EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMAMG00000020097 (Gene tree)
Gene ID
113142993
Gene Symbol
RPA1 (1 of many)
Alias
HSSB|REPA1|RF-A|RP-A|RPA70
Full Name
replication protein A 70 kDa DNA-binding subunit-like
Gene Type
protein_coding
Species
Mastacembelus_armatus
Status
putative
Strand
Plus strand
Length
34271 bases
Position
chrOOHQ01000002.1:18481097-18515367
Accession
113142993
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMAMP00000029820tRNA_anti-codonPF01336.251.9e-1011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMAMT00000030593RPA1 (1 of many)-2014050XM_026328403ENSMAMP00000029820672 (aa)XP_026184188UPI000E462A09
Gene Model
Click here to download ENSMAMG00000020097's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000020097's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMAMG00000020097RPA18869.108ENSMAMG00000017993rpa19970.000
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMAMG00000020097RPA19978.788ENSAPOG00000019409RPA19978.986Acanthochromis_polyacanthus
ENSMAMG00000020097RPA18270.872ENSAPOG00000011658rpa19471.395Acanthochromis_polyacanthus
ENSMAMG00000020097RPA19752.680ENSAMEG00000007706RPA19652.680Ailuropoda_melanoleuca
ENSMAMG00000020097RPA18060.780ENSACIG00000007277rpa19261.163Amphilophus_citrinellus
ENSMAMG00000020097RPA19676.935ENSACIG00000012881RPA19977.399Amphilophus_citrinellus
ENSMAMG00000020097RPA19958.921ENSAOCG00000023376rpa19770.930Amphiprion_ocellaris
ENSMAMG00000020097RPA19978.009ENSAOCG00000009003RPA19978.009Amphiprion_ocellaris
ENSMAMG00000020097RPA19979.792ENSAPEG00000019132RPA19979.495Amphiprion_percula
ENSMAMG00000020097RPA17970.481ENSAPEG00000008634rpa19771.163Amphiprion_percula
ENSMAMG00000020097RPA19982.143ENSATEG00000006443RPA19982.143Anabas_testudineus
ENSMAMG00000020097RPA17970.413ENSATEG00000022024rpa19270.930Anabas_testudineus
ENSMAMG00000020097RPA18853.143ENSAPLG00000012442RPA110053.143Anas_platyrhynchos
ENSMAMG00000020097RPA19057.391ENSACAG00000014490RPA19859.447Anolis_carolinensis
ENSMAMG00000020097RPA19753.221ENSANAG00000023456RPA19763.194Aotus_nancymaae
ENSMAMG00000020097RPA19977.232ENSACLG00000005223RPA19977.232Astatotilapia_calliptera
ENSMAMG00000020097RPA17871.789ENSACLG00000006640rpa19372.326Astatotilapia_calliptera
ENSMAMG00000020097RPA19369.977ENSAMXG00000008418rpa19570.698Astyanax_mexicanus
ENSMAMG00000020097RPA19951.335ENSBTAG00000009711RPA19951.335Bos_taurus
ENSMAMG00000020097RPA18462.054ENSCJAG00000001848RPA19951.780Callithrix_jacchus
ENSMAMG00000020097RPA19952.290ENSCAFG00000019249RPA19952.148Canis_familiaris
ENSMAMG00000020097RPA19952.290ENSCAFG00020009847RPA19952.148Canis_lupus_dingo
ENSMAMG00000020097RPA19160.491ENSCHIG00000026308RPA19951.632Capra_hircus
ENSMAMG00000020097RPA19952.593ENSTSYG00000003482-9363.194Carlito_syrichta
ENSMAMG00000020097RPA19952.515ENSCPOG00000000035RPA19952.522Cavia_porcellus
ENSMAMG00000020097RPA18451.562ENSCCAG00000010981RPA19944.955Cebus_capucinus
ENSMAMG00000020097RPA19950.222ENSCLAG00000015045-9950.371Chinchilla_lanigera
