EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000020135 (Gene tree)
Gene ID: 113138495
Gene Symbol: zgc:171927
Alias: -
Full Name: ras-related protein ORAB-1-like
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 2170 bases
Position: chrOOHQ01000107.1:47017019-47019188
Accession: 113138495
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000029856	MMR_HSR1	PF01926.23	4.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000030630	-	645	XM_026320986	ENSMAMP00000029856	214 (aa)	XP_026176771	UPI000E460B72

Gene Model

Click here to download ENSMAMG00000020135's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000020135's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000020135	zgc:171927	86	50.000	ENSMAMG00000011973	rab30	94	50.000
ENSMAMG00000020135	zgc:171927	79	45.562	ENSMAMG00000018450	-	79	45.562
ENSMAMG00000020135	zgc:171927	79	52.976	ENSMAMG00000017327	rab11a	78	52.976
ENSMAMG00000020135	zgc:171927	76	44.785	ENSMAMG00000022322	rab5c	80	43.182
ENSMAMG00000020135	zgc:171927	96	37.379	ENSMAMG00000009672	rab6ba	94	37.379
ENSMAMG00000020135	zgc:171927	79	43.860	ENSMAMG00000021329	RAB39B	80	43.860
ENSMAMG00000020135	zgc:171927	73	35.758	ENSMAMG00000000238	rab32b	74	35.758
ENSMAMG00000020135	zgc:171927	91	36.634	ENSMAMG00000012488	rab6a	92	36.634
ENSMAMG00000020135	zgc:171927	80	43.275	ENSMAMG00000016207	-	78	43.275
ENSMAMG00000020135	zgc:171927	55	30.508	ENSMAMG00000016958	arl8ba	67	30.508
ENSMAMG00000020135	zgc:171927	83	37.912	ENSMAMG00000010136	rab36	66	37.912
ENSMAMG00000020135	zgc:171927	77	38.462	ENSMAMG00000020246	-	82	38.462
ENSMAMG00000020135	zgc:171927	79	37.640	ENSMAMG00000009927	rab9b	84	37.640
ENSMAMG00000020135	zgc:171927	98	42.381	ENSMAMG00000012471	rab25a	95	42.381
ENSMAMG00000020135	zgc:171927	79	34.503	ENSMAMG00000013700	si:ch73-116o1.2	80	35.119
ENSMAMG00000020135	zgc:171927	76	37.195	ENSMAMG00000004359	hrasb	86	37.195
ENSMAMG00000020135	zgc:171927	79	50.595	ENSMAMG00000006378	rab11bb	77	50.595
ENSMAMG00000020135	zgc:171927	80	38.764	ENSMAMG00000021095	si:dkey-13a21.4	87	38.764
ENSMAMG00000020135	zgc:171927	86	40.206	ENSMAMG00000012750	rab14	94	40.206
ENSMAMG00000020135	zgc:171927	99	44.550	ENSMAMG00000010278	rab11al	96	44.550
ENSMAMG00000020135	zgc:171927	82	33.149	ENSMAMG00000001320	si:cabz01085950.1	75	33.149
ENSMAMG00000020135	zgc:171927	73	38.462	ENSMAMG00000015456	rab23	87	37.079
ENSMAMG00000020135	zgc:171927	96	37.619	ENSMAMG00000020214	rab34b	80	37.619
ENSMAMG00000020135	zgc:171927	82	33.708	ENSMAMG00000006281	rheb	94	33.708
ENSMAMG00000020135	zgc:171927	55	32.203	ENSMAMG00000013640	arl8a	63	32.203
ENSMAMG00000020135	zgc:171927	92	74.619	ENSMAMG00000018306	-	98	74.619
ENSMAMG00000020135	zgc:171927	94	52.239	ENSMAMG00000014602	rab13	100	52.239
ENSMAMG00000020135	zgc:171927	81	32.571	ENSMAMG00000001748	rhebl1	93	32.571
ENSMAMG00000020135	zgc:171927	98	44.286	ENSMAMG00000010297	rab25b	93	44.286
ENSMAMG00000020135	zgc:171927	76	41.317	ENSMAMG00000000565	rab33a	71	41.317
ENSMAMG00000020135	zgc:171927	75	49.383	ENSMAMG00000018445	rab18b	79	49.383
