EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMAMG00000019476 (Gene tree)
Gene ID
113134098
Gene Symbol
-
Alias
-
Full Name
poly(U)-binding-splicing factor PUF60-like
Gene Type
protein_coding
Species
Mastacembelus_armatus
Status
putative
Strand
Plus strand
Length
10459 bases
Position
chrOOHQ01000035.1:24791911-24802369
Accession
113134098
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMAMP00000028922RRM_1PF00076.221e-4312
ENSMAMP00000028922RRM_1PF00076.221e-4322
ENSMAMP00000028928RRM_1PF00076.221e-4312
ENSMAMP00000028928RRM_1PF00076.221e-4322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMAMT00000029676-3819-ENSMAMP00000028928522 (aa)XP_026169118UPI000E462F6E
ENSMAMT00000029670-3905-ENSMAMP00000028922522 (aa)XP_026169118UPI000E462F6E
Gene Model
Click here to download ENSMAMG00000019476's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000019476's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMAMG00000019476-5834.314ENSMAMG00000020158-6734.314
ENSMAMG00000019476-6935.294ENSMAMG00000019817u2af2a6737.255
ENSMAMG00000019476-9982.950ENSMAMG00000010394puf60b10080.340
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMAMG00000019476-9981.973ENSG00000179950PUF6010083.109Homo_sapiens
ENSMAMG00000019476-10083.523ENSAPOG00000001713puf60b10083.333Acanthochromis_polyacanthus
ENSMAMG00000019476-9980.076ENSAMEG00000006406PUF609380.228Ailuropoda_melanoleuca
ENSMAMG00000019476-9888.845ENSACIG00000003263-10088.327Amphilophus_citrinellus
ENSMAMG00000019476-9883.883ENSACIG00000021705puf60b10083.495Amphilophus_citrinellus
ENSMAMG00000019476-10083.523ENSAOCG00000005395puf60b10084.078Amphiprion_ocellaris
ENSMAMG00000019476-10094.073ENSAOCG00000015558-10094.073Amphiprion_ocellaris
ENSMAMG00000019476-9881.008ENSAPEG00000001836-10082.046Amphiprion_percula
ENSMAMG00000019476-9979.463ENSAPEG00000011923puf60b9979.231Amphiprion_percula
ENSMAMG00000019476-10095.602ENSATEG00000006303-10095.602Anabas_testudineus
ENSMAMG00000019476-10083.333ENSATEG00000001730puf60b10082.955Anabas_testudineus
ENSMAMG00000019476-9982.353ENSAPLG00000010150PUF6010082.922Anas_platyrhynchos
ENSMAMG00000019476-9882.286ENSACAG00000001645PUF609682.443Anolis_carolinensis
ENSMAMG00000019476-9982.163ENSANAG00000018626PUF6010083.301Aotus_nancymaae
ENSMAMG00000019476-9883.883ENSACLG00000004462puf60b10083.495Astatotilapia_calliptera
ENSMAMG00000019476-9884.280ENSAMXG00000036570puf60a10081.550Astyanax_mexicanus
ENSMAMG00000019476-9877.230ENSAMXG00000041030puf60b10076.660Astyanax_mexicanus
ENSMAMG00000019476-9981.973ENSBTAG00000037493PUF609982.543Bos_taurus
ENSMAMG00000019476-7750.865WBGene00004389rnp-68350.495Caenorhabditis_elegans
ENSMAMG00000019476-9981.973ENSCJAG00000021485PUF609981.767Callithrix_jacchus
ENSMAMG00000019476-9981.784ENSCAFG00000001400PUF609382.163Canis_familiaris
ENSMAMG00000019476-9982.163ENSCAFG00020018754PUF609981.955Canis_lupus_dingo
ENSMAMG00000019476-9981.973ENSCHIG00000001618PUF608782.543Capra_hircus
ENSMAMG00000019476-9982.163ENSTSYG00000011912PUF6010083.301Carlito_syrichta
