EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000019480 (Gene tree)
Gene ID: 113136641
Gene Symbol: rbfox1l
Alias: Fox-1|ZFmu1A11s|a2bp1l|hm:zeh0082|zeh0082
Full Name: RNA binding protein fox-1 homolog 1-like
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 14378 bases
Position: chrOOHQ01000011.1:2874672-2889049
Accession: 113136641
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000028955	Fox-1_C	PF12414.8	2e-34	1	1
ENSMAMP00000028955	RRM_1	PF00076.22	8e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000029703	-	5589	-	ENSMAMP00000028955	383 (aa)	XP_026173394	UPI000E45E488

Gene Model

Click here to download ENSMAMG00000019480's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000019480's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000019480	rbfox1l	63	65.019	ENSMAMG00000004293	rbfox2	75	54.737
ENSMAMG00000019480	rbfox1l	86	54.407	ENSMAMG00000019810	rbfox3b	84	60.448
ENSMAMG00000019480	rbfox1l	73	58.170	ENSMAMG00000003142	rbfox1	80	56.869
ENSMAMG00000019480	rbfox1l	63	60.837	ENSMAMG00000008980	-	69	58.013
ENSMAMG00000019480	rbfox1l	89	55.840	ENSMAMG00000020600	-	69	67.331

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000019480	rbfox1l	97	89.757	ENSAPOG00000016304	rbfox1l	98	89.757	Acanthochromis_polyacanthus
ENSMAMG00000019480	rbfox1l	100	82.768	ENSACIG00000006441	rbfox1l	100	82.768	Amphilophus_citrinellus
ENSMAMG00000019480	rbfox1l	83	85.849	ENSAOCG00000020938	rbfox1l	94	84.906	Amphiprion_ocellaris
ENSMAMG00000019480	rbfox1l	100	90.339	ENSAPEG00000008232	rbfox1l	100	90.339	Amphiprion_percula
ENSMAMG00000019480	rbfox1l	100	88.251	ENSATEG00000022649	rbfox1l	100	88.251	Anabas_testudineus
ENSMAMG00000019480	rbfox1l	64	72.332	ENSACAG00000011931	-	89	73.387	Anolis_carolinensis
ENSMAMG00000019480	rbfox1l	100	90.078	ENSACLG00000021394	rbfox1l	100	90.078	Astatotilapia_calliptera
ENSMAMG00000019480	rbfox1l	100	86.528	ENSAMXG00000010470	rbfox1l	100	84.715	Astyanax_mexicanus
ENSMAMG00000019480	rbfox1l	66	68.898	ENSCPBG00000010944	-	100	56.061	Chrysemys_picta_bellii
ENSMAMG00000019480	rbfox1l	100	88.542	ENSCSEG00000018898	rbfox1l	100	88.802	Cynoglossus_semilaevis
ENSMAMG00000019480	rbfox1l	100	89.556	ENSCVAG00000007986	rbfox1l	100	89.034	Cyprinodon_variegatus
ENSMAMG00000019480	rbfox1l	100	84.197	ENSDARG00000021184	rbfox1l	100	82.642	Danio_rerio
ENSMAMG00000019480	rbfox1l	100	83.461	ENSELUG00000015077	rbfox1l	100	83.461	Esox_lucius
ENSMAMG00000019480	rbfox1l	95	95.122	ENSFHEG00000016557	rbfox1l	95	95.122	Fundulus_heteroclitus
ENSMAMG00000019480	rbfox1l	100	82.768	ENSGMOG00000005040	rbfox1l	100	82.768	Gadus_morhua
ENSMAMG00000019480	rbfox1l	92	88.983	ENSGAFG00000013211	rbfox1l	97	88.983	Gambusia_affinis
ENSMAMG00000019480	rbfox1l	100	89.556	ENSGACG00000010757	rbfox1l	100	89.556	Gasterosteus_aculeatus
ENSMAMG00000019480	rbfox1l	71	65.942	ENSGAGG00000012440	-	84	71.020	Gopherus_agassizii
