EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000019230 (Gene tree)
Gene ID: 113140753
Gene Symbol: si:dkey-16l2.16
Alias: -
Full Name: ras-related protein Rab-35-like
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 4836 bases
Position: chrOOHQ01000092.1:7034572-7039407
Accession: 113140753
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000028573	MMR_HSR1	PF01926.23	4.4e-07	1	1
ENSMAMP00000028585	MMR_HSR1	PF01926.23	6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000029343	-	588	-	ENSMAMP00000028600	195 (aa)	-	-
ENSMAMT00000029327	-	1533	-	ENSMAMP00000028585	220 (aa)	-	-
ENSMAMT00000029314	-	1500	-	ENSMAMP00000028573	209 (aa)	XP_026180522	UPI000E461AAE

Gene Model

Click here to download ENSMAMG00000019230's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000019230's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000019230	si:dkey-16l2.16	85	35.602	ENSMAMG00000021095	si:dkey-13a21.4	93	35.602
ENSMAMG00000019230	si:dkey-16l2.16	77	40.000	ENSMAMG00000012233	rab6bb	79	40.000
ENSMAMG00000019230	si:dkey-16l2.16	82	44.000	ENSMAMG00000014320	rab18a	85	45.506
ENSMAMG00000019230	si:dkey-16l2.16	86	30.601	ENSMAMG00000001194	-	88	30.601
ENSMAMG00000019230	si:dkey-16l2.16	95	33.005	ENSMAMG00000020214	rab34b	80	33.005
ENSMAMG00000019230	si:dkey-16l2.16	69	49.324	ENSMAMG00000001098	rab33ba	61	49.324
ENSMAMG00000019230	si:dkey-16l2.16	80	39.205	ENSMAMG00000010136	rab36	65	39.205
ENSMAMG00000019230	si:dkey-16l2.16	96	34.826	ENSMAMG00000016207	-	89	34.826
ENSMAMG00000019230	si:dkey-16l2.16	98	40.191	ENSMAMG00000018556	rab11ba	96	40.191
ENSMAMG00000019230	si:dkey-16l2.16	77	40.244	ENSMAMG00000012488	rab6a	79	40.244
ENSMAMG00000019230	si:dkey-16l2.16	74	34.161	ENSMAMG00000022707	dnajc27	59	34.161
ENSMAMG00000019230	si:dkey-16l2.16	78	38.095	ENSMAMG00000013538	rab9a	83	38.095
ENSMAMG00000019230	si:dkey-16l2.16	83	48.276	ENSMAMG00000006886	RAB15	82	48.276
ENSMAMG00000019230	si:dkey-16l2.16	78	39.024	ENSMAMG00000006024	rab22a	85	39.024
ENSMAMG00000019230	si:dkey-16l2.16	86	40.331	ENSMAMG00000012573	rab5aa	83	40.331
ENSMAMG00000019230	si:dkey-16l2.16	78	44.512	ENSMAMG00000018450	-	76	44.512
ENSMAMG00000019230	si:dkey-16l2.16	83	32.961	ENSMAMG00000001748	rhebl1	93	32.961
ENSMAMG00000019230	si:dkey-16l2.16	77	34.161	ENSMAMG00000015456	rab23	78	34.375
ENSMAMG00000019230	si:dkey-16l2.16	98	39.904	ENSMAMG00000010278	rab11al	96	39.904
ENSMAMG00000019230	si:dkey-16l2.16	87	47.802	ENSMAMG00000014602	rab13	91	47.802
ENSMAMG00000019230	si:dkey-16l2.16	95	36.019	ENSMAMG00000018672	rab34a	77	36.019
ENSMAMG00000019230	si:dkey-16l2.16	77	36.313	ENSMAMG00000000238	rab32b	82	36.313
ENSMAMG00000019230	si:dkey-16l2.16	77	35.802	ENSMAMG00000005606	kras	95	32.597
