 4857 bases
Position: chrOOHQ01000039.1:25289944-25294800
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000028239	zf-C2H2	PF00096.26	6.2e-12	1	2
ENSMAMP00000028239	zf-C2H2	PF00096.26	6.2e-12	2	2
ENSMAMP00000028239	zf-met	PF12874.7	8.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000028977	-	1149	-	ENSMAMP00000028239	382 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000018988's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000018988's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000018988	-	68	40.000	ENSMAMG00000013419	prdm5	85	42.105
ENSMAMG00000018988	-	52	49.315	ENSMAMG00000018114	-	72	48.438
ENSMAMG00000018988	-	100	74.010	ENSMAMG00000013212	prdm12b	100	73.580

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000018988	-	86	80.952	ENSG00000130711	PRDM12	88	80.952	Homo_sapiens
ENSMAMG00000018988	-	100	66.667	ENSAPOG00000018234	-	100	66.418	Acanthochromis_polyacanthus
ENSMAMG00000018988	-	100	74.020	ENSAPOG00000016051	prdm12b	100	73.529	Acanthochromis_polyacanthus
ENSMAMG00000018988	-	86	80.967	ENSAMEG00000016234	PRDM12	99	80.967	Ailuropoda_melanoleuca
ENSMAMG00000018988	-	100	74.627	ENSACIG00000019578	prdm12b	100	74.194	Amphilophus_citrinellus
ENSMAMG00000018988	-	100	86.466	ENSACIG00000005193	-	100	84.925	Amphilophus_citrinellus
ENSMAMG00000018988	-	100	75.312	ENSAOCG00000015040	prdm12b	100	74.813	Amphiprion_ocellaris
ENSMAMG00000018988	-	100	87.435	ENSAPEG00000022849	-	99	84.817	Amphiprion_percula
ENSMAMG00000018988	-	100	75.879	ENSAPEG00000015092	prdm12b	100	75.377	Amphiprion_percula
ENSMAMG00000018988	-	100	81.235	ENSATEG00000014595	-	96	89.086	Anabas_testudineus
ENSMAMG00000018988	-	86	80.952	ENSANAG00000020616	PRDM12	95	80.952	Aotus_nancymaae
ENSMAMG00000018988	-	100	89.394	ENSACLG00000007631	-	100	87.879	Astatotilapia_calliptera
ENSMAMG00000018988	-	100	77.807	ENSACLG00000011876	prdm12b	100	77.546	Astatotilapia_calliptera
ENSMAMG00000018988	-	100	78.426	ENSAMXG00000033665	prdm12b	100	77.157	Astyanax_mexicanus
ENSMAMG00000018988	-	100	78.442	ENSAMXG00000008540	PRDM12	100	76.425	Astyanax_mexicanus
ENSMAMG00000018988	-	86	81.250	ENSBTAG00000023797	PRDM12	90	81.250	Bos_taurus
ENSMAMG00000018988	-	86	80.952	ENSCJAG00000020540	PRDM12	90	80.952	Callithrix_jacchus
ENSMAMG00000018988	-	75	82.935	ENSCAFG00000023076	PRDM12	85	86.182	Canis_familiaris
ENSMAMG00000018988	-	86	81.250	ENSCAFG00020024046	PRDM12	89	81.250	Canis_lupus_dingo
ENSMAMG00000018988	-	86	81.250	ENSCHIG00000025005	PRDM12	90	81.250	Capra_hircus
ENSMAMG00000018988	-	83	80.247	ENSCPOG00000005901	PRDM12	95	79.938	Cavia_porcellus
