EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMAMG00000019143 (Gene tree)
Gene ID
113128772
Gene Symbol
rbm47
Alias
si:ch211-241e15.2|wu:fj94a03
Full Name
RNA binding motif protein 47
Gene Type
protein_coding
Species
Mastacembelus_armatus
Status
putative
Strand
Minus strand
Length
30363 bases
Position
chrOOHQ01000044.1:10259257-10289619
Accession
113128772
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMAMP00000028483RRM_5PF13893.65.4e-0611
ENSMAMP00000028483RRM_1PF00076.222e-3913
ENSMAMP00000028483RRM_1PF00076.222e-3923
ENSMAMP00000028483RRM_1PF00076.222e-3933
ENSMAMP00000028478RRM_1PF00076.222.1e-3913
ENSMAMP00000028478RRM_1PF00076.222.1e-3923
ENSMAMP00000028478RRM_1PF00076.222.1e-3933
ENSMAMP00000028458RRM_1PF00076.223.2e-3913
ENSMAMP00000028458RRM_1PF00076.223.2e-3923
ENSMAMP00000028458RRM_1PF00076.223.2e-3933
ENSMAMP00000028453RRM_1PF00076.223.5e-3913
ENSMAMP00000028453RRM_1PF00076.223.5e-3923
ENSMAMP00000028453RRM_1PF00076.223.5e-3933
ENSMAMP00000028468RRM_1PF00076.223.5e-3913
ENSMAMP00000028468RRM_1PF00076.223.5e-3923
ENSMAMP00000028468RRM_1PF00076.223.5e-3933
ENSMAMP00000028489RRM_1PF00076.223.5e-3913
ENSMAMP00000028489RRM_1PF00076.223.5e-3923
ENSMAMP00000028489RRM_1PF00076.223.5e-3933
ENSMAMP00000028496RRM_1PF00076.223.5e-3913
ENSMAMP00000028496RRM_1PF00076.223.5e-3923
ENSMAMP00000028496RRM_1PF00076.223.5e-3933
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMAMT00000029219-5241XM_026304330ENSMAMP00000028478541 (aa)XP_026160115UPI000E45B798
ENSMAMT00000029209-5280XM_026304321ENSMAMP00000028468611 (aa)XP_026160106UPI000E46296F
ENSMAMT00000029199-5427XM_026304327ENSMAMP00000028458603 (aa)XP_026160112UPI000E458008
ENSMAMT00000029192-5451XM_026304316ENSMAMP00000028453611 (aa)XP_026160101UPI000E46296F
ENSMAMT00000029237-1902-ENSMAMP00000028496611 (aa)-UPI000E46296F
ENSMAMT00000029224-5217XM_026304331ENSMAMP00000028483533 (aa)XP_026160116UPI000E454776
ENSMAMT00000029230-5383XM_026304317ENSMAMP00000028489611 (aa)XP_026160102UPI000E46296F
Gene Model
Click here to download ENSMAMG00000019143's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000019143's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMAMG00000019143rbm475651.987ENSMAMG00000004406-5051.780
ENSMAMG00000019143rbm475853.503ENSMAMG00000001632hnrnpr5152.484
ENSMAMG00000019143rbm475770.957ENSMAMG00000010402a1cf8952.788
ENSMAMG00000019143rbm475469.338ENSMAMG00000009093rbm465870.383
ENSMAMG00000019143rbm475653.311ENSMAMG00000007903syncripl7446.552
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMAMG00000019143rbm479585.028ENSG00000163694RBM4710083.043Homo_sapiens
ENSMAMG00000019143rbm4710096.658ENSAPOG00000011062rbm4710096.658Acanthochromis_polyacanthus
ENSMAMG00000019143rbm479481.067ENSAMEG00000009672RBM4710075.407Ailuropoda_melanoleuca
ENSMAMG00000019143rbm4710092.066ENSACIG00000011531rbm4710092.066Amphilophus_citrinellus
ENSMAMG00000019143rbm4710096.658ENSAOCG00000022245rbm4710096.658Amphiprion_ocellaris