ENSMAMG00000019230	si:dkey-16l2.16	69	49.007	ENSMAMG00000006640	-	62	49.007
ENSMAMG00000019230	si:dkey-16l2.16	98	40.670	ENSMAMG00000018533	-	99	38.605
ENSMAMG00000019230	si:dkey-16l2.16	97	51.471	ENSMAMG00000001408	rab1ba	99	51.471
ENSMAMG00000019230	si:dkey-16l2.16	54	35.088	ENSMAMG00000012997	RAP2B	93	34.921
ENSMAMG00000019230	si:dkey-16l2.16	85	47.191	ENSMAMG00000011973	rab30	88	47.191
ENSMAMG00000019230	si:dkey-16l2.16	76	45.912	ENSMAMG00000011549	rab2a	99	37.619
ENSMAMG00000019230	si:dkey-16l2.16	66	30.573	ENSMAMG00000014747	rasl11b	62	30.573
ENSMAMG00000019230	si:dkey-16l2.16	77	33.742	ENSMAMG00000013700	si:ch73-116o1.2	88	33.152
ENSMAMG00000019230	si:dkey-16l2.16	77	39.634	ENSMAMG00000009672	rab6ba	79	39.634
ENSMAMG00000019230	si:dkey-16l2.16	98	42.029	ENSMAMG00000021329	RAB39B	97	42.029
ENSMAMG00000019230	si:dkey-16l2.16	56	30.579	ENSMAMG00000013955	-	63	30.579
ENSMAMG00000019230	si:dkey-16l2.16	95	35.000	ENSMAMG00000020859	rab41	91	35.000
ENSMAMG00000019230	si:dkey-16l2.16	78	36.686	ENSMAMG00000006281	rheb	88	36.686
ENSMAMG00000019230	si:dkey-16l2.16	55	30.172	ENSMAMG00000002666	arl3	58	30.172
ENSMAMG00000019230	si:dkey-16l2.16	78	43.293	ENSMAMG00000012750	rab14	86	37.989
ENSMAMG00000019230	si:dkey-16l2.16	79	30.286	ENSMAMG00000004106	rras	87	30.286
ENSMAMG00000019230	si:dkey-16l2.16	88	43.455	ENSMAMG00000017431	zgc:101559	82	43.455
ENSMAMG00000019230	si:dkey-16l2.16	77	60.494	ENSMAMG00000018306	-	82	59.036
ENSMAMG00000019230	si:dkey-16l2.16	85	31.638	ENSMAMG00000008168	rabl2	77	31.638
ENSMAMG00000019230	si:dkey-16l2.16	78	39.053	ENSMAMG00000023962	RAB7A	81	39.053
ENSMAMG00000019230	si:dkey-16l2.16	78	49.091	ENSMAMG00000011131	-	78	48.503
ENSMAMG00000019230	si:dkey-16l2.16	55	30.508	ENSMAMG00000011635	arl4aa	59	30.508
ENSMAMG00000019230	si:dkey-16l2.16	97	36.364	ENSMAMG00000006963	RAB29	99	37.379
ENSMAMG00000019230	si:dkey-16l2.16	76	45.000	ENSMAMG00000012471	rab25a	75	45.000
ENSMAMG00000019230	si:dkey-16l2.16	82	34.659	ENSMAMG00000001320	si:cabz01085950.1	74	34.659
ENSMAMG00000019230	si:dkey-16l2.16	79	39.521	ENSMAMG00000022322	rab5c	89	35.821
ENSMAMG00000019230	si:dkey-16l2.16	82	34.483	ENSMAMG00000004359	hrasb	90	36.047
ENSMAMG00000019230	si:dkey-16l2.16	78	58.896	ENSMAMG00000020135	zgc:171927	76	59.259
ENSMAMG00000019230	si:dkey-16l2.16	79	31.285	ENSMAMG00000010217	rasl11a	69	31.285
ENSMAMG00000019230	si:dkey-16l2.16	78	38.728	ENSMAMG00000020286	-	81	38.728
ENSMAMG00000019230	si:dkey-16l2.16	82	42.286	ENSMAMG00000002296	rab42a	80	42.286
ENSMAMG00000019230	si:dkey-16l2.16	98	42.439	ENSMAMG00000010297	rab25b	93	42.439
ENSMAMG00000019230	si:dkey-16l2.16	86	43.956	ENSMAMG00000018445	rab18b	88	43.956
ENSMAMG00000019230	si:dkey-16l2.16	58	30.597	ENSMAMG00000019501	arfrp1	65	30.597