ENSMAMG00000020097RPA19953.550ENSCLAG00000005185-9953.709Chinchilla_lanigera
ENSMAMG00000020097RPA18551.562ENSCSAG00000013833RPA19945.252Chlorocebus_sabaeus
ENSMAMG00000020097RPA19651.548ENSCHOG00000013540-9951.393Choloepus_hoffmanni
ENSMAMG00000020097RPA16462.989ENSCHOG00000009454-9863.426Choloepus_hoffmanni
ENSMAMG00000020097RPA19359.053ENSCPBG00000020377RPA19263.426Chrysemys_picta_bellii
ENSMAMG00000020097RPA18745.806ENSCING00000023482-9146.991Ciona_intestinalis
ENSMAMG00000020097RPA18662.500ENSCANG00000030911RPA19863.657Colobus_angolensis_palliatus
ENSMAMG00000020097RPA19951.637ENSCGRG00001008197Rpa19951.935Cricetulus_griseus_chok1gshd
ENSMAMG00000020097RPA17655.899ENSCGRG00000000582Rpa18462.791Cricetulus_griseus_crigri
ENSMAMG00000020097RPA19965.425ENSCSEG00000012726RPA19965.869Cynoglossus_semilaevis
ENSMAMG00000020097RPA19956.072ENSCSEG00000013066rpa19467.907Cynoglossus_semilaevis
ENSMAMG00000020097RPA19677.042ENSCVAG00000013446-9677.042Cyprinodon_variegatus
ENSMAMG00000020097RPA18568.304ENSCVAG00000019431rpa19569.838Cyprinodon_variegatus
ENSMAMG00000020097RPA19967.223ENSDARG00000003938rpa19971.860Danio_rerio
ENSMAMG00000020097RPA19951.051ENSDNOG00000017218RPA19851.051Dasypus_novemcinctus
ENSMAMG00000020097RPA19560.833ENSDORG00000006199Rpa19953.264Dipodomys_ordii
ENSMAMG00000020097RPA18543.823FBgn0010173RpA-709644.289Drosophila_melanogaster
ENSMAMG00000020097RPA18563.265ENSETEG00000017608RPA18363.265Echinops_telfairi
ENSMAMG00000020097RPA19652.769ENSEASG00005009372RPA19762.963Equus_asinus_asinus
ENSMAMG00000020097RPA19951.929ENSECAG00000023886RPA19952.226Equus_caballus
ENSMAMG00000020097RPA16263.636ENSEEUG00000002186-6863.636Erinaceus_europaeus
ENSMAMG00000020097RPA19957.887ENSELUG00000021071rpa19957.887Esox_lucius
ENSMAMG00000020097RPA17572.662ENSELUG00000006136RPA19972.662Esox_lucius
ENSMAMG00000020097RPA19952.374ENSFCAG00000006306RPA19952.077Felis_catus
ENSMAMG00000020097RPA19951.852ENSFALG00000006575RPA19951.852Ficedula_albicollis
ENSMAMG00000020097RPA19952.671ENSFDAG00000007720RPA19952.593Fukomys_damarensis
ENSMAMG00000020097RPA19956.972ENSFHEG00000003580rpa19068.605Fundulus_heteroclitus
ENSMAMG00000020097RPA18768.650ENSGMOG00000010382rpa19969.302Gadus_morhua
ENSMAMG00000020097RPA19060.938ENSGALG00000003072RPA19862.269Gallus_gallus
ENSMAMG00000020097RPA19962.651ENSGAFG00000012916rpa19869.302Gambusia_affinis
ENSMAMG00000020097RPA19976.190ENSGAFG00000020953RPA19976.190Gambusia_affinis
ENSMAMG00000020097RPA19268.409ENSGACG00000010856rpa19369.302Gasterosteus_aculeatus
ENSMAMG00000020097RPA18862.277ENSGAGG00000013611RPA19263.426Gopherus_agassizii
ENSMAMG00000020097RPA18862.277ENSGGOG00000014186RPA19963.426Gorilla_gorilla
ENSMAMG00000020097RPA18770.701ENSHBUG00000009348RPA19869.038Haplochromis_burtoni
ENSMAMG00000020097RPA19958.321ENSHBUG00000017773rpa19772.093Haplochromis_burtoni
ENSMAMG00000020097RPA18663.216ENSHGLG00000008846RPA110052.967Heterocephalus_glaber_female
ENSMAMG00000020097RPA19948.516ENSHGLG00100000799-9260.417Heterocephalus_glaber_male