ENSMAMG00000019476-9977.589ENSCPOG00000014613PUF609478.154Cavia_porcellus
ENSMAMG00000019476-9981.391ENSCCAG00000007744PUF609981.579Cebus_capucinus
ENSMAMG00000019476-9981.973ENSCATG00000035405PUF609981.767Cercocebus_atys
ENSMAMG00000019476-9982.163ENSCLAG00000009154PUF609382.543Chinchilla_lanigera
ENSMAMG00000019476-9882.726ENSCSAG00000008878PUF6010083.109Chlorocebus_sabaeus
ENSMAMG00000019476-9883.301ENSCPBG00000005595PUF609982.453Chrysemys_picta_bellii
ENSMAMG00000019476-6158.631ENSCING00000002156-8758.806Ciona_intestinalis
ENSMAMG00000019476-9748.282ENSCING00000008436-9747.992Ciona_intestinalis
ENSMAMG00000019476-9553.920ENSCSAVG00000001385-9953.920Ciona_savignyi
ENSMAMG00000019476-9545.565ENSCSAVG00000004765-9748.485Ciona_savignyi
ENSMAMG00000019476-7982.701ENSCANG00000041843PUF6010083.412Colobus_angolensis_palliatus
ENSMAMG00000019476-9982.353ENSCGRG00001017442Puf609382.732Cricetulus_griseus_chok1gshd
ENSMAMG00000019476-9982.353ENSCGRG00000003717Puf609382.922Cricetulus_griseus_crigri
ENSMAMG00000019476-9982.308ENSCSEG00000014845-9183.077Cynoglossus_semilaevis
ENSMAMG00000019476-9983.716ENSCSEG00000019887puf60b9383.525Cynoglossus_semilaevis
ENSMAMG00000019476-9090.672ENSCVAG00000001560-9692.105Cyprinodon_variegatus
ENSMAMG00000019476-9883.301ENSCVAG00000009386puf60b10083.107Cyprinodon_variegatus
ENSMAMG00000019476-9877.298ENSDARG00000001241puf60b10088.281Danio_rerio
ENSMAMG00000019476-9883.525ENSDARG00000032175puf60a10089.451Danio_rerio
ENSMAMG00000019476-9768.472ENSDNOG00000043278PUF609169.052Dasypus_novemcinctus
ENSMAMG00000019476-9982.163ENSDORG00000004585Puf609582.543Dipodomys_ordii
ENSMAMG00000019476-9549.914FBgn0028577hfp9950.446Drosophila_melanogaster
ENSMAMG00000019476-9861.329ENSEBUG00000014291puf60b8462.351Eptatretus_burgeri
ENSMAMG00000019476-9569.400ENSEBUG00000005470-8869.138Eptatretus_burgeri
ENSMAMG00000019476-9982.163ENSEASG00005009695PUF609981.955Equus_asinus_asinus
ENSMAMG00000019476-9982.163ENSECAG00000024681PUF609882.143Equus_caballus
ENSMAMG00000019476-10080.483ENSELUG00000006507puf60b10078.755Esox_lucius
ENSMAMG00000019476-10087.358ENSELUG00000018443-10086.981Esox_lucius
ENSMAMG00000019476-9982.163ENSFCAG00000001045PUF6010083.301Felis_catus
ENSMAMG00000019476-9972.865ENSFALG00000001136PUF609873.814Ficedula_albicollis
ENSMAMG00000019476-9982.353ENSFDAG00000017177PUF609382.732Fukomys_damarensis
ENSMAMG00000019476-10082.955ENSFHEG00000020046puf60b10083.495Fundulus_heteroclitus
ENSMAMG00000019476-9391.581ENSFHEG00000021687PUF6010092.050Fundulus_heteroclitus
ENSMAMG00000019476-9969.011ENSGMOG00000006392puf60b10068.821Gadus_morhua
ENSMAMG00000019476-6588.081ENSGALG00000039901PUF609487.791Gallus_gallus
ENSMAMG00000019476-9888.063ENSGAFG00000004334-10088.063Gambusia_affinis
ENSMAMG00000019476-10082.955ENSGAFG00000021040puf60b10083.495Gambusia_affinis
ENSMAMG00000019476-10076.894ENSGACG00000001484-10078.039Gasterosteus_aculeatus
ENSMAMG00000019476-9971.673ENSGACG00000004717puf60b9971.483Gasterosteus_aculeatus
ENSMAMG00000019476-9883.301ENSGAGG00000013289PUF609282.642Gopherus_agassizii
