EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000019691 (Gene tree)
Gene ID: 113142655
Gene Symbol: -
Alias: -
Full Name: serine/arginine-rich splicing factor 1B
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 3729 bases
Position: chrOOHQ01000002.1:12932535-12936263
Accession: 113142655
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000029234	RRM_1	PF00076.22	5.1e-33	1	2
ENSMAMP00000029234	RRM_1	PF00076.22	5.1e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000029985	-	2586	-	ENSMAMP00000029234	241 (aa)	XP_026183539	UPI000E465D1F

Gene Model

Click here to download ENSMAMG00000019691's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000019691's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000019691	-	68	44.253	ENSMAMG00000000192	srsf5a	61	41.243
ENSMAMG00000019691	-	80	91.667	ENSMAMG00000018454	-	78	92.188
ENSMAMG00000019691	-	90	62.212	ENSMAMG00000011581	srsf9	73	70.225
ENSMAMG00000019691	-	68	47.273	ENSMAMG00000004888	srsf4	69	46.774
ENSMAMG00000019691	-	66	48.837	ENSMAMG00000002673	srsf5b	57	47.159
ENSMAMG00000019691	-	81	92.857	ENSMAMG00000019687	-	80	92.857

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000019691	-	100	88.211	ENSG00000136450	SRSF1	100	95.385	Homo_sapiens
ENSMAMG00000019691	-	81	92.347	ENSAPOG00000008542	-	81	92.118	Acanthochromis_polyacanthus
ENSMAMG00000019691	-	80	91.146	ENSAPOG00000002748	-	78	91.667	Acanthochromis_polyacanthus
ENSMAMG00000019691	-	81	91.837	ENSAMEG00000002635	SRSF1	79	92.857	Ailuropoda_melanoleuca
ENSMAMG00000019691	-	80	91.667	ENSACIG00000008091	srsf1a	83	92.188	Amphilophus_citrinellus
ENSMAMG00000019691	-	81	92.118	ENSAOCG00000000337	-	82	92.118	Amphiprion_ocellaris
ENSMAMG00000019691	-	80	91.667	ENSAOCG00000010671	-	83	92.188	Amphiprion_ocellaris
ENSMAMG00000019691	-	80	91.667	ENSAPEG00000009915	-	83	92.188	Amphiprion_percula
ENSMAMG00000019691	-	81	92.118	ENSAPEG00000023352	-	81	92.118	Amphiprion_percula
ENSMAMG00000019691	-	95	89.912	ENSATEG00000021567	-	81	92.347	Anabas_testudineus
ENSMAMG00000019691	-	80	91.667	ENSATEG00000022403	-	77	92.188	Anabas_testudineus
ENSMAMG00000019691	-	81	90.863	ENSACAG00000005542	-	79	93.909	Anolis_carolinensis
ENSMAMG00000019691	-	100	88.211	ENSANAG00000020583	-	99	94.444	Aotus_nancymaae
ENSMAMG00000019691	-	83	68.844	ENSANAG00000025417	-	75	67.857	Aotus_nancymaae
ENSMAMG00000019691	-	55	80.645	ENSAMXG00000024373	-	72	80.645	Astyanax_mexicanus
ENSMAMG00000019691	-	95	86.192	ENSAMXG00000035996	srsf1a	79	93.467	Astyanax_mexicanus
ENSMAMG00000019691	-	100	88.211	ENSBTAG00000014766	SRSF1	79	94.924	Bos_taurus
ENSMAMG00000019691	-	100	88.211	ENSCJAG00000041713	-	99	94.444	Callithrix_jacchus
ENSMAMG00000019691	-	81	85.714	ENSCJAG00000008111	-	88	87.310	Callithrix_jacchus
ENSMAMG00000019691	-	100	88.211	ENSCAFG00000017430	SRSF1	78	94.924	Canis_familiaris
ENSMAMG00000019691	-	100	88.211	ENSCAFG00020025632	-	78	94.924	Canis_lupus_dingo