ENSMAMG00000020097RPA18354.005ENSHGLG00100002005-9945.441Heterocephalus_glaber_male
ENSMAMG00000020097RPA18663.216ENSHGLG00100017755-10052.967Heterocephalus_glaber_male
ENSMAMG00000020097RPA19362.613ENSHCOG00000001401rpa19953.453Hippocampus_comes
ENSMAMG00000020097RPA18356.840ENSHCOG00000000351RPA19956.440Hippocampus_comes
ENSMAMG00000020097RPA19369.526ENSIPUG00000004400rpa19970.465Ictalurus_punctatus
ENSMAMG00000020097RPA19551.227ENSSTOG00000022475RPA19562.326Ictidomys_tridecemlineatus
ENSMAMG00000020097RPA19653.385ENSJJAG00000000876Rpa19853.241Jaculus_jaculus
ENSMAMG00000020097RPA18368.009ENSKMAG00000005605rpa19369.606Kryptolebias_marmoratus
ENSMAMG00000020097RPA19970.728ENSKMAG00000000234RPA19970.728Kryptolebias_marmoratus
ENSMAMG00000020097RPA18966.958ENSLBEG00000021604rpa19968.910Labrus_bergylta
ENSMAMG00000020097RPA19975.387ENSLBEG00000002281RPA19975.387Labrus_bergylta
ENSMAMG00000020097RPA17155.301ENSLACG00000007210RPA19753.831Latimeria_chalumnae
ENSMAMG00000020097RPA19961.290ENSLOCG00000006397rpa19961.492Lepisosteus_oculatus
ENSMAMG00000020097RPA19752.914ENSLAFG00000015354RPA19950.505Loxodonta_africana
ENSMAMG00000020097RPA16862.108ENSMFAG00000036138-9856.296Macaca_fascicularis
ENSMAMG00000020097RPA19854.819ENSMMUG00000002442-9954.819Macaca_mulatta
ENSMAMG00000020097RPA18462.054ENSMMUG00000011604-9952.174Macaca_mulatta
ENSMAMG00000020097RPA17758.000ENSMNEG00000029837-9358.986Macaca_nemestrina
ENSMAMG00000020097RPA18161.384ENSMNEG00000031632-9852.315Macaca_nemestrina
ENSMAMG00000020097RPA18259.375ENSMLEG00000038768-9849.235Mandrillus_leucophaeus
ENSMAMG00000020097RPA19977.232ENSMZEG00005024731RPA19977.232Maylandia_zebra
ENSMAMG00000020097RPA19958.171ENSMZEG00005007551rpa19772.093Maylandia_zebra
ENSMAMG00000020097RPA18960.268ENSMGAG00000005315RPA19661.574Meleagris_gallopavo
ENSMAMG00000020097RPA18260.832ENSMAUG00000010474Rpa19853.077Mesocricetus_auratus
ENSMAMG00000020097RPA19952.530ENSMICG00000012867RPA19952.530Microcebus_murinus
ENSMAMG00000020097RPA19951.187ENSMOCG00000013019Rpa19951.339Microtus_ochrogaster
ENSMAMG00000020097RPA19970.695ENSMMOG00000010868RPA19683.453Mola_mola
ENSMAMG00000020097RPA19956.372ENSMMOG00000014292rpa19958.089Mola_mola
ENSMAMG00000020097RPA19951.187ENSMODG00000010549RPA19963.657Monodelphis_domestica
ENSMAMG00000020097RPA19975.453ENSMALG00000001208RPA19976.011Monopterus_albus
ENSMAMG00000020097RPA18469.545ENSMALG00000011453rpa19270.794Monopterus_albus
ENSMAMG00000020097RPA19952.374MGP_CAROLIEiJ_G0016734Rpa19952.232Mus_caroli
ENSMAMG00000020097RPA19951.786ENSMUSG00000000751Rpa19951.935Mus_musculus
ENSMAMG00000020097RPA19952.077MGP_PahariEiJ_G0017871Rpa19952.452Mus_pahari
ENSMAMG00000020097RPA19951.935MGP_SPRETEiJ_G0017577Rpa19952.083Mus_spretus
ENSMAMG00000020097RPA19951.484ENSMPUG00000013119RPA19762.500Mustela_putorius_furo
ENSMAMG00000020097RPA19753.374ENSMLUG00000006113RPA19553.681Myotis_lucifugus
ENSMAMG00000020097RPA19652.859ENSNGAG00000004522Rpa19453.168Nannospalax_galili