ENSMAMG00000019143rbm4710096.658ENSAPEG00000018304rbm4710096.658Amphiprion_percula
ENSMAMG00000019143rbm4710096.401ENSATEG00000018400rbm4710094.959Anabas_testudineus
ENSMAMG00000019143rbm4710075.450ENSAPLG00000013974RBM4710075.286Anas_platyrhynchos
ENSMAMG00000019143rbm4710079.897ENSACAG00000011833RBM4710075.530Anolis_carolinensis
ENSMAMG00000019143rbm4710081.443ENSANAG00000029440RBM4710082.732Aotus_nancymaae
ENSMAMG00000019143rbm4710095.596ENSACLG00000016902rbm4710095.596Astatotilapia_calliptera
ENSMAMG00000019143rbm4710081.331ENSAMXG00000021794rbm4710082.843Astyanax_mexicanus
ENSMAMG00000019143rbm4710077.995ENSBTAG00000002356RBM4710077.011Bos_taurus
ENSMAMG00000019143rbm479585.915ENSCJAG00000019385RBM4710082.732Callithrix_jacchus
ENSMAMG00000019143rbm479384.986ENSCAFG00000015898RBM4710075.862Canis_familiaris
ENSMAMG00000019143rbm477884.986ENSCAFG00020010558RBM479480.928Canis_lupus_dingo
ENSMAMG00000019143rbm4710077.995ENSCHIG00000026214RBM4710077.011Capra_hircus
ENSMAMG00000019143rbm478486.996ENSTSYG00000033612RBM479385.841Carlito_syrichta
ENSMAMG00000019143rbm4710073.522ENSCAPG00000008426RBM4710070.888Cavia_aperea
ENSMAMG00000019143rbm4710081.186ENSCPOG00000014100RBM4710076.623Cavia_porcellus
ENSMAMG00000019143rbm4710082.474ENSCCAG00000030129-10082.474Cebus_capucinus
ENSMAMG00000019143rbm479955.025ENSCCAG00000024397-9955.189Cebus_capucinus
ENSMAMG00000019143rbm479585.028ENSCATG00000042064RBM4710083.033Cercocebus_atys
ENSMAMG00000019143rbm479585.915ENSCLAG00000001684RBM4710079.532Chinchilla_lanigera
ENSMAMG00000019143rbm479481.551ENSCSAG00000017060RBM4710076.672Chlorocebus_sabaeus
ENSMAMG00000019143rbm477387.908ENSCHOG00000011731RBM478875.877Choloepus_hoffmanni
ENSMAMG00000019143rbm479983.548ENSCPBG00000013831RBM4710078.105Chrysemys_picta_bellii
ENSMAMG00000019143rbm479586.236ENSCANG00000019997RBM4710083.033Colobus_angolensis_palliatus
ENSMAMG00000019143rbm4710070.741ENSCGRG00001020102-10077.436Cricetulus_griseus_chok1gshd
ENSMAMG00000019143rbm4710080.977ENSCGRG00001000623-10082.262Cricetulus_griseus_chok1gshd
ENSMAMG00000019143rbm4710079.040ENSCGRG00000007762-10077.778Cricetulus_griseus_crigri
ENSMAMG00000019143rbm479473.373ENSCGRG00000014760-9682.254Cricetulus_griseus_crigri
ENSMAMG00000019143rbm479294.915ENSCSEG00000004545rbm4710089.604Cynoglossus_semilaevis
ENSMAMG00000019143rbm4710094.602ENSCVAG00000020144rbm4710094.602Cyprinodon_variegatus
ENSMAMG00000019143rbm4710086.598ENSDARG00000061985rbm4710083.361Danio_rerio
ENSMAMG00000019143rbm479486.517ENSDNOG00000046854RBM4710077.723Dasypus_novemcinctus
ENSMAMG00000019143rbm4710077.670ENSDORG00000010144Rbm4710076.098Dipodomys_ordii
ENSMAMG00000019143rbm4710076.156ENSETEG00000009194RBM4710076.509Echinops_telfairi
ENSMAMG00000019143rbm479558.784ENSEBUG00000011912rbm478672.253Eptatretus_burgeri
ENSMAMG00000019143rbm479482.181ENSEASG00005008443RBM4710076.847Equus_asinus_asinus
ENSMAMG00000019143rbm479482.181ENSECAG00000004400RBM4710076.847Equus_caballus