ENSMAMG00000019476-9981.973ENSGGOG00000004646PUF609981.955Gorilla_gorilla
ENSMAMG00000019476-10083.144ENSHBUG00000015118puf60b10083.495Haplochromis_burtoni
ENSMAMG00000019476-10094.837ENSHBUG00000009634-10094.837Haplochromis_burtoni
ENSMAMG00000019476-9982.353ENSHGLG00000006111PUF609382.732Heterocephalus_glaber_female
ENSMAMG00000019476-9982.353ENSHGLG00100012362PUF609382.732Heterocephalus_glaber_male
ENSMAMG00000019476-9879.406ENSHCOG00000015541puf60b10080.037Hippocampus_comes
ENSMAMG00000019476-9674.502ENSHCOG00000000378-9973.231Hippocampus_comes
ENSMAMG00000019476-9878.343ENSIPUG00000004660puf60b10077.966Ictalurus_punctatus
ENSMAMG00000019476-9882.950ENSIPUG00000002453puf60a10083.333Ictalurus_punctatus
ENSMAMG00000019476-9982.163ENSSTOG00000025037PUF609482.543Ictidomys_tridecemlineatus
ENSMAMG00000019476-9982.353ENSJJAG00000001076Puf609382.732Jaculus_jaculus
ENSMAMG00000019476-9883.689ENSKMAG00000016745puf60b10083.495Kryptolebias_marmoratus
ENSMAMG00000019476-9887.548ENSKMAG00000010106-10087.548Kryptolebias_marmoratus
ENSMAMG00000019476-9980.998ENSLBEG00000012505puf60b10080.806Labrus_bergylta
ENSMAMG00000019476-6880.000ENSLACG00000005456PUF609980.874Latimeria_chalumnae
ENSMAMG00000019476-10086.389ENSLOCG00000010106puf60b10086.578Lepisosteus_oculatus
ENSMAMG00000019476-9981.214ENSLAFG00000022929PUF609481.594Loxodonta_africana
ENSMAMG00000019476-9982.008ENSMFAG00000043373PUF609982.386Macaca_fascicularis
ENSMAMG00000019476-9981.973ENSMMUG00000013558PUF609981.955Macaca_mulatta
ENSMAMG00000019476-9981.973ENSMNEG00000031099PUF609981.767Macaca_nemestrina
ENSMAMG00000019476-9882.726ENSMLEG00000040009PUF6010083.109Mandrillus_leucophaeus
ENSMAMG00000019476-9883.883ENSMZEG00005018515puf60b10083.495Maylandia_zebra
ENSMAMG00000019476-10094.646ENSMZEG00005019425-10094.646Maylandia_zebra
ENSMAMG00000019476-9982.075ENSMGAG00000013070PUF609588.116Meleagris_gallopavo
ENSMAMG00000019476-9366.600ENSMAUG00000018549-9567.606Mesocricetus_auratus
ENSMAMG00000019476-6886.376ENSMAUG00000014267-9085.831Mesocricetus_auratus
ENSMAMG00000019476-9982.163ENSMICG00000012226PUF609982.453Microcebus_murinus
ENSMAMG00000019476-9982.353ENSMOCG00000018780Puf609382.732Microtus_ochrogaster
ENSMAMG00000019476-9884.078ENSMMOG00000004217puf60b10083.883Mola_mola
ENSMAMG00000019476-9980.000ENSMMOG00000018059-9987.007Mola_mola
ENSMAMG00000019476-9981.594ENSMODG00000009161PUF609482.163Monodelphis_domestica
ENSMAMG00000019476-10095.602ENSMALG00000000200-10095.411Monopterus_albus
ENSMAMG00000019476-10075.901ENSMALG00000006797puf60b9976.392Monopterus_albus
ENSMAMG00000019476-9982.543MGP_CAROLIEiJ_G0019910Puf609382.922Mus_caroli
ENSMAMG00000019476-9982.543ENSMUSG00000002524Puf609382.922Mus_musculus
ENSMAMG00000019476-9982.543MGP_PahariEiJ_G0019920Puf609382.922Mus_pahari
ENSMAMG00000019476-9982.543MGP_SPRETEiJ_G0020812Puf609382.922Mus_spretus
ENSMAMG00000019476-9981.973ENSMPUG00000008137PUF609282.353Mustela_putorius_furo
ENSMAMG00000019476-9981.594ENSMLUG00000000238-9381.973Myotis_lucifugus
ENSMAMG00000019476-9976.460ENSMLUG00000013032-9976.226Myotis_lucifugus
