EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000019725 (Gene tree)
Gene ID: 113137103
Gene Symbol: rnaseh1
Alias: zgc:91971
Full Name: ribonuclease H1
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 3760 bases
Position: chrOOHQ01000069.1:20729018-20732777
Accession: 113137103
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000029283	RNase_H	PF00075.24	6.2e-43	1	1
ENSMAMP00000029277	RNase_H	PF00075.24	7.4e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000030028	-	1392	XM_026318514	ENSMAMP00000029277	305 (aa)	XP_026174299	UPI000E45A555
ENSMAMT00000030034	-	1227	-	ENSMAMP00000029283	284 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000019725's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000019725's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000019725	rnaseh1	94	58.364	ENSG00000171865	RNASEH1	90	58.364	Homo_sapiens
ENSMAMG00000019725	rnaseh1	98	79.496	ENSAPOG00000000412	rnaseh1	99	78.930	Acanthochromis_polyacanthus
ENSMAMG00000019725	rnaseh1	94	56.929	ENSAMEG00000018433	RNASEH1	99	53.741	Ailuropoda_melanoleuca
ENSMAMG00000019725	rnaseh1	99	79.715	ENSACIG00000014666	rnaseh1	99	78.146	Amphilophus_citrinellus
ENSMAMG00000019725	rnaseh1	98	82.014	ENSAOCG00000015210	rnaseh1	99	81.271	Amphiprion_ocellaris
ENSMAMG00000019725	rnaseh1	98	82.374	ENSAPEG00000014104	rnaseh1	99	80.936	Amphiprion_percula
ENSMAMG00000019725	rnaseh1	99	81.272	ENSATEG00000000598	rnaseh1	100	81.272	Anabas_testudineus
ENSMAMG00000019725	rnaseh1	89	55.224	ENSAPLG00000001961	RNASEH1	100	55.224	Anas_platyrhynchos
ENSMAMG00000019725	rnaseh1	94	49.153	ENSACAG00000016857	rnaseh1	91	49.153	Anolis_carolinensis
ENSMAMG00000019725	rnaseh1	94	58.955	ENSANAG00000024055	RNASEH1	90	58.955	Aotus_nancymaae
ENSMAMG00000019725	rnaseh1	99	78.671	ENSACLG00000006741	rnaseh1	99	78.827	Astatotilapia_calliptera
ENSMAMG00000019725	rnaseh1	94	58.242	ENSAMXG00000042940	rnaseh1	97	58.242	Astyanax_mexicanus
ENSMAMG00000019725	rnaseh1	94	58.955	ENSBTAG00000016235	RNASEH1	91	58.955	Bos_taurus
ENSMAMG00000019725	rnaseh1	95	40.149	WBGene00004382	rnh-1.0	97	40.149	Caenorhabditis_elegans
ENSMAMG00000019725	rnaseh1	94	56.827	ENSCJAG00000035450	RNASEH1	90	56.827	Callithrix_jacchus
ENSMAMG00000019725	rnaseh1	96	54.515	ENSCAFG00000003259	RNASEH1	99	54.515	Canis_familiaris
ENSMAMG00000019725	rnaseh1	53	69.536	ENSCAFG00020004994	RNASEH1	97	69.536	Canis_lupus_dingo
ENSMAMG00000019725	rnaseh1	94	57.836	ENSCHIG00000022264	-	99	55.254	Capra_hircus