ENSMAMG00000018988	-	86	80.952	ENSCCAG00000037485	PRDM12	89	80.952	Cebus_capucinus
ENSMAMG00000018988	-	86	80.952	ENSCATG00000020327	PRDM12	89	80.952	Cercocebus_atys
ENSMAMG00000018988	-	86	80.655	ENSCLAG00000005499	PRDM12	89	80.357	Chinchilla_lanigera
ENSMAMG00000018988	-	86	80.952	ENSCSAG00000014756	PRDM12	89	80.952	Chlorocebus_sabaeus
ENSMAMG00000018988	-	100	76.546	ENSCPBG00000022628	PRDM12	99	76.804	Chrysemys_picta_bellii
ENSMAMG00000018988	-	86	81.548	ENSCGRG00001015005	Prdm12	89	81.250	Cricetulus_griseus_chok1gshd
ENSMAMG00000018988	-	100	79.064	ENSCVAG00000000944	-	100	79.064	Cyprinodon_variegatus
ENSMAMG00000018988	-	100	73.618	ENSCVAG00000017166	prdm12b	100	74.436	Cyprinodon_variegatus
ENSMAMG00000018988	-	100	80.407	ENSDARG00000007430	prdm12b	100	78.372	Danio_rerio
ENSMAMG00000018988	-	86	80.712	ENSDNOG00000042302	PRDM12	90	80.712	Dasypus_novemcinctus
ENSMAMG00000018988	-	87	60.326	ENSEBUG00000016780	prdm12b	79	61.685	Eptatretus_burgeri
ENSMAMG00000018988	-	86	81.250	ENSEASG00005008472	PRDM12	90	81.250	Equus_asinus_asinus
ENSMAMG00000018988	-	86	81.250	ENSECAG00000005933	PRDM12	90	81.250	Equus_caballus
ENSMAMG00000018988	-	100	78.283	ENSELUG00000009905	prdm12b	100	75.253	Esox_lucius
ENSMAMG00000018988	-	100	75.457	ENSELUG00000013674	PRDM12	99	75.196	Esox_lucius
ENSMAMG00000018988	-	86	81.250	ENSFCAG00000043086	PRDM12	89	81.250	Felis_catus
ENSMAMG00000018988	-	100	77.062	ENSFALG00000001445	PRDM12	89	76.289	Ficedula_albicollis
ENSMAMG00000018988	-	100	73.869	ENSFHEG00000003944	prdm12b	100	73.881	Fundulus_heteroclitus
ENSMAMG00000018988	-	100	87.786	ENSFHEG00000007746	-	100	84.949	Fundulus_heteroclitus
ENSMAMG00000018988	-	86	82.196	ENSGMOG00000011797	prdm12b	95	80.172	Gadus_morhua
ENSMAMG00000018988	-	100	77.062	ENSGALG00000003895	PRDM12	99	76.289	Gallus_gallus
ENSMAMG00000018988	-	100	74.430	ENSGAFG00000010827	prdm12b	99	75.190	Gambusia_affinis
ENSMAMG00000018988	-	100	74.750	ENSGACG00000016713	prdm12b	99	73.750	Gasterosteus_aculeatus
ENSMAMG00000018988	-	100	76.804	ENSGAGG00000014083	PRDM12	99	76.804	Gopherus_agassizii
ENSMAMG00000018988	-	86	80.655	ENSGGOG00000010568	PRDM12	89	80.655	Gorilla_gorilla
ENSMAMG00000018988	-	100	89.394	ENSHBUG00000022537	-	93	87.879	Haplochromis_burtoni
ENSMAMG00000018988	-	100	75.188	ENSHBUG00000022878	prdm12b	100	74.436	Haplochromis_burtoni
ENSMAMG00000018988	-	86	80.952	ENSHGLG00000013939	PRDM12	89	80.952	Heterocephalus_glaber_female
ENSMAMG00000018988	-	100	75.844	ENSHCOG00000021167	-	100	72.727	Hippocampus_comes