ENSMAMG00000019476-9982.353ENSNGAG00000000712Puf6010083.685Nannospalax_galili
ENSMAMG00000019476-10094.828ENSNBRG00000017223-10094.828Neolamprologus_brichardi
ENSMAMG00000019476-8380.624ENSNBRG00000013047puf60b9782.578Neolamprologus_brichardi
ENSMAMG00000019476-9981.973ENSNLEG00000002156PUF609981.955Nomascus_leucogenys
ENSMAMG00000019476-7192.058ENSOPRG00000002147PUF607591.497Ochotona_princeps
ENSMAMG00000019476-7187.500ENSODEG00000014024-9087.500Octodon_degus
ENSMAMG00000019476-9562.253ENSODEG00000015513-9562.749Octodon_degus
ENSMAMG00000019476-10093.881ENSONIG00000014030-9993.881Oreochromis_niloticus
ENSMAMG00000019476-9983.685ENSONIG00000006247puf60b9883.301Oreochromis_niloticus
ENSMAMG00000019476-9767.451ENSOANG00000006962PUF609967.710Ornithorhynchus_anatinus
ENSMAMG00000019476-9890.097ENSORLG00000028655-9990.097Oryzias_latipes
ENSMAMG00000019476-10083.144ENSORLG00000012279puf60b10083.495Oryzias_latipes
ENSMAMG00000019476-10083.144ENSORLG00020007333puf6010083.495Oryzias_latipes_hni
ENSMAMG00000019476-9991.013ENSORLG00020018144-9991.013Oryzias_latipes_hni
ENSMAMG00000019476-10082.642ENSORLG00015007718puf60b10083.172Oryzias_latipes_hsok
ENSMAMG00000019476-9990.822ENSORLG00015016833-9990.822Oryzias_latipes_hsok
ENSMAMG00000019476-10080.891ENSOMEG00000001643puf60b9981.967Oryzias_melastigma
ENSMAMG00000019476-9991.762ENSOMEG00000022185-9992.352Oryzias_melastigma
ENSMAMG00000019476-9982.163ENSOGAG00000006259PUF609382.732Otolemur_garnettii
ENSMAMG00000019476-9980.344ENSOARG00000016235PUF609881.107Ovis_aries
ENSMAMG00000019476-9981.973ENSPPAG00000029933PUF609981.989Pan_paniscus
ENSMAMG00000019476-9982.163ENSPPRG00000003257PUF6010083.301Panthera_pardus
ENSMAMG00000019476-9979.737ENSPTIG00000009795PUF609980.075Panthera_tigris_altaica
ENSMAMG00000019476-9981.973ENSPTRG00000020670PUF609981.989Pan_troglodytes
ENSMAMG00000019476-9981.973ENSPTRG00000043963-9981.955Pan_troglodytes
ENSMAMG00000019476-9981.973ENSPANG00000021936PUF609981.767Papio_anubis
ENSMAMG00000019476-10086.252ENSPKIG00000004295puf60a10091.395Paramormyrops_kingsleyae
ENSMAMG00000019476-10085.199ENSPKIG00000012204puf60b10085.409Paramormyrops_kingsleyae
ENSMAMG00000019476-9981.973ENSPSIG00000004679PUF609982.353Pelodiscus_sinensis
ENSMAMG00000019476-9882.308ENSPMGG00000013444puf60b10081.923Periophthalmus_magnuspinnatus
ENSMAMG00000019476-9982.353ENSPEMG00000008820Puf609382.732Peromyscus_maniculatus_bairdii
ENSMAMG00000019476-10081.273ENSPCIG00000020270PUF609883.301Phascolarctos_cinereus
ENSMAMG00000019476-10082.955ENSPFOG00000019217puf60b9980.962Poecilia_formosa
ENSMAMG00000019476-10090.631ENSPFOG00000011118-10090.631Poecilia_formosa
ENSMAMG00000019476-9883.689ENSPLAG00000010754puf60b10083.495Poecilia_latipinna
ENSMAMG00000019476-10090.440ENSPLAG00000017025-9290.440Poecilia_latipinna
ENSMAMG00000019476-10091.013ENSPMEG00000009767-9291.013Poecilia_mexicana
ENSMAMG00000019476-10082.955ENSPMEG00000000838puf60b10083.495Poecilia_mexicana
ENSMAMG00000019476-10080.258ENSPREG00000005440puf60b10080.258Poecilia_reticulata