ENSMAMG00000019725	rnaseh1	86	46.614	ENSCHIG00000022230	-	99	46.614	Capra_hircus
ENSMAMG00000019725	rnaseh1	93	56.015	ENSTSYG00000012926	RNASEH1	89	56.015	Carlito_syrichta
ENSMAMG00000019725	rnaseh1	88	56.746	ENSCAPG00000004813	RNASEH1	99	56.746	Cavia_aperea
ENSMAMG00000019725	rnaseh1	94	56.506	ENSCPOG00000022278	Rnaseh1	87	56.506	Cavia_porcellus
ENSMAMG00000019725	rnaseh1	94	57.934	ENSCCAG00000038017	RNASEH1	90	57.934	Cebus_capucinus
ENSMAMG00000019725	rnaseh1	94	51.504	ENSCATG00000016818	-	89	51.504	Cercocebus_atys
ENSMAMG00000019725	rnaseh1	94	57.303	ENSCATG00000016515	-	90	57.303	Cercocebus_atys
ENSMAMG00000019725	rnaseh1	94	55.970	ENSCLAG00000002440	RNASEH1	90	55.970	Chinchilla_lanigera
ENSMAMG00000019725	rnaseh1	94	57.621	ENSCSAG00000006943	RNASEH1	90	57.621	Chlorocebus_sabaeus
ENSMAMG00000019725	rnaseh1	62	64.000	ENSCHOG00000008547	RNASEH1	86	64.000	Choloepus_hoffmanni
ENSMAMG00000019725	rnaseh1	94	56.777	ENSCPBG00000021620	RNASEH1	99	56.777	Chrysemys_picta_bellii
ENSMAMG00000019725	rnaseh1	94	36.101	ENSCING00000014054	-	93	36.101	Ciona_intestinalis
ENSMAMG00000019725	rnaseh1	79	36.481	ENSCSAVG00000000009	-	96	36.481	Ciona_savignyi
ENSMAMG00000019725	rnaseh1	94	58.052	ENSCANG00000037763	RNASEH1	90	58.052	Colobus_angolensis_palliatus
ENSMAMG00000019725	rnaseh1	94	55.431	ENSCGRG00001008950	Rnaseh1	93	56.140	Cricetulus_griseus_chok1gshd
ENSMAMG00000019725	rnaseh1	94	55.431	ENSCGRG00000006029	Rnaseh1	93	56.140	Cricetulus_griseus_crigri
ENSMAMG00000019725	rnaseh1	99	69.310	ENSCSEG00000005741	rnaseh1	98	69.872	Cynoglossus_semilaevis
ENSMAMG00000019725	rnaseh1	98	74.729	ENSCVAG00000018717	rnaseh1	99	71.429	Cyprinodon_variegatus
ENSMAMG00000019725	rnaseh1	95	66.667	ENSDARG00000042571	rnaseh1	98	66.667	Danio_rerio
ENSMAMG00000019725	rnaseh1	94	56.929	ENSDNOG00000016056	RNASEH1	90	56.929	Dasypus_novemcinctus
ENSMAMG00000019725	rnaseh1	94	56.391	ENSDORG00000000704	Rnaseh1	90	56.391	Dipodomys_ordii
ENSMAMG00000019725	rnaseh1	93	37.864	FBgn0023171	rnh1	93	37.864	Drosophila_melanogaster
ENSMAMG00000019725	rnaseh1	93	54.717	ENSETEG00000012674	RNASEH1	89	54.717	Echinops_telfairi
ENSMAMG00000019725	rnaseh1	94	46.048	ENSEBUG00000008898	rnaseh1	99	46.048	Eptatretus_burgeri
ENSMAMG00000019725	rnaseh1	95	43.956	ENSEBUG00000006116	rnaseh1	79	43.956	Eptatretus_burgeri
ENSMAMG00000019725	rnaseh1	94	57.836	ENSEASG00005022200	RNASEH1	97	54.915	Equus_asinus_asinus
ENSMAMG00000019725	rnaseh1	94	57.836	ENSECAG00000020695	RNASEH1	97	54.915	Equus_caballus
