EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000019098 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-113e8.11
Alias: -
Full Name: si:ch211-113e8.11
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 16431 bases
Position: chrOOHQ01000044.1:10236468-10252898
Accession: ZDB-GENE-090313-12
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000028377	zf-CCCH	PF00642.24	4.1e-05	1	1
ENSMAMP00000028373	zf-CCCH	PF00642.24	4.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000029115	-	2460	-	ENSMAMP00000028377	249 (aa)	-	-
ENSMAMT00000029111	-	1739	-	ENSMAMP00000028373	302 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000019098's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000019098's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000019098	si:ch211-113e8.11	90	69.697	ENSAPOG00000010990	si:ch211-113e8.11	92	64.372	Acanthochromis_polyacanthus
ENSMAMG00000019098	si:ch211-113e8.11	59	70.748	ENSACIG00000011566	si:ch211-113e8.11	92	62.559	Amphilophus_citrinellus
ENSMAMG00000019098	si:ch211-113e8.11	95	62.963	ENSAOCG00000022156	si:ch211-113e8.11	92	64.490	Amphiprion_ocellaris
ENSMAMG00000019098	si:ch211-113e8.11	95	62.963	ENSAPEG00000018284	si:ch211-113e8.11	92	64.490	Amphiprion_percula
ENSMAMG00000019098	si:ch211-113e8.11	90	71.366	ENSATEG00000018391	si:ch211-113e8.11	89	70.354	Anabas_testudineus
ENSMAMG00000019098	si:ch211-113e8.11	90	60.444	ENSACLG00000017011	si:ch211-113e8.11	89	61.088	Astatotilapia_calliptera
ENSMAMG00000019098	si:ch211-113e8.11	89	51.965	ENSAMXG00000000733	si:ch211-113e8.11	95	50.775	Astyanax_mexicanus
ENSMAMG00000019098	si:ch211-113e8.11	92	62.979	ENSCSEG00000004538	si:ch211-113e8.11	93	61.570	Cynoglossus_semilaevis
ENSMAMG00000019098	si:ch211-113e8.11	94	57.265	ENSCVAG00000020156	si:ch211-113e8.11	94	54.918	Cyprinodon_variegatus
ENSMAMG00000019098	si:ch211-113e8.11	53	56.061	ENSDARG00000076585	si:ch211-113e8.11	70	52.023	Danio_rerio
ENSMAMG00000019098	si:ch211-113e8.11	59	30.061	FBgn0259728	CG42382	75	30.061	Drosophila_melanogaster
ENSMAMG00000019098	si:ch211-113e8.11	92	53.252	ENSELUG00000001130	si:ch211-113e8.11	98	50.579	Esox_lucius
ENSMAMG00000019098	si:ch211-113e8.11	88	56.889	ENSFHEG00000007870	si:ch211-113e8.11	97	52.941	Fundulus_heteroclitus
ENSMAMG00000019098	si:ch211-113e8.11	90	61.233	ENSGAFG00000020570	si:ch211-113e8.11	98	58.566	Gambusia_affinis
ENSMAMG00000019098	si:ch211-113e8.11	96	60.084	ENSHBUG00000003552	si:ch211-113e8.11	86	62.832	Haplochromis_burtoni
ENSMAMG00000019098	si:ch211-113e8.11	90	56.579	ENSHCOG00000002041	si:ch211-113e8.11	85	54.978	Hippocampus_comes
ENSMAMG00000019098	si:ch211-113e8.11	62	51.807	ENSIPUG00000002260	si:ch211-113e8.11	92	45.749	Ictalurus_punctatus
ENSMAMG00000019098	si:ch211-113e8.11	91	60.870	ENSKMAG00000000086	si:ch211-113e8.11	88	56.904	Kryptolebias_marmoratus