ENSMAMG00000019476-7981.235ENSPPYG00000018951-9582.185Pongo_abelii
ENSMAMG00000019476-7982.701ENSPCAG00000014837PUF6010083.412Procavia_capensis
ENSMAMG00000019476-9981.973ENSPCOG00000027981PUF609982.420Propithecus_coquereli
ENSMAMG00000019476-9891.195ENSPVAG00000016167PUF608190.566Pteropus_vampyrus
ENSMAMG00000019476-9883.883ENSPNYG00000002556puf60b10083.495Pundamilia_nyererei
ENSMAMG00000019476-10094.646ENSPNYG00000004273-10094.646Pundamilia_nyererei
ENSMAMG00000019476-9975.862ENSPNAG00000019415puf60b9175.432Pygocentrus_nattereri
ENSMAMG00000019476-9882.592ENSPNAG00000019909puf60a9982.398Pygocentrus_nattereri
ENSMAMG00000019476-9982.543ENSRNOG00000009960Puf609382.922Rattus_norvegicus
ENSMAMG00000019476-9981.973ENSRBIG00000035274PUF609981.955Rhinopithecus_bieti
ENSMAMG00000019476-9981.973ENSRROG00000029360PUF609982.353Rhinopithecus_roxellana
ENSMAMG00000019476-9980.645ENSSBOG00000027089PUF609980.488Saimiri_boliviensis_boliviensis
ENSMAMG00000019476-8882.590ENSSHAG00000006668PUF608983.227Sarcophilus_harrisii
ENSMAMG00000019476-10080.505ENSSFOG00015019371puf60a9886.815Scleropages_formosus
ENSMAMG00000019476-9879.087ENSSFOG00015019619puf60b9982.520Scleropages_formosus
ENSMAMG00000019476-7488.966ENSSMAG00000016381puf60b7888.599Scophthalmus_maximus
ENSMAMG00000019476-9981.955ENSSDUG00000009935puf60b9982.582Seriola_dumerili
ENSMAMG00000019476-9796.450ENSSDUG00000007048-9796.450Seriola_dumerili
ENSMAMG00000019476-9982.798ENSSLDG00000024011puf60b10081.474Seriola_lalandi_dorsalis
ENSMAMG00000019476-9892.843ENSSLDG00000007366-10093.177Seriola_lalandi_dorsalis
ENSMAMG00000019476-6476.176ENSSPUG00000013518PUF609275.516Sphenodon_punctatus
ENSMAMG00000019476-9895.108ENSSPAG00000020285-10095.890Stegastes_partitus
ENSMAMG00000019476-10080.996ENSSPAG00000012144puf60b10081.664Stegastes_partitus
ENSMAMG00000019476-9882.726ENSSSCG00000038800PUF6010078.858Sus_scrofa
ENSMAMG00000019476-9980.115ENSTGUG00000012797-10081.025Taeniopygia_guttata
ENSMAMG00000019476-9983.493ENSTRUG00000005420puf60b10081.285Takifugu_rubripes
ENSMAMG00000019476-9888.016ENSTRUG00000008843-10089.194Takifugu_rubripes
ENSMAMG00000019476-9983.877ENSTNIG00000013675puf60b9983.493Tetraodon_nigroviridis
ENSMAMG00000019476-9987.184ENSTNIG00000003069-9988.544Tetraodon_nigroviridis
ENSMAMG00000019476-6184.797ENSTBEG00000002751-9984.797Tupaia_belangeri
ENSMAMG00000019476-8166.571ENSTBEG00000001899-10068.000Tupaia_belangeri
ENSMAMG00000019476-9881.154ENSTTRG00000017088PUF6010082.534Tursiops_truncatus
ENSMAMG00000019476-9982.163ENSUAMG00000024917PUF609981.955Ursus_americanus
ENSMAMG00000019476-9977.230ENSUMAG00000000272PUF609377.419Ursus_maritimus
ENSMAMG00000019476-9982.163ENSVVUG00000022527PUF6010083.301Vulpes_vulpes
ENSMAMG00000019476-9881.574ENSXETG00000012469puf609781.382Xenopus_tropicalis
ENSMAMG00000019476-9881.165ENSXCOG00000012355puf60b10081.128Xiphophorus_couchianus
ENSMAMG00000019476-9986.486ENSXMAG00000010507-9986.486Xiphophorus_maculatus
ENSMAMG00000019476-10082.955ENSXMAG00000001862puf60b10083.495Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us