ENSMAMG00000019143rbm477089.524ENSEEUG00000001194RBM477582.305Erinaceus_europaeus
ENSMAMG00000019143rbm4710088.832ENSELUG00000006148rbm4710088.832Esox_lucius
ENSMAMG00000019143rbm479481.067ENSFCAG00000012399RBM4710077.100Felis_catus
ENSMAMG00000019143rbm479983.163ENSFALG00000002861RBM4710078.013Ficedula_albicollis
ENSMAMG00000019143rbm4710080.412ENSFDAG00000016326RBM4710075.453Fukomys_damarensis
ENSMAMG00000019143rbm4710092.545ENSFHEG00000007938rbm4710090.228Fundulus_heteroclitus
ENSMAMG00000019143rbm4710087.817ENSGMOG00000014802rbm4710087.817Gadus_morhua
ENSMAMG00000019143rbm477283.632ENSGALG00000014267RBM4710083.632Gallus_gallus
ENSMAMG00000019143rbm477289.664ENSGAFG00000020571rbm479889.664Gambusia_affinis
ENSMAMG00000019143rbm479992.545ENSGACG00000016223rbm4710092.545Gasterosteus_aculeatus
ENSMAMG00000019143rbm479983.548ENSGAGG00000020051RBM4710078.105Gopherus_agassizii
ENSMAMG00000019143rbm479585.028ENSGGOG00000001367RBM4710083.033Gorilla_gorilla
ENSMAMG00000019143rbm4710095.596ENSHBUG00000003520rbm4710095.596Haplochromis_burtoni
ENSMAMG00000019143rbm4710060.781ENSHGLG00000016914RBM4710078.363Heterocephalus_glaber_female
ENSMAMG00000019143rbm4710081.959ENSHGLG00100014028-10078.363Heterocephalus_glaber_male
ENSMAMG00000019143rbm4710068.421ENSHGLG00100003071-10068.092Heterocephalus_glaber_male
ENSMAMG00000019143rbm479993.271ENSHCOG00000002074rbm479994.859Hippocampus_comes
ENSMAMG00000019143rbm479986.154ENSIPUG00000004743rbm4710083.251Ictalurus_punctatus
ENSMAMG00000019143rbm479583.754ENSSTOG00000004727RBM4710082.474Ictidomys_tridecemlineatus
ENSMAMG00000019143rbm479482.667ENSJJAG00000013823Rbm4710075.654Jaculus_jaculus
ENSMAMG00000019143rbm4710093.333ENSKMAG00000000084rbm4710093.590Kryptolebias_marmoratus
ENSMAMG00000019143rbm4710093.830ENSLBEG00000008436rbm4710093.703Labrus_bergylta
ENSMAMG00000019143rbm479487.675ENSLACG00000007196RBM4710077.504Latimeria_chalumnae
ENSMAMG00000019143rbm479390.368ENSLOCG00000012966rbm479581.683Lepisosteus_oculatus
ENSMAMG00000019143rbm479980.412ENSLAFG00000011998RBM4710076.432Loxodonta_africana
ENSMAMG00000019143rbm479585.028ENSMFAG00000037967RBM4710083.033Macaca_fascicularis
ENSMAMG00000019143rbm479481.551ENSMMUG00000012036RBM4710081.068Macaca_mulatta
ENSMAMG00000019143rbm479584.746ENSMNEG00000040774RBM4710083.033Macaca_nemestrina
ENSMAMG00000019143rbm479487.755ENSMLEG00000041432RBM4710083.841Mandrillus_leucophaeus
ENSMAMG00000019143rbm4710095.596ENSMZEG00005023659rbm4710093.517Maylandia_zebra
ENSMAMG00000019143rbm479983.548ENSMGAG00000012226RBM4710077.687Meleagris_gallopavo
ENSMAMG00000019143rbm4710080.513ENSMAUG00000006493Rbm4710081.538Mesocricetus_auratus
ENSMAMG00000019143rbm479482.621ENSMICG00000026417RBM4710080.155Microcebus_murinus
ENSMAMG00000019143rbm4710080.977ENSMOCG00000021170Rbm4710082.262Microtus_ochrogaster
ENSMAMG00000019143rbm479994.301ENSMMOG00000007260rbm4710092.881Mola_mola