ENSMAMG00000019725	rnaseh1	95	69.065	ENSELUG00000010112	rnaseh1	99	67.224	Esox_lucius
ENSMAMG00000019725	rnaseh1	94	57.836	ENSFCAG00000025832	RNASEH1	99	55.705	Felis_catus
ENSMAMG00000019725	rnaseh1	95	56.835	ENSFALG00000002069	RNASEH1	93	57.194	Ficedula_albicollis
ENSMAMG00000019725	rnaseh1	94	56.180	ENSFDAG00000002035	RNASEH1	79	56.180	Fukomys_damarensis
ENSMAMG00000019725	rnaseh1	95	72.059	ENSGMOG00000013818	rnaseh1	99	70.748	Gadus_morhua
ENSMAMG00000019725	rnaseh1	94	56.204	ENSGALG00000016389	RNASEH1	93	56.204	Gallus_gallus
ENSMAMG00000019725	rnaseh1	95	71.324	ENSGAFG00000001776	rnaseh1	100	67.905	Gambusia_affinis
ENSMAMG00000019725	rnaseh1	95	78.598	ENSGACG00000011935	rnaseh1	98	76.871	Gasterosteus_aculeatus
ENSMAMG00000019725	rnaseh1	94	57.348	ENSGAGG00000009150	RNASEH1	61	58.759	Gopherus_agassizii
ENSMAMG00000019725	rnaseh1	94	58.052	ENSGGOG00000034822	RNASEH1	90	58.052	Gorilla_gorilla
ENSMAMG00000019725	rnaseh1	99	78.671	ENSHBUG00000004666	rnaseh1	99	78.827	Haplochromis_burtoni
ENSMAMG00000019725	rnaseh1	94	55.224	ENSHGLG00000002585	Rnaseh1	83	55.224	Heterocephalus_glaber_female
ENSMAMG00000019725	rnaseh1	94	55.224	ENSHGLG00100005105	Rnaseh1	83	55.224	Heterocephalus_glaber_male
ENSMAMG00000019725	rnaseh1	96	72.857	ENSHCOG00000012329	rnaseh1	99	70.395	Hippocampus_comes
ENSMAMG00000019725	rnaseh1	95	61.852	ENSIPUG00000023060	rnaseh1	98	61.852	Ictalurus_punctatus
ENSMAMG00000019725	rnaseh1	94	58.271	ENSSTOG00000012774	RNASEH1	91	58.271	Ictidomys_tridecemlineatus
ENSMAMG00000019725	rnaseh1	91	44.961	ENSJJAG00000008994	-	88	44.961	Jaculus_jaculus
ENSMAMG00000019725	rnaseh1	93	51.136	ENSJJAG00000021481	-	89	51.136	Jaculus_jaculus
ENSMAMG00000019725	rnaseh1	85	53.527	ENSJJAG00000020238	Rnaseh1	90	53.527	Jaculus_jaculus
ENSMAMG00000019725	rnaseh1	98	76.534	ENSKMAG00000001373	rnaseh1	98	73.898	Kryptolebias_marmoratus
ENSMAMG00000019725	rnaseh1	100	73.443	ENSLBEG00000004480	rnaseh1	97	77.941	Labrus_bergylta
ENSMAMG00000019725	rnaseh1	95	56.272	ENSLACG00000007100	RNASEH1	95	55.782	Latimeria_chalumnae
ENSMAMG00000019725	rnaseh1	96	63.701	ENSLOCG00000017212	rnaseh1	100	63.475	Lepisosteus_oculatus
ENSMAMG00000019725	rnaseh1	94	58.427	ENSLAFG00000015091	RNASEH1	90	58.427	Loxodonta_africana
ENSMAMG00000019725	rnaseh1	94	51.449	ENSMFAG00000002323	-	90	51.449	Macaca_fascicularis
ENSMAMG00000019725	rnaseh1	94	57.678	ENSMFAG00000000063	-	90	57.678	Macaca_fascicularis
ENSMAMG00000019725	rnaseh1	94	51.449	ENSMMUG00000019280	-	90	51.449	Macaca_mulatta