ENSMAMG00000019691	-	81	91.878	ENSCHIG00000010787	SRSF1	79	94.924	Capra_hircus
ENSMAMG00000019691	-	100	88.211	ENSTSYG00000013899	-	99	94.444	Carlito_syrichta
ENSMAMG00000019691	-	100	88.211	ENSCPOG00000032681	-	79	94.924	Cavia_porcellus
ENSMAMG00000019691	-	100	88.211	ENSCCAG00000029484	-	99	94.444	Cebus_capucinus
ENSMAMG00000019691	-	100	88.211	ENSCATG00000042294	-	99	94.444	Cercocebus_atys
ENSMAMG00000019691	-	100	88.211	ENSCLAG00000014707	-	79	94.924	Chinchilla_lanigera
ENSMAMG00000019691	-	100	87.398	ENSCSAG00000005642	-	78	93.909	Chlorocebus_sabaeus
ENSMAMG00000019691	-	81	91.878	ENSCHOG00000001899	SRSF1	79	94.924	Choloepus_hoffmanni
ENSMAMG00000019691	-	100	87.805	ENSCPBG00000009851	-	79	94.416	Chrysemys_picta_bellii
ENSMAMG00000019691	-	100	88.211	ENSCANG00000029726	-	99	94.444	Colobus_angolensis_palliatus
ENSMAMG00000019691	-	100	88.211	ENSCGRG00001000670	Srsf1	78	94.924	Cricetulus_griseus_chok1gshd
ENSMAMG00000019691	-	100	88.211	ENSCGRG00000005590	Srsf1	79	94.924	Cricetulus_griseus_crigri
ENSMAMG00000019691	-	80	90.306	ENSCSEG00000014272	-	81	89.062	Cynoglossus_semilaevis
ENSMAMG00000019691	-	81	83.962	ENSCSEG00000009973	-	81	83.962	Cynoglossus_semilaevis
ENSMAMG00000019691	-	80	91.667	ENSCVAG00000018617	-	78	92.188	Cyprinodon_variegatus
ENSMAMG00000019691	-	80	89.744	ENSCVAG00000005458	-	91	88.525	Cyprinodon_variegatus
ENSMAMG00000019691	-	80	92.784	ENSDARG00000017843	srsf1b	79	95.361	Danio_rerio
ENSMAMG00000019691	-	80	87.745	ENSDARG00000057691	srsf1a	99	89.529	Danio_rerio
ENSMAMG00000019691	-	100	88.211	ENSDNOG00000011737	-	78	94.924	Dasypus_novemcinctus
ENSMAMG00000019691	-	100	88.211	ENSDORG00000015082	Srsf1	79	94.924	Dipodomys_ordii
ENSMAMG00000019691	-	76	90.761	ENSETEG00000005349	-	63	91.848	Echinops_telfairi
ENSMAMG00000019691	-	100	88.211	ENSEASG00005002922	-	78	94.924	Equus_asinus_asinus
ENSMAMG00000019691	-	81	91.878	ENSECAG00000016654	SRSF1	79	94.924	Equus_caballus
ENSMAMG00000019691	-	76	91.848	ENSEEUG00000009255	-	63	93.478	Erinaceus_europaeus
ENSMAMG00000019691	-	80	92.746	ENSELUG00000021646	srsf1a	77	92.746	Esox_lucius
ENSMAMG00000019691	-	100	88.211	ENSFCAG00000002250	-	92	93.478	Felis_catus
ENSMAMG00000019691	-	77	94.737	ENSFALG00000005062	-	78	73.604	Ficedula_albicollis
ENSMAMG00000019691	-	100	88.211	ENSFDAG00000010646	-	79	94.924	Fukomys_damarensis
ENSMAMG00000019691	-	80	91.667	ENSFHEG00000003174	srsf1a	83	92.188	Fundulus_heteroclitus
ENSMAMG00000019691	-	93	90.135	ENSGMOG00000014787	-	80	90.104	Gadus_morhua
ENSMAMG00000019691	-	81	91.371	ENSGALG00000005525	SRSF1	79	94.416	Gallus_gallus
ENSMAMG00000019691	-	81	87.755	ENSGACG00000020621	srsf1b	80	87.245	Gasterosteus_aculeatus
ENSMAMG00000019691	-	100	87.805	ENSGAGG00000022965	-	78	94.416	Gopherus_agassizii
ENSMAMG00000019691	-	100	88.211	ENSGGOG00000004386	SRSF1	99	94.444	Gorilla_gorilla
ENSMAMG00000019691	-	80	91.667	ENSHBUG00000016788	srsf1a	80	92.188	Haplochromis_burtoni