ENSMAMG00000019143rbm479983.505ENSMODG00000007003RBM4710077.377Monodelphis_domestica
ENSMAMG00000019143rbm475877.848ENSMODG00000015426-9877.848Monodelphis_domestica
ENSMAMG00000019143rbm4710076.471ENSMODG00000020561-10073.267Monodelphis_domestica
ENSMAMG00000019143rbm4710094.574ENSMALG00000005167rbm4710094.574Monopterus_albus
ENSMAMG00000019143rbm4710080.206MGP_CAROLIEiJ_G0027258Rbm4710081.491Mus_caroli
ENSMAMG00000019143rbm4710080.206ENSMUSG00000070780Rbm4710081.491Mus_musculus
ENSMAMG00000019143rbm4710080.463MGP_PahariEiJ_G0017040Rbm4710081.748Mus_pahari
ENSMAMG00000019143rbm4710080.206MGP_SPRETEiJ_G0028253Rbm4710081.491Mus_spretus
ENSMAMG00000019143rbm479481.867ENSMPUG00000006177RBM479475.614Mustela_putorius_furo
ENSMAMG00000019143rbm4710082.051ENSMLUG00000000889RBM4710076.519Myotis_lucifugus
ENSMAMG00000019143rbm4710079.462ENSNGAG00000003325Rbm4710075.856Nannospalax_galili
ENSMAMG00000019143rbm479996.114ENSNBRG00000015092rbm4710093.607Neolamprologus_brichardi
ENSMAMG00000019143rbm479585.028ENSNLEG00000017151RBM4710083.033Nomascus_leucogenys
ENSMAMG00000019143rbm476687.606ENSMEUG00000009516-9980.425Notamacropus_eugenii
ENSMAMG00000019143rbm478685.477ENSOPRG00000016507-7585.477Ochotona_princeps
ENSMAMG00000019143rbm479481.067ENSODEG00000004873RBM4710076.480Octodon_degus
ENSMAMG00000019143rbm479995.619ENSONIG00000009061rbm4710093.750Oreochromis_niloticus
ENSMAMG00000019143rbm4710082.732ENSOANG00000008978RBM4710077.686Ornithorhynchus_anatinus
ENSMAMG00000019143rbm4710080.155ENSOCUG00000012034RBM4710076.645Oryctolagus_cuniculus
ENSMAMG00000019143rbm4710093.282ENSORLG00000005847rbm4710093.282Oryzias_latipes
ENSMAMG00000019143rbm4710093.282ENSORLG00020005154rbm4710093.282Oryzias_latipes_hni
ENSMAMG00000019143rbm4710093.540ENSORLG00015000066rbm4710093.540Oryzias_latipes_hsok
ENSMAMG00000019143rbm4710093.523ENSOMEG00000010730rbm4710091.542Oryzias_melastigma
ENSMAMG00000019143rbm479481.867ENSOGAG00000029367-10075.777Otolemur_garnettii
ENSMAMG00000019143rbm479476.800ENSOGAG00000025193-10070.675Otolemur_garnettii
ENSMAMG00000019143rbm4710067.652ENSOARG00000012711RBM4710069.294Ovis_aries
ENSMAMG00000019143rbm479481.551ENSPPAG00000029763RBM479980.645Pan_paniscus
ENSMAMG00000019143rbm479584.401ENSPPRG00000012873RBM479981.701Panthera_pardus
ENSMAMG00000019143rbm478375.746ENSPTIG00000017046RBM4710076.143Panthera_tigris_altaica
ENSMAMG00000019143rbm479585.028ENSPTRG00000016006RBM4710083.033Pan_troglodytes
ENSMAMG00000019143rbm479585.028ENSPANG00000005980RBM4710083.033Papio_anubis
ENSMAMG00000019143rbm479588.301ENSPKIG00000005037rbm4710085.271Paramormyrops_kingsleyae
ENSMAMG00000019143rbm4710084.456ENSPKIG00000013431RBM479884.496Paramormyrops_kingsleyae
ENSMAMG00000019143rbm478978.413ENSPSIG00000017516RBM479778.413Pelodiscus_sinensis
ENSMAMG00000019143rbm479492.416ENSPMGG00000018540rbm4710088.889Periophthalmus_magnuspinnatus
ENSMAMG00000019143rbm4710080.720ENSPEMG00000011088Rbm4710082.005Peromyscus_maniculatus_bairdii