ENSMAMG00000020097RPA17971.330ENSNBRG00000020595rpa19371.860Neolamprologus_brichardi
ENSMAMG00000020097RPA19968.966ENSNBRG00000009672RPA19768.966Neolamprologus_brichardi
ENSMAMG00000020097RPA18462.277ENSNLEG00000017149RPA19953.264Nomascus_leucogenys
ENSMAMG00000020097RPA18861.856ENSMEUG00000006714RPA18861.856Notamacropus_eugenii
ENSMAMG00000020097RPA19653.467ENSODEG00000009038RPA19653.241Octodon_degus
ENSMAMG00000020097RPA19957.997ENSONIG00000013135rpa19957.871Oreochromis_niloticus
ENSMAMG00000020097RPA19851.964ENSOANG00000010880RPA19463.048Ornithorhynchus_anatinus
ENSMAMG00000020097RPA19950.791ENSOCUG00000001504RPA19862.963Oryctolagus_cuniculus
ENSMAMG00000020097RPA110073.412ENSORLG00000003368RPA110072.981Oryzias_latipes
ENSMAMG00000020097RPA16670.404ENSORLG00000004856rpa19271.628Oryzias_latipes
ENSMAMG00000020097RPA19958.321ENSORLG00020008980rpa19271.860Oryzias_latipes_hni
ENSMAMG00000020097RPA110073.862ENSORLG00020015284RPA110073.499Oryzias_latipes_hni
ENSMAMG00000020097RPA19958.321ENSORLG00015013982rpa19271.860Oryzias_latipes_hsok
ENSMAMG00000020097RPA110072.511ENSORLG00015020383RPA110072.230Oryzias_latipes_hsok
ENSMAMG00000020097RPA16580.320ENSORLG00015005867-9977.876Oryzias_latipes_hsok
ENSMAMG00000020097RPA19967.016ENSOMEG00000011040RPA19869.147Oryzias_melastigma
ENSMAMG00000020097RPA19267.277ENSOMEG00000004704rpa19967.674Oryzias_melastigma
ENSMAMG00000020097RPA18162.827ENSOGAG00000029379-9962.827Otolemur_garnettii
ENSMAMG00000020097RPA19952.671ENSOGAG00000005581-9952.593Otolemur_garnettii
ENSMAMG00000020097RPA19160.491ENSOARG00000014479RPA19951.632Ovis_aries
ENSMAMG00000020097RPA19162.054ENSPPAG00000039680RPA19953.116Pan_paniscus
ENSMAMG00000020097RPA19952.537ENSPPRG00000011807RPA19951.940Panthera_pardus
ENSMAMG00000020097RPA19952.374ENSPTIG00000007898RPA19951.780Panthera_tigris_altaica
ENSMAMG00000020097RPA19162.277ENSPTRG00000008539RPA19953.116Pan_troglodytes
ENSMAMG00000020097RPA18562.054ENSPANG00000024592RPA19952.077Papio_anubis
ENSMAMG00000020097RPA17869.779ENSPKIG00000008053rpa19457.566Paramormyrops_kingsleyae
ENSMAMG00000020097RPA19750.767ENSPSIG00000015617RPA19851.227Pelodiscus_sinensis
ENSMAMG00000020097RPA19175.630ENSPMGG00000000543RPA19979.054Periophthalmus_magnuspinnatus
ENSMAMG00000020097RPA18468.904ENSPMGG00000011589rpa19370.930Periophthalmus_magnuspinnatus
ENSMAMG00000020097RPA19951.488ENSPEMG00000021061Rpa19951.637Peromyscus_maniculatus_bairdii
ENSMAMG00000020097RPA18363.409ENSPCIG00000019049RPA19952.000Phascolarctos_cinereus
ENSMAMG00000020097RPA19957.186ENSPFOG00000003987rpa19268.837Poecilia_formosa
ENSMAMG00000020097RPA19957.036ENSPLAG00000004984rpa19957.036Poecilia_latipinna
ENSMAMG00000020097RPA19575.312ENSPLAG00000008844-9775.312Poecilia_latipinna
ENSMAMG00000020097RPA19575.625ENSPMEG00000003627-9775.625Poecilia_mexicana
ENSMAMG00000020097RPA19262.249ENSPMEG00000020602rpa19668.837Poecilia_mexicana
ENSMAMG00000020097RPA17861.386ENSPREG00000010174rpa18861.809Poecilia_reticulata
ENSMAMG00000020097RPA19976.393ENSPREG00000010119RPA110075.730Poecilia_reticulata