ENSMAMG00000019691	-	68	91.463	ENSHGLG00000000669	-	76	95.122	Heterocephalus_glaber_female
ENSMAMG00000019691	-	68	91.463	ENSHGLG00000000600	-	76	95.122	Heterocephalus_glaber_female
ENSMAMG00000019691	-	100	88.211	ENSHGLG00100016906	-	79	94.924	Heterocephalus_glaber_male
ENSMAMG00000019691	-	80	85.787	ENSHCOG00000018918	srsf1a	77	88.325	Hippocampus_comes
ENSMAMG00000019691	-	80	89.447	ENSIPUG00000017039	srsf1a	79	91.960	Ictalurus_punctatus
ENSMAMG00000019691	-	81	95.408	ENSIPUG00000008750	srsf1b	80	95.408	Ictalurus_punctatus
ENSMAMG00000019691	-	100	88.211	ENSSTOG00000000243	-	92	93.478	Ictidomys_tridecemlineatus
ENSMAMG00000019691	-	52	88.095	ENSJJAG00000014464	-	95	88.095	Jaculus_jaculus
ENSMAMG00000019691	-	100	88.211	ENSJJAG00000000102	-	79	94.924	Jaculus_jaculus
ENSMAMG00000019691	-	80	92.708	ENSKMAG00000019232	srsf1a	78	92.708	Kryptolebias_marmoratus
ENSMAMG00000019691	-	80	90.625	ENSLBEG00000020864	-	83	91.146	Labrus_bergylta
ENSMAMG00000019691	-	95	84.914	ENSLBEG00000015294	-	80	86.000	Labrus_bergylta
ENSMAMG00000019691	-	80	92.228	ENSLACG00000014160	srsf1a	73	92.228	Latimeria_chalumnae
ENSMAMG00000019691	-	81	94.898	ENSLOCG00000005994	srsf1a	79	94.898	Lepisosteus_oculatus
ENSMAMG00000019691	-	81	91.878	ENSLAFG00000025743	SRSF1	79	94.924	Loxodonta_africana
ENSMAMG00000019691	-	100	88.211	ENSMFAG00000040003	-	99	94.444	Macaca_fascicularis
ENSMAMG00000019691	-	100	85.366	ENSMMUG00000003260	-	95	90.306	Macaca_mulatta
ENSMAMG00000019691	-	100	88.211	ENSMMUG00000004725	SRSF1	99	94.444	Macaca_mulatta
ENSMAMG00000019691	-	100	88.211	ENSMNEG00000027680	-	99	94.444	Macaca_nemestrina
ENSMAMG00000019691	-	100	84.959	ENSMNEG00000015983	-	78	91.371	Macaca_nemestrina
ENSMAMG00000019691	-	100	85.714	ENSMLEG00000015243	-	77	89.286	Mandrillus_leucophaeus
ENSMAMG00000019691	-	81	91.878	ENSMLEG00000040509	SRSF1	79	94.924	Mandrillus_leucophaeus
ENSMAMG00000019691	-	100	88.211	ENSMAUG00000021845	Srsf1	79	94.924	Mesocricetus_auratus
ENSMAMG00000019691	-	100	88.211	ENSMICG00000013639	-	99	94.444	Microcebus_murinus
ENSMAMG00000019691	-	100	88.211	ENSMOCG00000001996	Srsf1	79	94.924	Microtus_ochrogaster
ENSMAMG00000019691	-	80	90.625	ENSMMOG00000014354	srsf1a	83	90.625	Mola_mola
ENSMAMG00000019691	-	76	92.973	ENSMODG00000014781	-	63	94.054	Monodelphis_domestica
ENSMAMG00000019691	-	80	91.667	ENSMALG00000017129	-	75	92.188	Monopterus_albus
ENSMAMG00000019691	-	84	80.296	ENSMALG00000007763	-	79	83.163	Monopterus_albus
ENSMAMG00000019691	-	100	88.211	MGP_CAROLIEiJ_G0016943	Srsf1	92	93.478	Mus_caroli
ENSMAMG00000019691	-	100	88.211	ENSMUSG00000018379	Srsf1	92	93.478	Mus_musculus
ENSMAMG00000019691	-	100	88.211	MGP_PahariEiJ_G0018074	Srsf1	86	93.548	Mus_pahari
ENSMAMG00000019691	-	100	88.211	MGP_SPRETEiJ_G0017790	Srsf1	92	93.478	Mus_spretus
ENSMAMG00000019691	-	81	91.878	ENSMPUG00000015369	SRSF1	79	94.924	Mustela_putorius_furo
ENSMAMG00000019691	-	84	86.139	ENSMLUG00000023995	-	79	87.245	Myotis_lucifugus
