EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000019687 (Gene tree)
Gene ID: 113142657
Gene Symbol: -
Alias: -
Full Name: serine/arginine-rich splicing factor 1
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 2182 bases
Position: chrOOHQ01000002.1:12927943-12930124
Accession: 113142657
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000029229	RRM_1	PF00076.22	5e-34	1	2
ENSMAMP00000029229	RRM_1	PF00076.22	5e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000029980	-	999	-	ENSMAMP00000029229	240 (aa)	XP_026183543	UPI000E45B1E0

Gene Model

Click here to download ENSMAMG00000019687's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000019687's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000019687	-	66	46.914	ENSMAMG00000004888	srsf4	69	43.548
ENSMAMG00000019687	-	78	37.864	ENSMAMG00000017161	srsf6a	57	39.713
ENSMAMG00000019687	-	80	92.857	ENSMAMG00000019691	-	81	92.857
ENSMAMG00000019687	-	80	38.350	ENSMAMG00000000192	srsf5a	73	39.171
ENSMAMG00000019687	-	72	71.186	ENSMAMG00000011581	srsf9	73	70.056
ENSMAMG00000019687	-	78	90.052	ENSMAMG00000018454	-	78	90.052
ENSMAMG00000019687	-	64	45.198	ENSMAMG00000002673	srsf5b	57	44.509

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000019687	-	100	85.081	ENSG00000136450	SRSF1	100	89.231	Homo_sapiens
ENSMAMG00000019687	-	78	89.529	ENSAPOG00000002748	-	78	89.529	Acanthochromis_polyacanthus
ENSMAMG00000019687	-	100	95.833	ENSAPOG00000008542	-	100	95.833	Acanthochromis_polyacanthus
ENSMAMG00000019687	-	80	91.099	ENSAMEG00000002635	SRSF1	79	91.099	Ailuropoda_melanoleuca
ENSMAMG00000019687	-	91	86.036	ENSACIG00000008091	srsf1a	83	90.526	Amphilophus_citrinellus
ENSMAMG00000019687	-	91	85.650	ENSAOCG00000010671	-	83	90.052	Amphiprion_ocellaris
ENSMAMG00000019687	-	80	91.626	ENSAOCG00000000337	-	82	90.148	Amphiprion_ocellaris
ENSMAMG00000019687	-	91	85.650	ENSAPEG00000009915	-	83	90.052	Amphiprion_percula
ENSMAMG00000019687	-	80	91.626	ENSAPEG00000023352	-	81	90.148	Amphiprion_percula
ENSMAMG00000019687	-	82	89.500	ENSATEG00000021567	-	81	92.268	Anabas_testudineus
ENSMAMG00000019687	-	78	90.052	ENSATEG00000022403	-	77	90.052	Anabas_testudineus
ENSMAMG00000019687	-	80	85.787	ENSACAG00000005542	-	79	88.325	Anolis_carolinensis
ENSMAMG00000019687	-	100	85.081	ENSANAG00000020583	-	99	88.889	Aotus_nancymaae
ENSMAMG00000019687	-	81	69.072	ENSANAG00000025417	-	75	68.063	Aotus_nancymaae
ENSMAMG00000019687	-	53	74.194	ENSAMXG00000024373	-	72	76.774	Astyanax_mexicanus
ENSMAMG00000019687	-	94	83.264	ENSAMXG00000035996	srsf1a	79	87.940	Astyanax_mexicanus
ENSMAMG00000019687	-	100	85.081	ENSBTAG00000014766	SRSF1	79	90.355	Bos_taurus
ENSMAMG00000019687	-	79	82.143	ENSCJAG00000008111	-	88	82.741	Callithrix_jacchus
ENSMAMG00000019687	-	100	85.081	ENSCJAG00000041713	-	99	88.889	Callithrix_jacchus
ENSMAMG00000019687	-	100	85.081	ENSCAFG00000017430	SRSF1	78	90.355	Canis_familiaris