ENSMAMG00000019230	si:dkey-16l2.16	98	42.308	ENSMAMG00000017327	rab11a	96	42.308
ENSMAMG00000019230	si:dkey-16l2.16	98	40.191	ENSMAMG00000006378	rab11bb	99	38.140
ENSMAMG00000019230	si:dkey-16l2.16	81	41.279	ENSMAMG00000006862	rab12	71	41.279
ENSMAMG00000019230	si:dkey-16l2.16	78	39.053	ENSMAMG00000020246	-	81	39.053
ENSMAMG00000019230	si:dkey-16l2.16	85	36.559	ENSMAMG00000009927	rab9b	90	36.559
ENSMAMG00000019230	si:dkey-16l2.16	85	46.486	ENSMAMG00000000565	rab33a	79	46.486
ENSMAMG00000019230	si:dkey-16l2.16	83	48.851	ENSMAMG00000002795	rab15	82	48.851

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000019230	si:dkey-16l2.16	100	94.737	ENSAPOG00000008263	si:dkey-16l2.16	100	94.737	Acanthochromis_polyacanthus
ENSMAMG00000019230	si:dkey-16l2.16	100	96.172	ENSAOCG00000016825	si:dkey-16l2.16	100	96.172	Amphiprion_ocellaris
ENSMAMG00000019230	si:dkey-16l2.16	100	96.172	ENSAPEG00000006500	si:dkey-16l2.16	100	96.172	Amphiprion_percula
ENSMAMG00000019230	si:dkey-16l2.16	100	97.129	ENSATEG00000019238	si:dkey-16l2.16	100	97.129	Anabas_testudineus
ENSMAMG00000019230	si:dkey-16l2.16	100	93.780	ENSACLG00000018721	si:dkey-16l2.16	100	93.780	Astatotilapia_calliptera
ENSMAMG00000019230	si:dkey-16l2.16	100	93.301	ENSAMXG00000038243	si:dkey-16l2.16	100	93.301	Astyanax_mexicanus
ENSMAMG00000019230	si:dkey-16l2.16	56	96.610	ENSCSEG00000009988	si:dkey-16l2.16	90	96.610	Cynoglossus_semilaevis
ENSMAMG00000019230	si:dkey-16l2.16	100	94.737	ENSCVAG00000003537	si:dkey-16l2.16	100	94.737	Cyprinodon_variegatus
ENSMAMG00000019230	si:dkey-16l2.16	100	92.344	ENSDARG00000037967	si:dkey-16l2.16	99	97.458	Danio_rerio
ENSMAMG00000019230	si:dkey-16l2.16	99	87.560	ENSELUG00000023247	si:dkey-16l2.16	99	87.560	Esox_lucius
ENSMAMG00000019230	si:dkey-16l2.16	58	94.215	ENSFHEG00000000767	si:dkey-16l2.16	78	94.215	Fundulus_heteroclitus
ENSMAMG00000019230	si:dkey-16l2.16	77	83.851	ENSGMOG00000015174	si:dkey-16l2.16	98	83.851	Gadus_morhua
ENSMAMG00000019230	si:dkey-16l2.16	100	88.517	ENSGAFG00000005388	si:dkey-16l2.16	100	88.517	Gambusia_affinis
ENSMAMG00000019230	si:dkey-16l2.16	100	92.823	ENSGACG00000014915	si:dkey-16l2.16	98	92.823	Gasterosteus_aculeatus
ENSMAMG00000019230	si:dkey-16l2.16	100	94.258	ENSHBUG00000019261	si:dkey-16l2.16	100	94.258	Haplochromis_burtoni
ENSMAMG00000019230	si:dkey-16l2.16	100	93.301	ENSHCOG00000006538	si:dkey-16l2.16	100	93.301	Hippocampus_comes
ENSMAMG00000019230	si:dkey-16l2.16	100	92.344	ENSKMAG00000003494	si:dkey-16l2.16	100	92.344	Kryptolebias_marmoratus
ENSMAMG00000019230	si:dkey-16l2.16	100	96.172	ENSLBEG00000007681	si:dkey-16l2.16	100	96.172	Labrus_bergylta
ENSMAMG00000019230	si:dkey-16l2.16	100	93.780	ENSMZEG00005002081	si:dkey-16l2.16	100	93.780	Maylandia_zebra