ENSMAMG00000019691	-	81	91.878	ENSMLUG00000011040	SRSF1	79	94.924	Myotis_lucifugus
ENSMAMG00000019691	-	81	91.878	ENSNGAG00000011395	Srsf1	79	94.924	Nannospalax_galili
ENSMAMG00000019691	-	100	87.967	ENSNBRG00000008041	srsf1b	80	88.776	Neolamprologus_brichardi
ENSMAMG00000019691	-	100	88.211	ENSNLEG00000008088	-	99	94.444	Nomascus_leucogenys
ENSMAMG00000019691	-	52	89.764	ENSMEUG00000002783	-	100	91.339	Notamacropus_eugenii
ENSMAMG00000019691	-	54	90.152	ENSOPRG00000001234	-	72	94.697	Ochotona_princeps
ENSMAMG00000019691	-	99	88.163	ENSODEG00000011481	-	79	94.416	Octodon_degus
ENSMAMG00000019691	-	80	91.667	ENSONIG00000013160	-	77	92.188	Oreochromis_niloticus
ENSMAMG00000019691	-	99	97.490	ENSONIG00000004860	-	98	97.490	Oreochromis_niloticus
ENSMAMG00000019691	-	97	70.954	ENSOCUG00000010894	-	77	71.574	Oryctolagus_cuniculus
ENSMAMG00000019691	-	80	91.667	ENSORLG00000004580	srsf1a	78	92.188	Oryzias_latipes
ENSMAMG00000019691	-	80	91.667	ENSORLG00020009456	srsf1a	83	92.188	Oryzias_latipes_hni
ENSMAMG00000019691	-	80	91.667	ENSORLG00015014384	srsf1a	83	92.188	Oryzias_latipes_hsok
ENSMAMG00000019691	-	73	90.286	ENSOMEG00000004106	srsf1a	71	90.857	Oryzias_melastigma
ENSMAMG00000019691	-	86	92.308	ENSOGAG00000025950	-	79	94.924	Otolemur_garnettii
ENSMAMG00000019691	-	81	89.286	ENSOARG00000008323	SRSF1	78	89.340	Ovis_aries
ENSMAMG00000019691	-	100	88.211	ENSPPAG00000043403	-	99	94.444	Pan_paniscus
ENSMAMG00000019691	-	100	88.211	ENSPPRG00000004238	-	92	93.478	Panthera_pardus
ENSMAMG00000019691	-	100	88.211	ENSPTRG00000049077	SRSF1	99	94.444	Pan_troglodytes
ENSMAMG00000019691	-	100	70.370	ENSPANG00000030275	-	75	68.718	Papio_anubis
ENSMAMG00000019691	-	100	88.211	ENSPANG00000022305	-	99	94.444	Papio_anubis
ENSMAMG00000019691	-	81	95.408	ENSPKIG00000012857	srsf1b	80	95.408	Paramormyrops_kingsleyae
ENSMAMG00000019691	-	80	92.746	ENSPKIG00000007204	srsf1a	83	93.750	Paramormyrops_kingsleyae
ENSMAMG00000019691	-	81	83.920	ENSPSIG00000009000	-	80	86.935	Pelodiscus_sinensis
ENSMAMG00000019691	-	83	86.935	ENSPMGG00000005467	-	77	90.217	Periophthalmus_magnuspinnatus
ENSMAMG00000019691	-	80	90.104	ENSPMGG00000013112	-	82	89.062	Periophthalmus_magnuspinnatus
ENSMAMG00000019691	-	100	88.211	ENSPEMG00000021416	Srsf1	79	94.924	Peromyscus_maniculatus_bairdii
ENSMAMG00000019691	-	81	92.424	ENSPCIG00000006076	-	80	94.949	Phascolarctos_cinereus
ENSMAMG00000019691	-	96	89.270	ENSPFOG00000018325	-	70	90.206	Poecilia_formosa
ENSMAMG00000019691	-	81	89.899	ENSPLAG00000008416	srsf1b	79	90.206	Poecilia_latipinna
ENSMAMG00000019691	-	51	89.344	ENSPMEG00000020607	-	98	89.344	Poecilia_mexicana
ENSMAMG00000019691	-	51	89.344	ENSPMEG00000014312	-	98	89.344	Poecilia_mexicana
ENSMAMG00000019691	-	81	89.899	ENSPMEG00000002388	-	79	90.206	Poecilia_mexicana
ENSMAMG00000019691	-	80	91.667	ENSPREG00000009667	srsf1a	78	92.188	Poecilia_reticulata
ENSMAMG00000019691	-	100	88.211	ENSPPYG00000008240	SRSF1	79	94.924	Pongo_abelii