ENSMAMG00000019143rbm4710092.545ENSPFOG00000007997rbm4710089.052Poecilia_formosa
ENSMAMG00000019143rbm4710092.288ENSPLAG00000002072rbm4710089.378Poecilia_latipinna
ENSMAMG00000019143rbm4710092.443ENSPMEG00000017492rbm4710092.288Poecilia_mexicana
ENSMAMG00000019143rbm4710092.695ENSPREG00000008456rbm4710092.545Poecilia_reticulata
ENSMAMG00000019143rbm479471.883ENSPPYG00000014688RBM479868.718Pongo_abelii
ENSMAMG00000019143rbm478979.494ENSPCAG00000011879RBM478182.809Procavia_capensis
ENSMAMG00000019143rbm479484.986ENSPCOG00000023451RBM4710081.186Propithecus_coquereli
ENSMAMG00000019143rbm479480.637ENSPVAG00000003812RBM4710075.817Pteropus_vampyrus
ENSMAMG00000019143rbm479995.596ENSPNYG00000022868rbm4710092.974Pundamilia_nyererei
ENSMAMG00000019143rbm479988.235ENSPNAG00000007940rbm4710085.621Pygocentrus_nattereri
ENSMAMG00000019143rbm4710080.307ENSRNOG00000002408Rbm4710076.105Rattus_norvegicus
ENSMAMG00000019143rbm479586.236ENSRBIG00000039601RBM4710083.033Rhinopithecus_bieti
ENSMAMG00000019143rbm479586.236ENSRROG00000044696RBM4710083.033Rhinopithecus_roxellana
ENSMAMG00000019143rbm4710073.719ENSSBOG00000028475RBM479782.821Saimiri_boliviensis_boliviensis
ENSMAMG00000019143rbm4710080.147ENSSHAG00000017576RBM4710077.303Sarcophilus_harrisii
ENSMAMG00000019143rbm4710079.339ENSSFOG00015012445rbm4710085.242Scleropages_formosus
ENSMAMG00000019143rbm479883.289ENSSFOG00015024101RBM4710079.766Scleropages_formosus
ENSMAMG00000019143rbm4710093.830ENSSMAG00000009744rbm4710093.955Scophthalmus_maximus
ENSMAMG00000019143rbm4710095.420ENSSDUG00000022684rbm479996.246Seriola_dumerili
ENSMAMG00000019143rbm4710094.911ENSSLDG00000003109rbm4710094.911Seriola_lalandi_dorsalis
ENSMAMG00000019143rbm478577.706ENSSARG00000001735RBM478480.087Sorex_araneus
ENSMAMG00000019143rbm4710082.519ENSSPUG00000007515RBM4710082.519Sphenodon_punctatus
ENSMAMG00000019143rbm4710097.172ENSSPAG00000001257rbm4710097.172Stegastes_partitus
ENSMAMG00000019143rbm479585.393ENSSSCG00000008796RBM4710076.683Sus_scrofa
ENSMAMG00000019143rbm479982.776ENSTGUG00000008705RBM4710077.377Taeniopygia_guttata
ENSMAMG00000019143rbm4710088.889ENSTRUG00000014050rbm4710088.889Takifugu_rubripes
ENSMAMG00000019143rbm479993.264ENSTNIG00000006127rbm4710091.376Tetraodon_nigroviridis
ENSMAMG00000019143rbm478283.616ENSTBEG00000001607RBM477680.412Tupaia_belangeri
ENSMAMG00000019143rbm479482.181ENSTTRG00000002839RBM4710077.265Tursiops_truncatus
ENSMAMG00000019143rbm479481.067ENSUAMG00000021346RBM4710075.941Ursus_americanus
ENSMAMG00000019143rbm475285.714ENSVPAG00000000641-5675.949Vicugna_pacos
ENSMAMG00000019143rbm479385.552ENSVVUG00000014774RBM4710075.987Vulpes_vulpes
ENSMAMG00000019143rbm4710082.097ENSXETG00000012802rbm4710076.432Xenopus_tropicalis
ENSMAMG00000019143rbm4710087.500ENSXCOG00000000780rbm4710089.637Xiphophorus_couchianus
ENSMAMG00000019143rbm4710092.695ENSXMAG00000009874rbm4710092.695Xiphophorus_maculatus

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