ENSMAMG00000019687	-	100	85.081	ENSCAFG00020025632	-	78	90.355	Canis_lupus_dingo
ENSMAMG00000019687	-	80	87.817	ENSCHIG00000010787	SRSF1	79	90.355	Capra_hircus
ENSMAMG00000019687	-	100	85.081	ENSTSYG00000013899	-	99	88.889	Carlito_syrichta
ENSMAMG00000019687	-	100	85.081	ENSCPOG00000032681	-	79	90.355	Cavia_porcellus
ENSMAMG00000019687	-	100	85.081	ENSCCAG00000029484	-	99	88.889	Cebus_capucinus
ENSMAMG00000019687	-	100	85.081	ENSCATG00000042294	-	99	88.889	Cercocebus_atys
ENSMAMG00000019687	-	100	85.081	ENSCLAG00000014707	-	79	90.355	Chinchilla_lanigera
ENSMAMG00000019687	-	100	84.274	ENSCSAG00000005642	-	78	89.340	Chlorocebus_sabaeus
ENSMAMG00000019687	-	80	87.817	ENSCHOG00000001899	SRSF1	79	90.355	Choloepus_hoffmanni
ENSMAMG00000019687	-	100	83.871	ENSCPBG00000009851	-	79	88.832	Chrysemys_picta_bellii
ENSMAMG00000019687	-	100	85.081	ENSCANG00000029726	-	99	88.889	Colobus_angolensis_palliatus
ENSMAMG00000019687	-	100	85.081	ENSCGRG00001000670	Srsf1	78	90.355	Cricetulus_griseus_chok1gshd
ENSMAMG00000019687	-	100	85.081	ENSCGRG00000005590	Srsf1	79	90.355	Cricetulus_griseus_crigri
ENSMAMG00000019687	-	79	83.962	ENSCSEG00000009973	-	81	81.604	Cynoglossus_semilaevis
ENSMAMG00000019687	-	78	90.374	ENSCSEG00000014272	-	81	90.374	Cynoglossus_semilaevis
ENSMAMG00000019687	-	78	90.052	ENSCVAG00000018617	-	78	90.052	Cyprinodon_variegatus
ENSMAMG00000019687	-	78	90.256	ENSCVAG00000005458	-	91	89.071	Cyprinodon_variegatus
ENSMAMG00000019687	-	78	82.353	ENSDARG00000057691	srsf1a	99	84.817	Danio_rerio
ENSMAMG00000019687	-	78	88.144	ENSDARG00000017843	srsf1b	79	89.691	Danio_rerio
ENSMAMG00000019687	-	100	85.081	ENSDNOG00000011737	-	78	90.355	Dasypus_novemcinctus
ENSMAMG00000019687	-	100	85.081	ENSDORG00000015082	Srsf1	79	90.355	Dipodomys_ordii
ENSMAMG00000019687	-	74	88.587	ENSETEG00000005349	-	63	89.130	Echinops_telfairi
ENSMAMG00000019687	-	100	85.081	ENSEASG00005002922	-	78	90.355	Equus_asinus_asinus
ENSMAMG00000019687	-	80	87.817	ENSECAG00000016654	SRSF1	79	90.355	Equus_caballus
ENSMAMG00000019687	-	74	89.674	ENSEEUG00000009255	-	63	90.761	Erinaceus_europaeus
ENSMAMG00000019687	-	78	88.083	ENSELUG00000021646	srsf1a	77	88.601	Esox_lucius
ENSMAMG00000019687	-	100	85.081	ENSFCAG00000002250	-	92	88.587	Felis_catus
ENSMAMG00000019687	-	79	87.719	ENSFALG00000005062	-	78	70.558	Ficedula_albicollis
ENSMAMG00000019687	-	100	85.081	ENSFDAG00000010646	-	79	90.355	Fukomys_damarensis
ENSMAMG00000019687	-	91	85.650	ENSFHEG00000003174	srsf1a	83	90.052	Fundulus_heteroclitus
ENSMAMG00000019687	-	92	88.636	ENSGMOG00000014787	-	80	88.770	Gadus_morhua
ENSMAMG00000019687	-	80	86.294	ENSGALG00000005525	SRSF1	79	88.832	Gallus_gallus
ENSMAMG00000019687	-	80	91.099	ENSGACG00000020621	srsf1b	80	88.482	Gasterosteus_aculeatus
ENSMAMG00000019687	-	100	83.871	ENSGAGG00000022965	-	78	88.832	Gopherus_agassizii
ENSMAMG00000019687	-	100	85.081	ENSGGOG00000004386	SRSF1	99	88.889	Gorilla_gorilla