ENSMAMG00000019691	-	81	91.878	ENSPCAG00000005199	SRSF1	79	94.924	Procavia_capensis
ENSMAMG00000019691	-	82	74.752	ENSPCOG00000025736	-	95	74.372	Propithecus_coquereli
ENSMAMG00000019691	-	100	88.211	ENSPCOG00000023654	-	99	94.444	Propithecus_coquereli
ENSMAMG00000019691	-	56	98.571	ENSPVAG00000000519	-	54	98.571	Pteropus_vampyrus
ENSMAMG00000019691	-	95	89.270	ENSPNAG00000022241	srsf1a	78	94.301	Pygocentrus_nattereri
ENSMAMG00000019691	-	81	92.347	ENSPNAG00000014601	srsf1b	80	92.347	Pygocentrus_nattereri
ENSMAMG00000019691	-	81	91.878	ENSRNOG00000050323	Srsf1	79	94.924	Rattus_norvegicus
ENSMAMG00000019691	-	100	88.211	ENSRBIG00000034445	-	99	94.444	Rhinopithecus_bieti
ENSMAMG00000019691	-	100	88.211	ENSRROG00000041506	-	99	94.444	Rhinopithecus_roxellana
ENSMAMG00000019691	-	100	88.211	ENSSBOG00000025377	-	99	94.444	Saimiri_boliviensis_boliviensis
ENSMAMG00000019691	-	81	92.424	ENSSHAG00000002552	-	80	94.949	Sarcophilus_harrisii
ENSMAMG00000019691	-	81	94.359	ENSSFOG00015004800	srsf1a	79	94.359	Scleropages_formosus
ENSMAMG00000019691	-	80	90.104	ENSSMAG00000007018	-	78	90.625	Scophthalmus_maximus
ENSMAMG00000019691	-	81	88.235	ENSSMAG00000009719	-	80	88.235	Scophthalmus_maximus
ENSMAMG00000019691	-	80	90.625	ENSSDUG00000011303	-	83	91.146	Seriola_dumerili
ENSMAMG00000019691	-	100	80.816	ENSSDUG00000003929	-	84	88.000	Seriola_dumerili
ENSMAMG00000019691	-	80	90.625	ENSSLDG00000010543	-	78	91.146	Seriola_lalandi_dorsalis
ENSMAMG00000019691	-	95	81.818	ENSSLDG00000016895	-	78	90.323	Seriola_lalandi_dorsalis
ENSMAMG00000019691	-	81	80.203	ENSSLDG00000016868	-	78	83.249	Seriola_lalandi_dorsalis
ENSMAMG00000019691	-	76	91.848	ENSSARG00000010949	-	63	93.478	Sorex_araneus
ENSMAMG00000019691	-	100	87.805	ENSSPUG00000000804	-	93	92.935	Sphenodon_punctatus
ENSMAMG00000019691	-	81	89.474	ENSSPAG00000014152	-	81	88.995	Stegastes_partitus
ENSMAMG00000019691	-	80	92.708	ENSSPAG00000022562	-	78	92.708	Stegastes_partitus
ENSMAMG00000019691	-	100	88.211	ENSSSCG00000017626	-	79	94.924	Sus_scrofa
ENSMAMG00000019691	-	55	89.474	ENSTGUG00000008416	-	72	93.985	Taeniopygia_guttata
ENSMAMG00000019691	-	80	90.625	ENSTRUG00000003691	srsf1a	78	91.146	Takifugu_rubripes
ENSMAMG00000019691	-	80	90.625	ENSTNIG00000016223	srsf1a	77	91.146	Tetraodon_nigroviridis
ENSMAMG00000019691	-	76	90.217	ENSTBEG00000015378	-	63	92.935	Tupaia_belangeri
ENSMAMG00000019691	-	54	90.152	ENSTTRG00000007310	SRSF1	72	94.697	Tursiops_truncatus
ENSMAMG00000019691	-	81	91.878	ENSUAMG00000009858	SRSF1	79	94.924	Ursus_americanus
ENSMAMG00000019691	-	100	88.211	ENSUMAG00000000455	-	78	94.924	Ursus_maritimus
ENSMAMG00000019691	-	81	91.371	ENSVPAG00000010094	SRSF1	79	94.416	Vicugna_pacos
ENSMAMG00000019691	-	100	88.211	ENSVVUG00000011882	-	78	94.924	Vulpes_vulpes
ENSMAMG00000019691	-	81	90.306	ENSXETG00000008954	srsf1	81	86.111	Xenopus_tropicalis
ENSMAMG00000019691	-	80	91.667	ENSXMAG00000011766	srsf1a	78	92.188	Xiphophorus_maculatus