ENSMAMG00000018988	-	86	76.487	ENSHCOG00000003663	prdm12b	100	69.287	Hippocampus_comes
ENSMAMG00000018988	-	100	72.449	ENSIPUG00000019544	PRDM12	100	71.000	Ictalurus_punctatus
ENSMAMG00000018988	-	100	78.426	ENSIPUG00000017053	prdm12b	100	76.396	Ictalurus_punctatus
ENSMAMG00000018988	-	86	81.548	ENSSTOG00000005986	PRDM12	85	81.250	Ictidomys_tridecemlineatus
ENSMAMG00000018988	-	86	81.548	ENSJJAG00000005424	Prdm12	98	81.250	Jaculus_jaculus
ENSMAMG00000018988	-	95	85.205	ENSKMAG00000021205	-	96	83.957	Kryptolebias_marmoratus
ENSMAMG00000018988	-	100	71.770	ENSKMAG00000016921	prdm12b	100	70.813	Kryptolebias_marmoratus
ENSMAMG00000018988	-	100	75.561	ENSLBEG00000017769	prdm12b	100	75.312	Labrus_bergylta
ENSMAMG00000018988	-	100	86.029	ENSLBEG00000007776	-	100	85.539	Labrus_bergylta
ENSMAMG00000018988	-	100	77.062	ENSLACG00000017560	PRDM12	99	75.703	Latimeria_chalumnae
ENSMAMG00000018988	-	100	78.974	ENSLOCG00000005429	prdm12b	99	77.436	Lepisosteus_oculatus
ENSMAMG00000018988	-	86	80.117	ENSLAFG00000006979	PRDM12	88	79.825	Loxodonta_africana
ENSMAMG00000018988	-	86	80.952	ENSMFAG00000040322	PRDM12	88	80.952	Macaca_fascicularis
ENSMAMG00000018988	-	86	80.952	ENSMNEG00000037234	PRDM12	89	80.952	Macaca_nemestrina
ENSMAMG00000018988	-	100	88.191	ENSMZEG00005000415	PRDM12	100	87.437	Maylandia_zebra
ENSMAMG00000018988	-	98	76.702	ENSMGAG00000005438	PRDM12	98	75.916	Meleagris_gallopavo
ENSMAMG00000018988	-	100	73.333	ENSMAUG00000013040	Prdm12	89	81.250	Mesocricetus_auratus
ENSMAMG00000018988	-	86	81.250	ENSMICG00000015480	PRDM12	90	81.250	Microcebus_murinus
ENSMAMG00000018988	-	86	81.845	ENSMOCG00000021026	Prdm12	89	81.548	Microtus_ochrogaster
ENSMAMG00000018988	-	100	75.835	ENSMODG00000012108	PRDM12	99	74.550	Monodelphis_domestica
ENSMAMG00000018988	-	83	73.731	ENSMALG00000021901	prdm12b	98	73.134	Monopterus_albus
ENSMAMG00000018988	-	86	81.548	MGP_CAROLIEiJ_G0023414	Prdm12	89	81.250	Mus_caroli
ENSMAMG00000018988	-	86	81.548	ENSMUSG00000079466	Prdm12	89	81.250	Mus_musculus
ENSMAMG00000018988	-	86	81.548	MGP_PahariEiJ_G0024871	Prdm12	89	81.250	Mus_pahari
ENSMAMG00000018988	-	86	81.548	MGP_SPRETEiJ_G0024331	Prdm12	89	81.250	Mus_spretus
ENSMAMG00000018988	-	86	81.548	ENSNGAG00000018480	Prdm12	92	81.250	Nannospalax_galili
ENSMAMG00000018988	-	100	74.627	ENSNBRG00000006727	prdm12b	100	74.129	Neolamprologus_brichardi
ENSMAMG00000018988	-	100	80.720	ENSNBRG00000024312	-	100	79.177	Neolamprologus_brichardi
ENSMAMG00000018988	-	100	68.638	ENSMEUG00000003828	PRDM12	99	67.352	Notamacropus_eugenii