ENSMAMG00000019687	-	91	86.036	ENSHBUG00000016788	srsf1a	80	90.526	Haplochromis_burtoni
ENSMAMG00000019687	-	66	88.415	ENSHGLG00000000669	-	76	91.463	Heterocephalus_glaber_female
ENSMAMG00000019687	-	66	88.415	ENSHGLG00000000600	-	76	91.463	Heterocephalus_glaber_female
ENSMAMG00000019687	-	100	85.081	ENSHGLG00100016906	-	79	90.355	Heterocephalus_glaber_male
ENSMAMG00000019687	-	78	83.249	ENSHCOG00000018918	srsf1a	77	84.264	Hippocampus_comes
ENSMAMG00000019687	-	80	87.755	ENSIPUG00000008750	srsf1b	80	90.306	Ictalurus_punctatus
ENSMAMG00000019687	-	94	81.590	ENSIPUG00000017039	srsf1a	79	86.432	Ictalurus_punctatus
ENSMAMG00000019687	-	100	85.081	ENSSTOG00000000243	-	92	88.587	Ictidomys_tridecemlineatus
ENSMAMG00000019687	-	100	85.081	ENSJJAG00000000102	-	79	90.355	Jaculus_jaculus
ENSMAMG00000019687	-	50	80.159	ENSJJAG00000014464	-	95	83.333	Jaculus_jaculus
ENSMAMG00000019687	-	78	89.062	ENSKMAG00000019232	srsf1a	78	89.583	Kryptolebias_marmoratus
ENSMAMG00000019687	-	91	84.753	ENSLBEG00000020864	-	83	89.005	Labrus_bergylta
ENSMAMG00000019687	-	80	82.500	ENSLBEG00000015294	-	80	83.000	Labrus_bergylta
ENSMAMG00000019687	-	78	86.528	ENSLACG00000014160	srsf1a	73	86.528	Latimeria_chalumnae
ENSMAMG00000019687	-	80	87.245	ENSLOCG00000005994	srsf1a	79	89.286	Lepisosteus_oculatus
ENSMAMG00000019687	-	80	90.052	ENSLAFG00000025743	SRSF1	79	90.355	Loxodonta_africana
ENSMAMG00000019687	-	100	85.081	ENSMFAG00000040003	-	99	88.889	Macaca_fascicularis
ENSMAMG00000019687	-	100	82.258	ENSMMUG00000003260	-	95	85.714	Macaca_mulatta
ENSMAMG00000019687	-	100	85.081	ENSMMUG00000004725	SRSF1	99	88.889	Macaca_mulatta
ENSMAMG00000019687	-	100	81.855	ENSMNEG00000015983	-	78	86.802	Macaca_nemestrina
ENSMAMG00000019687	-	100	85.081	ENSMNEG00000027680	-	99	88.889	Macaca_nemestrina
ENSMAMG00000019687	-	80	87.817	ENSMLEG00000040509	SRSF1	79	90.355	Mandrillus_leucophaeus
ENSMAMG00000019687	-	100	83.128	ENSMLEG00000015243	-	77	88.021	Mandrillus_leucophaeus
ENSMAMG00000019687	-	100	85.081	ENSMAUG00000021845	Srsf1	79	90.355	Mesocricetus_auratus
ENSMAMG00000019687	-	100	85.081	ENSMICG00000013639	-	99	88.889	Microcebus_murinus
ENSMAMG00000019687	-	100	85.081	ENSMOCG00000001996	Srsf1	79	90.355	Microtus_ochrogaster
ENSMAMG00000019687	-	91	84.753	ENSMMOG00000014354	srsf1a	83	88.482	Mola_mola
ENSMAMG00000019687	-	74	89.189	ENSMODG00000014781	-	63	89.730	Monodelphis_domestica
ENSMAMG00000019687	-	78	90.052	ENSMALG00000017129	-	75	90.052	Monopterus_albus
ENSMAMG00000019687	-	83	80.808	ENSMALG00000007763	-	79	84.293	Monopterus_albus
ENSMAMG00000019687	-	100	85.081	MGP_CAROLIEiJ_G0016943	Srsf1	92	88.587	Mus_caroli
ENSMAMG00000019687	-	100	85.081	ENSMUSG00000018379	Srsf1	92	88.587	Mus_musculus
ENSMAMG00000019687	-	100	85.081	MGP_PahariEiJ_G0018074	Srsf1	70	100.000	Mus_pahari
ENSMAMG00000019687	-	100	85.081	MGP_SPRETEiJ_G0017790	Srsf1	92	88.587	Mus_spretus
ENSMAMG00000019687	-	80	87.817	ENSMPUG00000015369	SRSF1	79	90.355	Mustela_putorius_furo