ENSMAMG00000020135	zgc:171927	80	43.353	ENSMAMG00000002296	rab42a	79	43.353
ENSMAMG00000020135	zgc:171927	79	49.405	ENSMAMG00000018533	-	77	49.405
ENSMAMG00000020135	zgc:171927	84	44.134	ENSMAMG00000012573	rab5aa	83	44.134
ENSMAMG00000020135	zgc:171927	87	37.433	ENSMAMG00000020859	rab41	84	37.433
ENSMAMG00000020135	zgc:171927	72	46.154	ENSMAMG00000020286	-	75	46.154
ENSMAMG00000020135	zgc:171927	79	31.319	ENSMAMG00000014747	rasl11b	73	31.319
ENSMAMG00000020135	zgc:171927	80	50.000	ENSMAMG00000006886	RAB15	83	50.000
ENSMAMG00000020135	zgc:171927	86	34.211	ENSMAMG00000006963	RAB29	93	34.211
ENSMAMG00000020135	zgc:171927	82	39.548	ENSMAMG00000006024	rab22a	89	39.548
ENSMAMG00000020135	zgc:171927	72	37.736	ENSMAMG00000013538	rab9a	79	37.736
ENSMAMG00000020135	zgc:171927	93	73.267	ENSMAMG00000001408	rab1ba	96	77.778
ENSMAMG00000020135	zgc:171927	76	59.259	ENSMAMG00000019230	si:dkey-16l2.16	78	58.896
ENSMAMG00000020135	zgc:171927	53	38.596	ENSMAMG00000012997	RAP2B	93	38.889
ENSMAMG00000020135	zgc:171927	68	44.079	ENSMAMG00000006640	-	63	44.079
ENSMAMG00000020135	zgc:171927	77	38.462	ENSMAMG00000023962	RAB7A	82	38.462
ENSMAMG00000020135	zgc:171927	79	49.704	ENSMAMG00000002795	rab15	79	49.704
ENSMAMG00000020135	zgc:171927	96	33.333	ENSMAMG00000018672	rab34a	77	33.333
ENSMAMG00000020135	zgc:171927	75	39.752	ENSMAMG00000012233	rab6bb	77	39.752
ENSMAMG00000020135	zgc:171927	76	39.264	ENSMAMG00000005606	kras	91	38.150
ENSMAMG00000020135	zgc:171927	75	49.383	ENSMAMG00000014320	rab18a	79	49.383
ENSMAMG00000020135	zgc:171927	79	47.929	ENSMAMG00000011549	rab2a	99	40.476
ENSMAMG00000020135	zgc:171927	73	36.478	ENSMAMG00000008168	rabl2	68	36.478
ENSMAMG00000020135	zgc:171927	86	34.409	ENSMAMG00000004106	rras	92	34.409
ENSMAMG00000020135	zgc:171927	82	40.722	ENSMAMG00000001098	rab33ba	83	39.801
ENSMAMG00000020135	zgc:171927	79	50.000	ENSMAMG00000018556	rab11ba	77	50.000
ENSMAMG00000020135	zgc:171927	78	46.821	ENSMAMG00000017431	zgc:101559	74	46.821
ENSMAMG00000020135	zgc:171927	79	43.860	ENSMAMG00000011131	-	80	43.860
ENSMAMG00000020135	zgc:171927	65	30.464	ENSMAMG00000019501	arfrp1	71	30.464
ENSMAMG00000020135	zgc:171927	80	46.512	ENSMAMG00000006862	rab12	71	46.512

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000020135	zgc:171927	100	93.925	ENSAPOG00000004980	-	100	93.925	Acanthochromis_polyacanthus
ENSMAMG00000020135	zgc:171927	100	92.991	ENSACIG00000009006	zgc:171927	100	92.991	Amphilophus_citrinellus
ENSMAMG00000020135	zgc:171927	100	90.654	ENSAOCG00000024149	-	100	90.654	Amphiprion_ocellaris
ENSMAMG00000020135	zgc:171927	71	87.097	ENSAOCG00000013808	-	93	95.041	Amphiprion_ocellaris
ENSMAMG00000020135	zgc:171927	100	91.121	ENSAPEG00000022171	zgc:171927	99	91.121	Amphiprion_percula
ENSMAMG00000020135	zgc:171927	100	92.991	ENSATEG00000003430	zgc:171927	100	92.991	Anabas_testudineus
ENSMAMG00000020135	zgc:171927	100	92.991	ENSACLG00000013734	-	100	92.991	Astatotilapia_calliptera
ENSMAMG00000020135	zgc:171927	100	79.070	ENSAMXG00000039486	zgc:171927	100	79.070	Astyanax_mexicanus