ENSMAMG00000018988	-	86	80.655	ENSOPRG00000008680	PRDM12	98	80.655	Ochotona_princeps
ENSMAMG00000018988	-	86	81.250	ENSODEG00000016282	PRDM12	61	80.952	Octodon_degus
ENSMAMG00000018988	-	61	75.833	ENSOANG00000001043	PRDM12	100	74.583	Ornithorhynchus_anatinus
ENSMAMG00000018988	-	80	80.968	ENSOCUG00000008241	PRDM12	96	80.968	Oryctolagus_cuniculus
ENSMAMG00000018988	-	100	84.539	ENSORLG00000017558	-	100	82.793	Oryzias_latipes
ENSMAMG00000018988	-	100	73.827	ENSORLG00000007114	prdm12b	99	73.333	Oryzias_latipes
ENSMAMG00000018988	-	100	74.321	ENSORLG00020019565	prdm12b	99	73.827	Oryzias_latipes_hni
ENSMAMG00000018988	-	100	84.577	ENSORLG00020013167	-	100	82.587	Oryzias_latipes_hni
ENSMAMG00000018988	-	100	72.772	ENSORLG00015007621	prdm12b	99	73.515	Oryzias_latipes_hsok
ENSMAMG00000018988	-	100	84.289	ENSORLG00015003435	-	100	82.544	Oryzias_latipes_hsok
ENSMAMG00000018988	-	100	73.219	ENSOMEG00000004134	prdm12b	99	72.482	Oryzias_melastigma
ENSMAMG00000018988	-	100	85.572	ENSOMEG00000007762	-	100	83.582	Oryzias_melastigma
ENSMAMG00000018988	-	86	81.250	ENSOGAG00000007557	PRDM12	97	81.250	Otolemur_garnettii
ENSMAMG00000018988	-	76	78.188	ENSPPAG00000031506	-	97	78.188	Pan_paniscus
ENSMAMG00000018988	-	100	67.430	ENSPPRG00000023024	PRDM12	83	75.074	Panthera_pardus
ENSMAMG00000018988	-	86	80.952	ENSPTRG00000021475	PRDM12	89	80.952	Pan_troglodytes
ENSMAMG00000018988	-	86	80.952	ENSPTRG00000043324	-	89	80.952	Pan_troglodytes
ENSMAMG00000018988	-	86	80.952	ENSPANG00000025967	PRDM12	89	80.952	Papio_anubis
ENSMAMG00000018988	-	100	77.444	ENSPKIG00000007228	prdm12b	100	76.441	Paramormyrops_kingsleyae
ENSMAMG00000018988	-	86	77.647	ENSPKIG00000004305	PRDM12	94	77.059	Paramormyrops_kingsleyae
ENSMAMG00000018988	-	100	76.546	ENSPSIG00000006739	PRDM12	99	76.031	Pelodiscus_sinensis
ENSMAMG00000018988	-	100	74.300	ENSPMGG00000008867	prdm12b	99	72.637	Periophthalmus_magnuspinnatus
ENSMAMG00000018988	-	100	83.715	ENSPMGG00000002356	-	100	82.171	Periophthalmus_magnuspinnatus
ENSMAMG00000018988	-	88	80.233	ENSPEMG00000009969	Prdm12	89	81.250	Peromyscus_maniculatus_bairdii
ENSMAMG00000018988	-	100	76.093	ENSPCIG00000024119	PRDM12	99	74.807	Phascolarctos_cinereus
ENSMAMG00000018988	-	100	74.250	ENSPFOG00000019841	prdm12b	100	73.815	Poecilia_formosa
ENSMAMG00000018988	-	100	74.177	ENSPLAG00000016626	prdm12b	99	74.430	Poecilia_latipinna
ENSMAMG00000018988	-	97	74.346	ENSPMEG00000016698	prdm12b	99	74.869	Poecilia_mexicana
ENSMAMG00000018988	-	100	75.190	ENSPREG00000015073	prdm12b	99	74.684	Poecilia_reticulata
ENSMAMG00000018988	-	97	80.811	ENSPREG00000003211	-	96	78.649	Poecilia_reticulata