ENSMAMG00000019098	si:ch211-113e8.11	92	63.445	ENSLBEG00000008353	si:ch211-113e8.11	89	63.445	Labrus_bergylta
ENSMAMG00000019098	si:ch211-113e8.11	64	39.752	ENSLACG00000004304	si:ch211-113e8.11	87	40.541	Latimeria_chalumnae
ENSMAMG00000019098	si:ch211-113e8.11	88	61.364	ENSMZEG00005023658	si:ch211-113e8.11	87	64.253	Maylandia_zebra
ENSMAMG00000019098	si:ch211-113e8.11	74	66.667	ENSMMOG00000007254	si:ch211-113e8.11	84	66.667	Mola_mola
ENSMAMG00000019098	si:ch211-113e8.11	95	74.059	ENSMALG00000005110	si:ch211-113e8.11	97	72.803	Monopterus_albus
ENSMAMG00000019098	si:ch211-113e8.11	90	60.889	ENSNBRG00000015060	si:ch211-113e8.11	86	63.717	Neolamprologus_brichardi
ENSMAMG00000019098	si:ch211-113e8.11	96	56.967	ENSORLG00000023699	si:ch211-113e8.11	92	56.557	Oryzias_latipes
ENSMAMG00000019098	si:ch211-113e8.11	93	58.723	ENSORLG00020022094	si:ch211-113e8.11	89	58.298	Oryzias_latipes_hni
ENSMAMG00000019098	si:ch211-113e8.11	80	62.376	ENSORLG00015002588	si:ch211-113e8.11	72	62.963	Oryzias_latipes_hsok
ENSMAMG00000019098	si:ch211-113e8.11	92	58.333	ENSOMEG00000010624	si:ch211-113e8.11	97	54.800	Oryzias_melastigma
ENSMAMG00000019098	si:ch211-113e8.11	56	53.103	ENSPKIG00000023576	si:ch211-113e8.11	69	48.619	Paramormyrops_kingsleyae
ENSMAMG00000019098	si:ch211-113e8.11	84	55.660	ENSPMGG00000018547	si:ch211-113e8.11	95	52.521	Periophthalmus_magnuspinnatus
ENSMAMG00000019098	si:ch211-113e8.11	88	63.348	ENSPFOG00000007950	si:ch211-113e8.11	98	59.836	Poecilia_formosa
ENSMAMG00000019098	si:ch211-113e8.11	90	62.996	ENSPLAG00000002081	si:ch211-113e8.11	98	59.363	Poecilia_latipinna
ENSMAMG00000019098	si:ch211-113e8.11	90	63.436	ENSPMEG00000017505	si:ch211-113e8.11	98	58.964	Poecilia_mexicana
ENSMAMG00000019098	si:ch211-113e8.11	90	61.674	ENSPREG00000008530	si:ch211-113e8.11	98	57.200	Poecilia_reticulata
ENSMAMG00000019098	si:ch211-113e8.11	90	60.889	ENSPNYG00000022856	si:ch211-113e8.11	86	63.717	Pundamilia_nyererei
ENSMAMG00000019098	si:ch211-113e8.11	72	44.000	ENSPNAG00000013782	si:ch211-113e8.11	76	49.735	Pygocentrus_nattereri
ENSMAMG00000019098	si:ch211-113e8.11	86	50.224	ENSSFOG00015000959	si:ch211-113e8.11	94	46.825	Scleropages_formosus
ENSMAMG00000019098	si:ch211-113e8.11	70	77.143	ENSSMAG00000009732	si:ch211-113e8.11	87	69.683	Scophthalmus_maximus
ENSMAMG00000019098	si:ch211-113e8.11	93	76.293	ENSSDUG00000000112	si:ch211-113e8.11	90	75.431	Seriola_dumerili
ENSMAMG00000019098	si:ch211-113e8.11	93	75.000	ENSSLDG00000003287	si:ch211-113e8.11	90	75.107	Seriola_lalandi_dorsalis
ENSMAMG00000019098	si:ch211-113e8.11	94	66.949	ENSSPAG00000001375	si:ch211-113e8.11	93	65.306	Stegastes_partitus
ENSMAMG00000019098	si:ch211-113e8.11	87	58.447	ENSTRUG00000023898	si:ch211-113e8.11	66	63.314	Takifugu_rubripes
ENSMAMG00000019098	si:ch211-113e8.11	90	61.135	ENSXMAG00000024104	si:ch211-113e8.11	98	53.383	Xiphophorus_maculatus