ENSMAMG00000019230	si:dkey-16l2.16	99	95.146	ENSMMOG00000020140	si:dkey-16l2.16	97	95.146	Mola_mola
ENSMAMG00000019230	si:dkey-16l2.16	100	94.737	ENSMALG00000014727	si:dkey-16l2.16	99	94.737	Monopterus_albus
ENSMAMG00000019230	si:dkey-16l2.16	100	94.258	ENSNBRG00000008930	si:dkey-16l2.16	100	94.258	Neolamprologus_brichardi
ENSMAMG00000019230	si:dkey-16l2.16	100	93.780	ENSONIG00000009443	si:dkey-16l2.16	100	93.780	Oreochromis_niloticus
ENSMAMG00000019230	si:dkey-16l2.16	100	88.995	ENSORLG00000001098	si:dkey-16l2.16	99	88.995	Oryzias_latipes
ENSMAMG00000019230	si:dkey-16l2.16	100	88.995	ENSORLG00020000867	si:dkey-16l2.16	99	88.995	Oryzias_latipes_hni
ENSMAMG00000019230	si:dkey-16l2.16	100	90.431	ENSOMEG00000015474	si:dkey-16l2.16	100	91.388	Oryzias_melastigma
ENSMAMG00000019230	si:dkey-16l2.16	100	78.947	ENSPKIG00000018888	si:dkey-16l2.16	100	78.947	Paramormyrops_kingsleyae
ENSMAMG00000019230	si:dkey-16l2.16	100	90.909	ENSPKIG00000005686	-	100	90.909	Paramormyrops_kingsleyae
ENSMAMG00000019230	si:dkey-16l2.16	100	93.780	ENSPMGG00000000751	si:dkey-16l2.16	100	93.780	Periophthalmus_magnuspinnatus
ENSMAMG00000019230	si:dkey-16l2.16	100	88.995	ENSPFOG00000004746	si:dkey-16l2.16	100	88.995	Poecilia_formosa
ENSMAMG00000019230	si:dkey-16l2.16	100	88.517	ENSPLAG00000021043	si:dkey-16l2.16	100	88.517	Poecilia_latipinna
ENSMAMG00000019230	si:dkey-16l2.16	100	88.995	ENSPMEG00000007165	si:dkey-16l2.16	100	88.995	Poecilia_mexicana
ENSMAMG00000019230	si:dkey-16l2.16	100	88.517	ENSPREG00000005323	si:dkey-16l2.16	100	88.517	Poecilia_reticulata
ENSMAMG00000019230	si:dkey-16l2.16	100	94.258	ENSPNYG00000009490	si:dkey-16l2.16	100	94.258	Pundamilia_nyererei
ENSMAMG00000019230	si:dkey-16l2.16	100	94.258	ENSPNAG00000018986	si:dkey-16l2.16	100	94.258	Pygocentrus_nattereri
ENSMAMG00000019230	si:dkey-16l2.16	99	80.288	ENSSFOG00015006414	-	99	80.288	Scleropages_formosus
ENSMAMG00000019230	si:dkey-16l2.16	100	90.431	ENSSFOG00015021448	-	100	90.431	Scleropages_formosus
ENSMAMG00000019230	si:dkey-16l2.16	100	90.431	ENSSMAG00000011769	si:dkey-16l2.16	94	90.431	Scophthalmus_maximus
ENSMAMG00000019230	si:dkey-16l2.16	100	97.608	ENSSDUG00000005719	si:dkey-16l2.16	100	97.608	Seriola_dumerili
ENSMAMG00000019230	si:dkey-16l2.16	100	97.608	ENSSLDG00000003631	si:dkey-16l2.16	100	97.608	Seriola_lalandi_dorsalis
ENSMAMG00000019230	si:dkey-16l2.16	100	96.651	ENSSPAG00000006302	si:dkey-16l2.16	100	96.651	Stegastes_partitus
ENSMAMG00000019230	si:dkey-16l2.16	100	94.737	ENSTRUG00000025076	si:dkey-16l2.16	100	94.737	Takifugu_rubripes
ENSMAMG00000019230	si:dkey-16l2.16	100	94.258	ENSTNIG00000011300	si:dkey-16l2.16	100	94.258	Tetraodon_nigroviridis
ENSMAMG00000019230	si:dkey-16l2.16	100	88.995	ENSXMAG00000021767	si:dkey-16l2.16	100	88.995	Xiphophorus_maculatus