ENSMAMG00000018988	-	86	80.952	ENSPPYG00000019694	PRDM12	92	80.952	Pongo_abelii
ENSMAMG00000018988	-	86	81.250	ENSPCOG00000022255	PRDM12	89	81.250	Propithecus_coquereli
ENSMAMG00000018988	-	86	81.250	ENSPVAG00000001511	PRDM12	89	81.250	Pteropus_vampyrus
ENSMAMG00000018988	-	100	87.940	ENSPNYG00000013589	-	100	87.186	Pundamilia_nyererei
ENSMAMG00000018988	-	100	74.813	ENSPNYG00000009607	prdm12b	100	74.314	Pundamilia_nyererei
ENSMAMG00000018988	-	100	75.131	ENSPNAG00000013396	PRDM12	100	75.907	Pygocentrus_nattereri
ENSMAMG00000018988	-	100	77.157	ENSPNAG00000024532	prdm12b	100	77.665	Pygocentrus_nattereri
ENSMAMG00000018988	-	86	81.548	ENSRNOG00000009218	Prdm12	89	81.250	Rattus_norvegicus
ENSMAMG00000018988	-	84	80.488	ENSRBIG00000042712	PRDM12	88	79.819	Rhinopithecus_bieti
ENSMAMG00000018988	-	85	80.723	ENSRROG00000043554	PRDM12	99	80.723	Rhinopithecus_roxellana
ENSMAMG00000018988	-	100	75.641	ENSSHAG00000015972	PRDM12	99	74.359	Sarcophilus_harrisii
ENSMAMG00000018988	-	100	70.976	ENSSMAG00000003754	prdm12b	100	70.743	Scophthalmus_maximus
ENSMAMG00000018988	-	100	84.158	ENSSDUG00000019071	-	100	83.911	Seriola_dumerili
ENSMAMG00000018988	-	100	74.510	ENSSDUG00000023498	prdm12b	100	73.105	Seriola_dumerili
ENSMAMG00000018988	-	100	83.805	ENSSLDG00000013562	-	100	83.548	Seriola_lalandi_dorsalis
ENSMAMG00000018988	-	100	74.510	ENSSLDG00000009557	prdm12b	100	72.861	Seriola_lalandi_dorsalis
ENSMAMG00000018988	-	100	76.607	ENSSPUG00000013424	PRDM12	99	74.112	Sphenodon_punctatus
ENSMAMG00000018988	-	100	78.295	ENSSPAG00000022420	-	100	77.487	Stegastes_partitus
ENSMAMG00000018988	-	100	74.627	ENSSPAG00000018824	prdm12b	100	74.129	Stegastes_partitus
ENSMAMG00000018988	-	86	81.250	ENSSSCG00000005703	PRDM12	89	81.250	Sus_scrofa
ENSMAMG00000018988	-	100	79.442	ENSTRUG00000013239	-	100	78.173	Takifugu_rubripes
ENSMAMG00000018988	-	100	74.937	ENSTRUG00000018659	prdm12b	100	74.430	Takifugu_rubripes
ENSMAMG00000018988	-	100	74.937	ENSTNIG00000009020	prdm12b	99	73.485	Tetraodon_nigroviridis
ENSMAMG00000018988	-	100	79.896	ENSTNIG00000005859	-	99	79.373	Tetraodon_nigroviridis
ENSMAMG00000018988	-	86	81.250	ENSUAMG00000009653	PRDM12	90	81.250	Ursus_americanus
ENSMAMG00000018988	-	86	81.250	ENSVVUG00000027662	PRDM12	77	81.250	Vulpes_vulpes
ENSMAMG00000018988	-	100	74.937	ENSXCOG00000002836	prdm12b	99	74.937	Xiphophorus_couchianus
ENSMAMG00000018988	-	100	86.198	ENSXMAG00000028012	-	100	84.115	Xiphophorus_maculatus
ENSMAMG00000018988	-	100	74.372	ENSXMAG00000005537	prdm12b	100	74.372	Xiphophorus_maculatus