ENSMAMG00000019725	rnaseh1	94	51.087	ENSMNEG00000029676	-	90	51.087	Macaca_nemestrina
ENSMAMG00000019725	rnaseh1	94	57.678	ENSMNEG00000040183	-	90	57.678	Macaca_nemestrina
ENSMAMG00000019725	rnaseh1	94	52.536	ENSMLEG00000028662	-	90	52.536	Mandrillus_leucophaeus
ENSMAMG00000019725	rnaseh1	88	58.000	ENSMLEG00000039352	-	99	58.000	Mandrillus_leucophaeus
ENSMAMG00000019725	rnaseh1	99	78.671	ENSMZEG00005013006	rnaseh1	99	78.827	Maylandia_zebra
ENSMAMG00000019725	rnaseh1	84	55.556	ENSMGAG00000013979	RNASEH1	99	55.556	Meleagris_gallopavo
ENSMAMG00000019725	rnaseh1	94	55.926	ENSMAUG00000014957	Rnaseh1	93	53.497	Mesocricetus_auratus
ENSMAMG00000019725	rnaseh1	94	58.364	ENSMICG00000033156	RNASEH1	89	58.364	Microcebus_murinus
ENSMAMG00000019725	rnaseh1	94	56.985	ENSMOCG00000015522	Rnaseh1	93	54.861	Microtus_ochrogaster
ENSMAMG00000019725	rnaseh1	99	73.776	ENSMMOG00000015902	rnaseh1	99	72.638	Mola_mola
ENSMAMG00000019725	rnaseh1	82	53.419	ENSMODG00000028814	-	91	52.941	Monodelphis_domestica
ENSMAMG00000019725	rnaseh1	93	57.197	ENSMODG00000014491	-	88	57.197	Monodelphis_domestica
ENSMAMG00000019725	rnaseh1	98	82.374	ENSMALG00000010565	rnaseh1	99	79.667	Monopterus_albus
ENSMAMG00000019725	rnaseh1	94	57.519	MGP_CAROLIEiJ_G0017660	Rnaseh1	97	55.245	Mus_caroli
ENSMAMG00000019725	rnaseh1	94	57.895	ENSMUSG00000020630	Rnaseh1	97	55.594	Mus_musculus
ENSMAMG00000019725	rnaseh1	94	55.639	MGP_PahariEiJ_G0029418	Rnaseh1	97	55.709	Mus_pahari
ENSMAMG00000019725	rnaseh1	94	57.519	MGP_SPRETEiJ_G0018502	Rnaseh1	97	55.245	Mus_spretus
ENSMAMG00000019725	rnaseh1	52	70.470	ENSMPUG00000012984	RNASEH1	72	70.470	Mustela_putorius_furo
ENSMAMG00000019725	rnaseh1	94	57.519	ENSNGAG00000015966	Rnaseh1	85	57.519	Nannospalax_galili
ENSMAMG00000019725	rnaseh1	99	78.671	ENSNBRG00000008739	rnaseh1	99	78.827	Neolamprologus_brichardi
ENSMAMG00000019725	rnaseh1	94	51.673	ENSNLEG00000015400	RNASEH1	88	51.673	Nomascus_leucogenys
ENSMAMG00000019725	rnaseh1	86	51.020	ENSNLEG00000000059	-	88	51.020	Nomascus_leucogenys
ENSMAMG00000019725	rnaseh1	93	37.643	ENSMEUG00000003610	-	89	37.643	Notamacropus_eugenii
ENSMAMG00000019725	rnaseh1	94	55.805	ENSOPRG00000005072	RNASEH1	90	55.805	Ochotona_princeps
ENSMAMG00000019725	rnaseh1	95	57.353	ENSODEG00000000235	Rnaseh1	95	54.795	Octodon_degus
ENSMAMG00000019725	rnaseh1	96	81.004	ENSONIG00000018697	rnaseh1	100	81.004	Oreochromis_niloticus
ENSMAMG00000019725	rnaseh1	94	57.090	ENSOCUG00000006117	RNASEH1	90	57.090	Oryctolagus_cuniculus