ENSMAMG00000019687	-	80	87.817	ENSMLUG00000011040	SRSF1	79	90.355	Myotis_lucifugus
ENSMAMG00000019687	-	82	88.832	ENSMLUG00000023995	-	79	89.005	Myotis_lucifugus
ENSMAMG00000019687	-	80	87.817	ENSNGAG00000011395	Srsf1	79	90.355	Nannospalax_galili
ENSMAMG00000019687	-	100	80.408	ENSNBRG00000008041	srsf1b	80	82.723	Neolamprologus_brichardi
ENSMAMG00000019687	-	100	85.081	ENSNLEG00000008088	-	99	88.889	Nomascus_leucogenys
ENSMAMG00000019687	-	50	84.252	ENSMEUG00000002783	-	100	81.890	Notamacropus_eugenii
ENSMAMG00000019687	-	53	87.121	ENSOPRG00000001234	-	72	90.152	Ochotona_princeps
ENSMAMG00000019687	-	99	85.020	ENSODEG00000011481	-	79	89.848	Octodon_degus
ENSMAMG00000019687	-	95	89.744	ENSONIG00000004860	-	81	91.837	Oreochromis_niloticus
ENSMAMG00000019687	-	78	90.526	ENSONIG00000013160	-	77	90.526	Oreochromis_niloticus
ENSMAMG00000019687	-	100	68.826	ENSOCUG00000010894	-	77	72.487	Oryctolagus_cuniculus
ENSMAMG00000019687	-	78	90.052	ENSORLG00000004580	srsf1a	78	90.052	Oryzias_latipes
ENSMAMG00000019687	-	91	85.650	ENSORLG00020009456	srsf1a	83	90.052	Oryzias_latipes_hni
ENSMAMG00000019687	-	91	85.650	ENSORLG00015014384	srsf1a	83	90.052	Oryzias_latipes_hsok
ENSMAMG00000019687	-	71	88.506	ENSOMEG00000004106	srsf1a	71	88.506	Oryzias_melastigma
ENSMAMG00000019687	-	92	81.498	ENSOGAG00000025950	-	79	90.355	Otolemur_garnettii
ENSMAMG00000019687	-	80	90.576	ENSOARG00000008323	SRSF1	78	90.052	Ovis_aries
ENSMAMG00000019687	-	100	85.081	ENSPPAG00000043403	-	99	88.889	Pan_paniscus
ENSMAMG00000019687	-	100	85.081	ENSPPRG00000004238	-	92	88.587	Panthera_pardus
ENSMAMG00000019687	-	100	85.081	ENSPTRG00000049077	SRSF1	99	88.889	Pan_troglodytes
ENSMAMG00000019687	-	100	85.081	ENSPANG00000022305	-	99	88.889	Papio_anubis
ENSMAMG00000019687	-	100	70.833	ENSPANG00000030275	-	75	67.895	Papio_anubis
ENSMAMG00000019687	-	78	87.500	ENSPKIG00000007204	srsf1a	83	89.005	Paramormyrops_kingsleyae
ENSMAMG00000019687	-	80	87.755	ENSPKIG00000012857	srsf1b	80	89.796	Paramormyrops_kingsleyae
ENSMAMG00000019687	-	80	78.894	ENSPSIG00000009000	-	80	81.407	Pelodiscus_sinensis
ENSMAMG00000019687	-	81	91.237	ENSPMGG00000005467	-	78	93.583	Periophthalmus_magnuspinnatus
ENSMAMG00000019687	-	91	86.301	ENSPMGG00000013112	-	82	89.840	Periophthalmus_magnuspinnatus
ENSMAMG00000019687	-	100	85.081	ENSPEMG00000021416	Srsf1	79	90.355	Peromyscus_maniculatus_bairdii
ENSMAMG00000019687	-	80	87.374	ENSPCIG00000006076	-	80	89.394	Phascolarctos_cinereus
ENSMAMG00000019687	-	80	90.404	ENSPFOG00000018325	-	70	90.206	Poecilia_formosa
ENSMAMG00000019687	-	80	90.404	ENSPLAG00000008416	srsf1b	79	90.206	Poecilia_latipinna
ENSMAMG00000019687	-	80	90.404	ENSPMEG00000002388	-	79	90.206	Poecilia_mexicana
ENSMAMG00000019687	-	78	90.052	ENSPREG00000009667	srsf1a	78	90.052	Poecilia_reticulata
ENSMAMG00000019687	-	100	85.081	ENSPPYG00000008240	SRSF1	79	90.355	Pongo_abelii
