EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000019773 (Gene tree)
Gene ID: 113140265
Gene Symbol: tsen54
Alias: zgc:109927
Full Name: tRNA splicing endonuclease subunit 54
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 6147 bases
Position: chrOOHQ01000092.1:7364528-7370674
Accession: 113140265
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000029347	tRNA_int_end_N2	PF12928.7	6.1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000030106	-	2115	-	ENSMAMP00000029347	506 (aa)	XP_026179851	UPI000E4633D0

Gene Model

Click here to download ENSMAMG00000019773's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000019773's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000019773	tsen54	98	44.571	ENSG00000182173	TSEN54	100	62.500	Homo_sapiens
ENSMAMG00000019773	tsen54	100	78.571	ENSAPOG00000009659	tsen54	98	79.344	Acanthochromis_polyacanthus
ENSMAMG00000019773	tsen54	98	43.071	ENSAMEG00000009414	TSEN54	99	43.333	Ailuropoda_melanoleuca
ENSMAMG00000019773	tsen54	100	79.537	ENSAOCG00000000152	tsen54	98	79.537	Amphiprion_ocellaris
ENSMAMG00000019773	tsen54	100	78.378	ENSAPEG00000018931	tsen54	98	78.958	Amphiprion_percula
ENSMAMG00000019773	tsen54	100	77.170	ENSATEG00000019860	tsen54	100	75.849	Anabas_testudineus
ENSMAMG00000019773	tsen54	86	46.460	ENSAPLG00000009419	TSEN54	99	46.460	Anas_platyrhynchos
ENSMAMG00000019773	tsen54	97	46.935	ENSACAG00000006714	TSEN54	98	47.674	Anolis_carolinensis
ENSMAMG00000019773	tsen54	98	43.762	ENSANAG00000024061	TSEN54	97	44.146	Aotus_nancymaae
ENSMAMG00000019773	tsen54	100	74.427	ENSACLG00000019800	tsen54	100	74.427	Astatotilapia_calliptera
ENSMAMG00000019773	tsen54	97	60.120	ENSAMXG00000006546	tsen54	97	59.920	Astyanax_mexicanus
ENSMAMG00000019773	tsen54	98	43.954	ENSCJAG00000014278	TSEN54	97	44.530	Callithrix_jacchus
ENSMAMG00000019773	tsen54	98	42.857	ENSCAFG00000004798	TSEN54	98	43.977	Canis_familiaris
ENSMAMG00000019773	tsen54	98	42.857	ENSCAFG00020000312	TSEN54	98	43.977	Canis_lupus_dingo
ENSMAMG00000019773	tsen54	98	43.378	ENSCHIG00000019908	TSEN54	98	43.750	Capra_hircus
ENSMAMG00000019773	tsen54	86	40.725	ENSTSYG00000037439	TSEN54	99	42.208	Carlito_syrichta
ENSMAMG00000019773	tsen54	98	45.229	ENSCCAG00000036624	TSEN54	97	43.954	Cebus_capucinus
ENSMAMG00000019773	tsen54	97	45.279	ENSCATG00000042877	TSEN54	97	44.762	Cercocebus_atys
ENSMAMG00000019773	tsen54	97	44.023	ENSCLAG00000002924	TSEN54	96	44.168	Chinchilla_lanigera
ENSMAMG00000019773	tsen54	98	43.786	ENSCSAG00000004809	TSEN54	98	44.952	Chlorocebus_sabaeus
ENSMAMG00000019773	tsen54	97	46.628	ENSCPBG00000028071	TSEN54	98	46.628	Chrysemys_picta_bellii
ENSMAMG00000019773	tsen54	98	44.952	ENSCANG00000028053	TSEN54	98	44.762	Colobus_angolensis_palliatus
ENSMAMG00000019773	tsen54	98	44.146	ENSCGRG00001020029	Tsen54	98	44.275	Cricetulus_griseus_chok1gshd
ENSMAMG00000019773	tsen54	84	42.634	ENSCGRG00000016289	Tsen54	99	42.794	Cricetulus_griseus_crigri
ENSMAMG00000019773	tsen54	80	60.723	ENSCSEG00000020586	tsen54	99	60.241	Cynoglossus_semilaevis