ENSMAMG00000020097RPA19951.786ENSPCOG00000001799RPA19952.303Propithecus_coquereli
ENSMAMG00000020097RPA19951.484ENSPVAG00000002149RPA19951.484Pteropus_vampyrus
ENSMAMG00000020097RPA19958.321ENSPNYG00000016316rpa19772.326Pundamilia_nyererei
ENSMAMG00000020097RPA19977.381ENSPNYG00000024165RPA19977.381Pundamilia_nyererei
ENSMAMG00000020097RPA19060.699ENSPNAG00000008599rpa19658.861Pygocentrus_nattereri
ENSMAMG00000020097RPA18660.613ENSRNOG00000003123Rpa19952.381Rattus_norvegicus
ENSMAMG00000020097RPA19957.371ENSRBIG00000036587RPA19957.371Rhinopithecus_bieti
ENSMAMG00000020097RPA19952.988ENSRROG00000043278RPA19952.988Rhinopithecus_roxellana
ENSMAMG00000020097RPA16734.716YAR007CRFA17035.321Saccharomyces_cerevisiae
ENSMAMG00000020097RPA17662.500ENSSBOG00000030233RPA19753.150Saimiri_boliviensis_boliviensis
ENSMAMG00000020097RPA16563.864ENSSHAG00000007969RPA19553.528Sarcophilus_harrisii
ENSMAMG00000020097RPA19370.044ENSSFOG00015005362rpa19171.926Scleropages_formosus
ENSMAMG00000020097RPA19978.689ENSSMAG00000019746RPA19978.869Scophthalmus_maximus
ENSMAMG00000020097RPA19170.203ENSSDUG00000011949rpa19871.395Seriola_dumerili
ENSMAMG00000020097RPA19983.211ENSSDUG00000016358RPA19983.358Seriola_dumerili
ENSMAMG00000020097RPA19981.579ENSSLDG00000020784RPA19981.725Seriola_lalandi_dorsalis
ENSMAMG00000020097RPA19169.752ENSSLDG00000011806rpa19871.163Seriola_lalandi_dorsalis
ENSMAMG00000020097RPA18765.625ENSSARG00000007506RPA18265.625Sorex_araneus
ENSMAMG00000020097RPA19749.387ENSSPUG00000007223RPA19854.527Sphenodon_punctatus
ENSMAMG00000020097RPA19971.045ENSSPAG00000011165RPA19871.861Stegastes_partitus
ENSMAMG00000020097RPA19464.754ENSSPAG00000009903rpa19957.421Stegastes_partitus
ENSMAMG00000020097RPA18861.830ENSSSCG00000017822RPA19863.426Sus_scrofa
ENSMAMG00000020097RPA19951.263ENSTGUG00000005775RPA19950.742Taeniopygia_guttata
ENSMAMG00000020097RPA19969.018ENSTRUG00000000405RPA19969.748Takifugu_rubripes
ENSMAMG00000020097RPA18967.045ENSTRUG00000003616rpa19768.140Takifugu_rubripes
ENSMAMG00000020097RPA19956.886ENSTNIG00000016199rpa19957.015Tetraodon_nigroviridis
ENSMAMG00000020097RPA16563.554ENSTBEG00000002709RPA17264.120Tupaia_belangeri
ENSMAMG00000020097RPA19160.352ENSTTRG00000001169RPA19951.335Tursiops_truncatus
ENSMAMG00000020097RPA17873.077ENSUAMG00000015676RPA19573.077Ursus_americanus
ENSMAMG00000020097RPA19061.384ENSUMAG00000009328RPA19963.194Ursus_maritimus
ENSMAMG00000020097RPA19950.450ENSVPAG00000009443RPA19950.450Vicugna_pacos
ENSMAMG00000020097RPA19951.923ENSVVUG00000021715RPA19952.000Vulpes_vulpes
ENSMAMG00000020097RPA18264.465ENSXETG00000013538rpa19665.197Xenopus_tropicalis
ENSMAMG00000020097RPA17868.317ENSXCOG00000010068rpa18868.844Xiphophorus_couchianus
ENSMAMG00000020097RPA19668.429ENSXCOG00000009899-9968.429Xiphophorus_couchianus
ENSMAMG00000020097RPA19973.126ENSXMAG00000010333RPA19973.267Xiphophorus_maculatus
ENSMAMG00000020097RPA19262.048ENSXMAG00000004102rpa19268.605Xiphophorus_maculatus

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