ENSMAMG00000019687	-	80	87.817	ENSPCAG00000005199	SRSF1	79	90.355	Procavia_capensis
ENSMAMG00000019687	-	100	85.081	ENSPCOG00000023654	-	99	88.889	Propithecus_coquereli
ENSMAMG00000019687	-	80	71.782	ENSPCOG00000025736	-	95	70.352	Propithecus_coquereli
ENSMAMG00000019687	-	56	98.571	ENSPVAG00000000519	-	54	98.571	Pteropus_vampyrus
ENSMAMG00000019687	-	94	87.446	ENSPNAG00000022241	srsf1a	78	91.623	Pygocentrus_nattereri
ENSMAMG00000019687	-	80	89.062	ENSPNAG00000014601	srsf1b	80	90.625	Pygocentrus_nattereri
ENSMAMG00000019687	-	80	87.817	ENSRNOG00000050323	Srsf1	79	90.355	Rattus_norvegicus
ENSMAMG00000019687	-	100	85.081	ENSRBIG00000034445	-	99	88.889	Rhinopithecus_bieti
ENSMAMG00000019687	-	100	85.081	ENSRROG00000041506	-	99	88.889	Rhinopithecus_roxellana
ENSMAMG00000019687	-	100	85.081	ENSSBOG00000025377	-	99	88.889	Saimiri_boliviensis_boliviensis
ENSMAMG00000019687	-	80	87.374	ENSSHAG00000002552	-	80	89.394	Sarcophilus_harrisii
ENSMAMG00000019687	-	79	89.691	ENSSFOG00015004800	srsf1a	79	90.206	Scleropages_formosus
ENSMAMG00000019687	-	78	88.482	ENSSMAG00000007018	-	78	88.482	Scophthalmus_maximus
ENSMAMG00000019687	-	80	89.216	ENSSMAG00000009719	-	80	87.255	Scophthalmus_maximus
ENSMAMG00000019687	-	91	84.753	ENSSDUG00000011303	-	83	89.005	Seriola_dumerili
ENSMAMG00000019687	-	100	75.100	ENSSDUG00000003929	-	84	81.500	Seriola_dumerili
ENSMAMG00000019687	-	78	89.005	ENSSLDG00000010543	-	78	89.005	Seriola_lalandi_dorsalis
ENSMAMG00000019687	-	80	84.375	ENSSLDG00000016868	-	78	85.417	Seriola_lalandi_dorsalis
ENSMAMG00000019687	-	95	76.395	ENSSLDG00000016895	-	78	84.946	Seriola_lalandi_dorsalis
ENSMAMG00000019687	-	74	89.674	ENSSARG00000010949	-	63	90.761	Sorex_araneus
ENSMAMG00000019687	-	100	83.871	ENSSPUG00000000804	-	93	86.957	Sphenodon_punctatus
ENSMAMG00000019687	-	80	88.995	ENSSPAG00000014152	-	81	86.603	Stegastes_partitus
ENSMAMG00000019687	-	78	89.583	ENSSPAG00000022562	-	78	89.583	Stegastes_partitus
ENSMAMG00000019687	-	100	85.081	ENSSSCG00000017626	-	79	90.355	Sus_scrofa
ENSMAMG00000019687	-	53	84.962	ENSTGUG00000008416	-	72	87.970	Taeniopygia_guttata
ENSMAMG00000019687	-	78	89.005	ENSTRUG00000003691	srsf1a	78	89.005	Takifugu_rubripes
ENSMAMG00000019687	-	78	89.005	ENSTNIG00000016223	srsf1a	77	89.005	Tetraodon_nigroviridis
ENSMAMG00000019687	-	74	85.870	ENSTBEG00000015378	-	63	89.130	Tupaia_belangeri
ENSMAMG00000019687	-	53	87.121	ENSTTRG00000007310	SRSF1	72	90.152	Tursiops_truncatus
ENSMAMG00000019687	-	80	87.817	ENSUAMG00000009858	SRSF1	79	90.355	Ursus_americanus
ENSMAMG00000019687	-	100	85.081	ENSUMAG00000000455	-	78	90.355	Ursus_maritimus
ENSMAMG00000019687	-	80	87.310	ENSVPAG00000010094	SRSF1	79	89.340	Vicugna_pacos
ENSMAMG00000019687	-	100	85.081	ENSVVUG00000011882	-	78	90.355	Vulpes_vulpes
ENSMAMG00000019687	-	80	92.670	ENSXETG00000008954	srsf1	71	92.670	Xenopus_tropicalis
ENSMAMG00000019687	-	78	90.052	ENSXMAG00000011766	srsf1a	78	90.052	Xiphophorus_maculatus