ENSMAMG00000019773	tsen54	80	57.794	ENSDARG00000036844	tsen54	100	58.273	Danio_rerio
ENSMAMG00000019773	tsen54	97	44.101	ENSDORG00000004073	Tsen54	97	43.561	Dipodomys_ordii
ENSMAMG00000019773	tsen54	75	43.114	ENSEBUG00000005203	TSEN54	71	43.114	Eptatretus_burgeri
ENSMAMG00000019773	tsen54	98	44.068	ENSEASG00005000579	TSEN54	98	44.318	Equus_asinus_asinus
ENSMAMG00000019773	tsen54	98	44.068	ENSECAG00000004924	TSEN54	98	44.318	Equus_caballus
ENSMAMG00000019773	tsen54	86	42.489	ENSEEUG00000008467	TSEN54	99	42.516	Erinaceus_europaeus
ENSMAMG00000019773	tsen54	99	60.708	ENSELUG00000017703	tsen54	92	59.740	Esox_lucius
ENSMAMG00000019773	tsen54	98	43.810	ENSFCAG00000023712	TSEN54	98	44.972	Felis_catus
ENSMAMG00000019773	tsen54	93	47.035	ENSFALG00000001119	TSEN54	92	45.791	Ficedula_albicollis
ENSMAMG00000019773	tsen54	86	43.497	ENSFDAG00000019090	TSEN54	99	42.949	Fukomys_damarensis
ENSMAMG00000019773	tsen54	100	69.844	ENSFHEG00000005470	tsen54	100	69.455	Fundulus_heteroclitus
ENSMAMG00000019773	tsen54	82	56.842	ENSGMOG00000013146	tsen54	96	58.011	Gadus_morhua
ENSMAMG00000019773	tsen54	93	44.266	ENSGALG00000047163	TSEN54	96	43.117	Gallus_gallus
ENSMAMG00000019773	tsen54	100	69.804	ENSGAFG00000005111	tsen54	100	69.804	Gambusia_affinis
ENSMAMG00000019773	tsen54	97	67.475	ENSGACG00000014987	tsen54	100	67.273	Gasterosteus_aculeatus
ENSMAMG00000019773	tsen54	97	46.935	ENSGAGG00000006825	TSEN54	96	46.899	Gopherus_agassizii
ENSMAMG00000019773	tsen54	96	44.681	ENSGGOG00000009417	TSEN54	99	45.261	Gorilla_gorilla
ENSMAMG00000019773	tsen54	90	73.418	ENSHBUG00000018296	tsen54	92	73.418	Haplochromis_burtoni
ENSMAMG00000019773	tsen54	97	44.106	ENSHGLG00000007979	TSEN54	97	43.536	Heterocephalus_glaber_female
ENSMAMG00000019773	tsen54	97	43.156	ENSHGLG00100005497	TSEN54	97	42.586	Heterocephalus_glaber_male
ENSMAMG00000019773	tsen54	81	65.301	ENSHCOG00000007481	tsen54	100	65.301	Hippocampus_comes
ENSMAMG00000019773	tsen54	97	53.984	ENSIPUG00000000590	tsen54	97	53.984	Ictalurus_punctatus
ENSMAMG00000019773	tsen54	98	43.289	ENSSTOG00000012883	TSEN54	98	42.226	Ictidomys_tridecemlineatus
ENSMAMG00000019773	tsen54	98	46.768	ENSJJAG00000007365	Tsen54	98	44.656	Jaculus_jaculus
ENSMAMG00000019773	tsen54	100	69.070	ENSKMAG00000006944	tsen54	100	68.620	Kryptolebias_marmoratus
ENSMAMG00000019773	tsen54	100	71.429	ENSLBEG00000004199	tsen54	100	71.042	Labrus_bergylta
ENSMAMG00000019773	tsen54	97	44.444	ENSLACG00000009497	TSEN54	99	44.444	Latimeria_chalumnae
ENSMAMG00000019773	tsen54	97	55.684	ENSLOCG00000011191	tsen54	97	56.069	Lepisosteus_oculatus
ENSMAMG00000019773	tsen54	92	43.086	ENSLAFG00000011655	TSEN54	92	43.513	Loxodonta_africana
ENSMAMG00000019773	tsen54	98	43.436	ENSMFAG00000000712	TSEN54	98	44.952	Macaca_fascicularis
ENSMAMG00000019773	tsen54	98	43.436	ENSMNEG00000029199	TSEN54	98	44.952	Macaca_nemestrina
ENSMAMG00000019773	tsen54	86	42.796	ENSMLEG00000044168	TSEN54	88	43.818	Mandrillus_leucophaeus
ENSMAMG00000019773	tsen54	100	74.046	ENSMZEG00005000884	tsen54	100	74.046	Maylandia_zebra