ENSMAMG00000019725	rnaseh1	98	75.540	ENSORLG00000018127	rnaseh1	99	75.899	Oryzias_latipes
ENSMAMG00000019725	rnaseh1	99	75.177	ENSORLG00020013660	rnaseh1	99	73.026	Oryzias_latipes_hni
ENSMAMG00000019725	rnaseh1	99	75.177	ENSORLG00015011338	rnaseh1	99	73.026	Oryzias_latipes_hsok
ENSMAMG00000019725	rnaseh1	87	74.597	ENSOMEG00000004710	rnaseh1	99	72.491	Oryzias_melastigma
ENSMAMG00000019725	rnaseh1	94	56.410	ENSOGAG00000017176	RNASEH1	90	56.410	Otolemur_garnettii
ENSMAMG00000019725	rnaseh1	96	49.835	ENSOARG00000005386	RNASEH1	99	49.835	Ovis_aries
ENSMAMG00000019725	rnaseh1	94	58.364	ENSPPAG00000034221	RNASEH1	90	58.364	Pan_paniscus
ENSMAMG00000019725	rnaseh1	94	57.463	ENSPPRG00000015513	RNASEH1	99	55.369	Panthera_pardus
ENSMAMG00000019725	rnaseh1	87	58.000	ENSPTIG00000019034	RNASEH1	83	58.000	Panthera_tigris_altaica
ENSMAMG00000019725	rnaseh1	86	51.779	ENSPTRG00000043403	-	91	51.779	Pan_troglodytes
ENSMAMG00000019725	rnaseh1	94	58.364	ENSPTRG00000011614	RNASEH1	90	58.364	Pan_troglodytes
ENSMAMG00000019725	rnaseh1	94	50.362	ENSPANG00000018246	-	89	50.362	Papio_anubis
ENSMAMG00000019725	rnaseh1	94	57.678	ENSPANG00000000443	RNASEH1	98	57.769	Papio_anubis
ENSMAMG00000019725	rnaseh1	95	60.650	ENSPKIG00000003146	rnaseh1	99	61.733	Paramormyrops_kingsleyae
ENSMAMG00000019725	rnaseh1	94	54.779	ENSPSIG00000002937	RNASEH1	99	54.779	Pelodiscus_sinensis
ENSMAMG00000019725	rnaseh1	95	66.914	ENSPMGG00000017463	rnaseh1	99	65.517	Periophthalmus_magnuspinnatus
ENSMAMG00000019725	rnaseh1	94	56.554	ENSPEMG00000022465	-	93	54.930	Peromyscus_maniculatus_bairdii
ENSMAMG00000019725	rnaseh1	57	39.264	ENSPCIG00000026047	-	90	40.000	Phascolarctos_cinereus
ENSMAMG00000019725	rnaseh1	93	55.094	ENSPCIG00000023334	-	88	55.094	Phascolarctos_cinereus
ENSMAMG00000019725	rnaseh1	96	73.162	ENSPFOG00000002841	rnaseh1	100	69.595	Poecilia_formosa
ENSMAMG00000019725	rnaseh1	61	67.816	ENSPLAG00000021349	-	77	63.131	Poecilia_latipinna
ENSMAMG00000019725	rnaseh1	96	73.162	ENSPMEG00000016826	rnaseh1	100	69.595	Poecilia_mexicana
ENSMAMG00000019725	rnaseh1	96	72.302	ENSPREG00000012197	rnaseh1	100	68.874	Poecilia_reticulata
ENSMAMG00000019725	rnaseh1	94	48.148	ENSPPYG00000025873	RNASEH1	88	48.148	Pongo_abelii
ENSMAMG00000019725	rnaseh1	86	53.846	ENSPPYG00000008067	-	90	53.846	Pongo_abelii
ENSMAMG00000019725	rnaseh1	94	55.597	ENSPCAG00000002500	RNASEH1	90	55.597	Procavia_capensis
ENSMAMG00000019725	rnaseh1	93	50.943	ENSPCOG00000019444	RNASEH1	88	50.943	Propithecus_coquereli