ENSMAMG00000019480	rbfox1l	100	90.078	ENSHBUG00000013406	rbfox1l	100	90.078	Haplochromis_burtoni
ENSMAMG00000019480	rbfox1l	100	86.198	ENSHCOG00000020771	rbfox1l	100	86.458	Hippocampus_comes
ENSMAMG00000019480	rbfox1l	99	77.749	ENSIPUG00000000065	rbfox1l	99	78.212	Ictalurus_punctatus
ENSMAMG00000019480	rbfox1l	100	89.610	ENSKMAG00000005146	rbfox1l	100	88.831	Kryptolebias_marmoratus
ENSMAMG00000019480	rbfox1l	100	91.906	ENSLBEG00000017089	rbfox1l	100	91.906	Labrus_bergylta
ENSMAMG00000019480	rbfox1l	100	90.078	ENSMZEG00005016374	rbfox1l	100	90.078	Maylandia_zebra
ENSMAMG00000019480	rbfox1l	100	88.512	ENSMMOG00000016530	rbfox1l	100	88.512	Mola_mola
ENSMAMG00000019480	rbfox1l	100	88.512	ENSMALG00000009384	rbfox1l	100	87.206	Monopterus_albus
ENSMAMG00000019480	rbfox1l	100	89.034	ENSNBRG00000003346	rbfox1l	100	89.034	Neolamprologus_brichardi
ENSMAMG00000019480	rbfox1l	100	90.339	ENSONIG00000012754	rbfox1l	100	90.339	Oreochromis_niloticus
ENSMAMG00000019480	rbfox1l	100	87.728	ENSORLG00000011269	rbfox1l	100	87.728	Oryzias_latipes
ENSMAMG00000019480	rbfox1l	100	88.512	ENSORLG00020000162	rbfox1l	100	88.512	Oryzias_latipes_hni
ENSMAMG00000019480	rbfox1l	100	88.512	ENSORLG00015013464	rbfox1l	100	88.512	Oryzias_latipes_hsok
ENSMAMG00000019480	rbfox1l	100	89.295	ENSOMEG00000010584	rbfox1l	100	89.295	Oryzias_melastigma
ENSMAMG00000019480	rbfox1l	100	87.240	ENSPKIG00000012029	rbfox1l	100	85.938	Paramormyrops_kingsleyae
ENSMAMG00000019480	rbfox1l	100	81.771	ENSPMGG00000012082	rbfox1l	100	79.167	Periophthalmus_magnuspinnatus
ENSMAMG00000019480	rbfox1l	100	90.862	ENSPFOG00000009338	rbfox1l	100	90.862	Poecilia_formosa
ENSMAMG00000019480	rbfox1l	85	80.734	ENSPLAG00000012816	rbfox1l	92	80.392	Poecilia_latipinna
ENSMAMG00000019480	rbfox1l	100	86.423	ENSPMEG00000017597	rbfox1l	100	85.640	Poecilia_mexicana
ENSMAMG00000019480	rbfox1l	100	86.423	ENSPREG00000007940	rbfox1l	100	85.640	Poecilia_reticulata
ENSMAMG00000019480	rbfox1l	100	89.817	ENSPNYG00000002098	rbfox1l	100	89.817	Pundamilia_nyererei
ENSMAMG00000019480	rbfox1l	100	84.755	ENSPNAG00000001620	rbfox1l	100	82.687	Pygocentrus_nattereri
ENSMAMG00000019480	rbfox1l	100	83.636	ENSSFOG00015000675	rbfox1l	100	82.597	Scleropages_formosus
ENSMAMG00000019480	rbfox1l	100	89.556	ENSSMAG00000013090	rbfox1l	100	89.556	Scophthalmus_maximus
ENSMAMG00000019480	rbfox1l	100	88.689	ENSSDUG00000008705	rbfox1l	100	88.432	Seriola_dumerili
ENSMAMG00000019480	rbfox1l	100	89.175	ENSSLDG00000022256	rbfox1l	100	88.918	Seriola_lalandi_dorsalis
ENSMAMG00000019480	rbfox1l	100	90.601	ENSSPAG00000016620	rbfox1l	100	90.601	Stegastes_partitus
ENSMAMG00000019480	rbfox1l	96	86.486	ENSTRUG00000015905	rbfox1l	100	85.135	Takifugu_rubripes
ENSMAMG00000019480	rbfox1l	65	81.784	ENSTNIG00000008088	rbfox1l	97	84.351	Tetraodon_nigroviridis
ENSMAMG00000019480	rbfox1l	100	90.862	ENSXMAG00000023471	rbfox1l	100	90.862	Xiphophorus_maculatus