ENSMAMG00000019773	tsen54	93	42.857	ENSMGAG00000009556	TSEN54	92	44.332	Meleagris_gallopavo
ENSMAMG00000019773	tsen54	99	44.234	ENSMAUG00000016838	Tsen54	99	44.173	Mesocricetus_auratus
ENSMAMG00000019773	tsen54	98	43.750	ENSMICG00000044012	TSEN54	98	44.961	Microcebus_murinus
ENSMAMG00000019773	tsen54	99	44.318	ENSMOCG00000021585	Tsen54	99	44.318	Microtus_ochrogaster
ENSMAMG00000019773	tsen54	96	64.800	ENSMMOG00000020189	tsen54	99	65.800	Mola_mola
ENSMAMG00000019773	tsen54	97	43.619	ENSMODG00000007438	TSEN54	95	44.571	Monodelphis_domestica
ENSMAMG00000019773	tsen54	99	77.500	ENSMALG00000020573	tsen54	99	78.077	Monopterus_albus
ENSMAMG00000019773	tsen54	97	44.275	MGP_CAROLIEiJ_G0017417	Tsen54	98	43.264	Mus_caroli
ENSMAMG00000019773	tsen54	97	44.867	ENSMUSG00000020781	Tsen54	97	44.146	Mus_musculus
ENSMAMG00000019773	tsen54	98	44.981	MGP_PahariEiJ_G0018547	Tsen54	98	44.742	Mus_pahari
ENSMAMG00000019773	tsen54	98	44.595	MGP_SPRETEiJ_G0018262	Tsen54	98	44.168	Mus_spretus
ENSMAMG00000019773	tsen54	98	41.524	ENSMPUG00000013870	TSEN54	98	43.021	Mustela_putorius_furo
ENSMAMG00000019773	tsen54	99	41.267	ENSMLUG00000015298	TSEN54	99	43.378	Myotis_lucifugus
ENSMAMG00000019773	tsen54	98	45.057	ENSNGAG00000015673	Tsen54	98	44.045	Nannospalax_galili
ENSMAMG00000019773	tsen54	88	41.139	ENSMEUG00000011908	TSEN54	99	40.381	Notamacropus_eugenii
ENSMAMG00000019773	tsen54	98	41.440	ENSOPRG00000012513	TSEN54	97	40.927	Ochotona_princeps
ENSMAMG00000019773	tsen54	100	74.286	ENSONIG00000009543	tsen54	100	74.286	Oreochromis_niloticus
ENSMAMG00000019773	tsen54	100	63.086	ENSORLG00000000852	tsen54	100	63.086	Oryzias_latipes
ENSMAMG00000019773	tsen54	100	63.086	ENSORLG00020018221	tsen54	100	63.386	Oryzias_latipes_hni
ENSMAMG00000019773	tsen54	98	63.800	ENSORLG00015009413	tsen54	99	64.113	Oryzias_latipes_hsok
ENSMAMG00000019773	tsen54	100	65.354	ENSOMEG00000014402	tsen54	97	65.354	Oryzias_melastigma
ENSMAMG00000019773	tsen54	97	44.291	ENSOGAG00000001442	TSEN54	97	44.291	Otolemur_garnettii
ENSMAMG00000019773	tsen54	86	40.043	ENSOARG00000010361	TSEN54	99	40.741	Ovis_aries
ENSMAMG00000019773	tsen54	94	44.554	ENSPPAG00000043519	TSEN54	99	44.664	Pan_paniscus
ENSMAMG00000019773	tsen54	98	43.619	ENSPPRG00000009162	TSEN54	98	44.782	Panthera_pardus
ENSMAMG00000019773	tsen54	86	41.649	ENSPTIG00000019312	TSEN54	96	43.355	Panthera_tigris_altaica
ENSMAMG00000019773	tsen54	98	44.381	ENSPTRG00000009646	TSEN54	98	45.143	Pan_troglodytes
ENSMAMG00000019773	tsen54	98	43.595	ENSPANG00000020133	TSEN54	97	44.762	Papio_anubis
ENSMAMG00000019773	tsen54	98	55.805	ENSPKIG00000023018	tsen54	99	55.769	Paramormyrops_kingsleyae
ENSMAMG00000019773	tsen54	80	44.342	ENSPSIG00000012807	TSEN54	100	44.213	Pelodiscus_sinensis
ENSMAMG00000019773	tsen54	93	48.755	ENSPMGG00000019578	tsen54	100	48.025	Periophthalmus_magnuspinnatus
ENSMAMG00000019773	tsen54	98	44.015	ENSPEMG00000014857	Tsen54	98	44.402	Peromyscus_maniculatus_bairdii