ENSMAMG00000019725	rnaseh1	94	52.985	ENSPVAG00000002070	RNASEH1	99	50.667	Pteropus_vampyrus
ENSMAMG00000019725	rnaseh1	99	77.622	ENSPNYG00000001292	rnaseh1	99	77.850	Pundamilia_nyererei
ENSMAMG00000019725	rnaseh1	95	65.343	ENSPNAG00000022344	rnaseh1	99	62.791	Pygocentrus_nattereri
ENSMAMG00000019725	rnaseh1	94	56.929	ENSRNOG00000008584	Rnaseh1	93	56.140	Rattus_norvegicus
ENSMAMG00000019725	rnaseh1	94	58.052	ENSRBIG00000034222	RNASEH1	89	58.052	Rhinopithecus_bieti
ENSMAMG00000019725	rnaseh1	94	58.052	ENSRROG00000041761	RNASEH1	89	58.052	Rhinopithecus_roxellana
ENSMAMG00000019725	rnaseh1	95	52.000	YMR234W	-	87	52.000	Saccharomyces_cerevisiae
ENSMAMG00000019725	rnaseh1	94	57.565	ENSSBOG00000025411	RNASEH1	90	57.565	Saimiri_boliviensis_boliviensis
ENSMAMG00000019725	rnaseh1	94	57.090	ENSSHAG00000013051	RNASEH1	97	53.559	Sarcophilus_harrisii
ENSMAMG00000019725	rnaseh1	96	62.319	ENSSFOG00015002709	rnaseh1	100	59.933	Scleropages_formosus
ENSMAMG00000019725	rnaseh1	99	80.071	ENSSMAG00000007586	rnaseh1	99	79.538	Scophthalmus_maximus
ENSMAMG00000019725	rnaseh1	100	82.042	ENSSDUG00000008217	rnaseh1	100	82.042	Seriola_dumerili
ENSMAMG00000019725	rnaseh1	90	80.784	ENSSLDG00000000442	rnaseh1	95	81.496	Seriola_lalandi_dorsalis
ENSMAMG00000019725	rnaseh1	95	53.047	ENSSPUG00000006644	RNASEH1	93	53.047	Sphenodon_punctatus
ENSMAMG00000019725	rnaseh1	98	82.437	ENSSPAG00000009353	rnaseh1	99	81.667	Stegastes_partitus
ENSMAMG00000019725	rnaseh1	94	57.463	ENSSSCG00000025305	RNASEH1	99	54.362	Sus_scrofa
ENSMAMG00000019725	rnaseh1	94	55.072	ENSTGUG00000012980	RNASEH1	92	55.435	Taeniopygia_guttata
ENSMAMG00000019725	rnaseh1	98	71.480	ENSTRUG00000015774	rnaseh1	99	71.480	Takifugu_rubripes
ENSMAMG00000019725	rnaseh1	97	75.362	ENSTNIG00000010715	rnaseh1	99	75.362	Tetraodon_nigroviridis
ENSMAMG00000019725	rnaseh1	94	55.019	ENSTTRG00000001615	RNASEH1	99	51.689	Tursiops_truncatus
ENSMAMG00000019725	rnaseh1	53	69.536	ENSUAMG00000018254	RNASEH1	78	69.536	Ursus_americanus
ENSMAMG00000019725	rnaseh1	73	56.039	ENSUMAG00000003941	RNASEH1	65	56.039	Ursus_maritimus
ENSMAMG00000019725	rnaseh1	96	46.980	ENSVPAG00000011589	RNASEH1	99	46.980	Vicugna_pacos
ENSMAMG00000019725	rnaseh1	96	54.392	ENSVVUG00000008633	RNASEH1	89	54.392	Vulpes_vulpes
ENSMAMG00000019725	rnaseh1	93	57.678	ENSXETG00000001212	rnaseh1	99	54.762	Xenopus_tropicalis
ENSMAMG00000019725	rnaseh1	92	39.313	ENSXETG00000030371	-	98	39.313	Xenopus_tropicalis
ENSMAMG00000019725	rnaseh1	95	73.801	ENSXMAG00000002357	rnaseh1	99	70.508	Xiphophorus_maculatus