ENSMAMG00000019773	tsen54	100	70.428	ENSPFOG00000022740	tsen54	100	70.428	Poecilia_formosa
ENSMAMG00000019773	tsen54	100	70.392	ENSPLAG00000014847	tsen54	100	70.392	Poecilia_latipinna
ENSMAMG00000019773	tsen54	100	70.588	ENSPMEG00000022876	tsen54	100	70.588	Poecilia_mexicana
ENSMAMG00000019773	tsen54	100	70.000	ENSPREG00000013090	tsen54	100	69.412	Poecilia_reticulata
ENSMAMG00000019773	tsen54	91	44.894	ENSPPYG00000008629	TSEN54	99	44.043	Pongo_abelii
ENSMAMG00000019773	tsen54	95	39.489	ENSPCAG00000002093	TSEN54	75	58.235	Procavia_capensis
ENSMAMG00000019773	tsen54	77	62.941	ENSPCOG00000027880	TSEN54	98	43.396	Propithecus_coquereli
ENSMAMG00000019773	tsen54	98	44.213	ENSPVAG00000008446	TSEN54	79	58.549	Pteropus_vampyrus
ENSMAMG00000019773	tsen54	94	73.642	ENSPNYG00000010217	tsen54	100	73.642	Pundamilia_nyererei
ENSMAMG00000019773	tsen54	97	57.988	ENSPNAG00000003770	tsen54	97	57.708	Pygocentrus_nattereri
ENSMAMG00000019773	tsen54	98	45.560	ENSRNOG00000004598	Tsen54	98	45.560	Rattus_norvegicus
ENSMAMG00000019773	tsen54	98	44.762	ENSRBIG00000043040	TSEN54	98	44.571	Rhinopithecus_bieti
ENSMAMG00000019773	tsen54	98	44.762	ENSRROG00000030797	TSEN54	98	44.571	Rhinopithecus_roxellana
ENSMAMG00000019773	tsen54	98	41.459	ENSSBOG00000013543	TSEN54	97	41.843	Saimiri_boliviensis_boliviensis
ENSMAMG00000019773	tsen54	97	42.586	ENSSHAG00000018127	TSEN54	96	42.639	Sarcophilus_harrisii
ENSMAMG00000019773	tsen54	80	56.190	ENSSFOG00015004093	tsen54	99	55.952	Scleropages_formosus
ENSMAMG00000019773	tsen54	97	71.739	ENSSMAG00000012449	tsen54	98	71.992	Scophthalmus_maximus
ENSMAMG00000019773	tsen54	100	80.539	ENSSDUG00000021506	tsen54	100	80.154	Seriola_dumerili
ENSMAMG00000019773	tsen54	100	79.961	ENSSLDG00000016303	tsen54	100	79.769	Seriola_lalandi_dorsalis
ENSMAMG00000019773	tsen54	79	45.070	ENSSPUG00000008988	TSEN54	96	45.070	Sphenodon_punctatus
ENSMAMG00000019773	tsen54	93	78.261	ENSSPAG00000008098	-	100	78.261	Stegastes_partitus
ENSMAMG00000019773	tsen54	81	71.122	ENSSPAG00000008047	tsen54	100	71.122	Stegastes_partitus
ENSMAMG00000019773	tsen54	97	43.774	ENSSSCG00000036852	TSEN54	97	44.359	Sus_scrofa
ENSMAMG00000019773	tsen54	86	45.898	ENSTGUG00000008548	TSEN54	99	45.898	Taeniopygia_guttata
ENSMAMG00000019773	tsen54	100	67.446	ENSTRUG00000004230	tsen54	100	66.797	Takifugu_rubripes
ENSMAMG00000019773	tsen54	97	62.948	ENSTNIG00000011281	tsen54	98	63.905	Tetraodon_nigroviridis
ENSMAMG00000019773	tsen54	86	40.773	ENSTTRG00000015828	TSEN54	99	42.004	Tursiops_truncatus
ENSMAMG00000019773	tsen54	80	42.369	ENSUAMG00000010045	TSEN54	99	41.458	Ursus_americanus
ENSMAMG00000019773	tsen54	83	42.094	ENSUMAG00000008979	TSEN54	99	41.943	Ursus_maritimus
ENSMAMG00000019773	tsen54	96	43.580	ENSVVUG00000011411	TSEN54	97	44.531	Vulpes_vulpes
ENSMAMG00000019773	tsen54	97	44.618	ENSXETG00000012532	tsen54	99	62.069	Xenopus_tropicalis
ENSMAMG00000019773	tsen54	97	62.424	ENSXCOG00000018245	tsen54	100	64.833	Xiphophorus_couchianus
ENSMAMG00000019773	tsen54	100	70.588	ENSXMAG00000018818	tsen54	100	70.588	Xiphophorus_maculatus