ENSMAMG00000020135	zgc:171927	100	87.383	ENSCSEG00000014416	zgc:171927	100	87.383	Cynoglossus_semilaevis
ENSMAMG00000020135	zgc:171927	100	90.187	ENSCVAG00000009222	zgc:171927	100	90.187	Cyprinodon_variegatus
ENSMAMG00000020135	zgc:171927	100	77.209	ENSDARG00000033056	zgc:171927	100	77.209	Danio_rerio
ENSMAMG00000020135	zgc:171927	100	77.778	ENSELUG00000011680	zgc:171927	100	77.778	Esox_lucius
ENSMAMG00000020135	zgc:171927	100	90.654	ENSFHEG00000022176	zgc:171927	100	90.654	Fundulus_heteroclitus
ENSMAMG00000020135	zgc:171927	98	80.095	ENSGMOG00000004979	-	97	80.095	Gadus_morhua
ENSMAMG00000020135	zgc:171927	98	89.952	ENSGAFG00000015702	zgc:171927	84	89.952	Gambusia_affinis
ENSMAMG00000020135	zgc:171927	100	91.589	ENSGACG00000013401	zgc:171927	99	91.589	Gasterosteus_aculeatus
ENSMAMG00000020135	zgc:171927	100	92.991	ENSHBUG00000002397	-	100	92.991	Haplochromis_burtoni
ENSMAMG00000020135	zgc:171927	100	90.187	ENSKMAG00000009856	zgc:171927	100	90.187	Kryptolebias_marmoratus
ENSMAMG00000020135	zgc:171927	100	88.785	ENSLBEG00000005791	-	100	88.785	Labrus_bergylta
ENSMAMG00000020135	zgc:171927	98	88.038	ENSLBEG00000027226	-	89	88.038	Labrus_bergylta
ENSMAMG00000020135	zgc:171927	98	71.905	ENSLOCG00000014692	zgc:171927	96	71.905	Lepisosteus_oculatus
ENSMAMG00000020135	zgc:171927	100	92.991	ENSMZEG00005024685	-	100	92.991	Maylandia_zebra
ENSMAMG00000020135	zgc:171927	100	86.916	ENSMMOG00000009833	-	100	86.916	Mola_mola
ENSMAMG00000020135	zgc:171927	100	90.654	ENSMALG00000021129	zgc:171927	100	90.654	Monopterus_albus
ENSMAMG00000020135	zgc:171927	100	92.523	ENSNBRG00000006202	zgc:171927	100	92.523	Neolamprologus_brichardi
ENSMAMG00000020135	zgc:171927	100	87.850	ENSORLG00000000602	zgc:171927	100	87.850	Oryzias_latipes
ENSMAMG00000020135	zgc:171927	100	87.850	ENSORLG00020021071	zgc:171927	100	87.850	Oryzias_latipes_hni
ENSMAMG00000020135	zgc:171927	100	88.318	ENSORLG00015010098	zgc:171927	100	88.318	Oryzias_latipes_hsok
ENSMAMG00000020135	zgc:171927	100	88.785	ENSOMEG00000020594	zgc:171927	100	88.785	Oryzias_melastigma
ENSMAMG00000020135	zgc:171927	100	90.654	ENSPFOG00000013810	zgc:171927	99	90.654	Poecilia_formosa
ENSMAMG00000020135	zgc:171927	100	89.720	ENSPLAG00000005869	zgc:171927	100	89.720	Poecilia_latipinna
ENSMAMG00000020135	zgc:171927	100	90.654	ENSPMEG00000022350	zgc:171927	100	90.654	Poecilia_mexicana
ENSMAMG00000020135	zgc:171927	100	91.589	ENSPREG00000017517	zgc:171927	100	91.589	Poecilia_reticulata
ENSMAMG00000020135	zgc:171927	100	92.991	ENSPNYG00000007520	-	100	92.991	Pundamilia_nyererei
ENSMAMG00000020135	zgc:171927	100	79.070	ENSPNAG00000029574	zgc:171927	100	79.070	Pygocentrus_nattereri
ENSMAMG00000020135	zgc:171927	100	77.209	ENSSFOG00015005464	zgc:171927	99	77.209	Scleropages_formosus
ENSMAMG00000020135	zgc:171927	100	87.383	ENSSMAG00000004416	-	100	87.383	Scophthalmus_maximus
ENSMAMG00000020135	zgc:171927	100	93.925	ENSSDUG00000004445	zgc:171927	100	93.925	Seriola_dumerili
ENSMAMG00000020135	zgc:171927	100	93.925	ENSSLDG00000018024	zgc:171927	100	93.925	Seriola_lalandi_dorsalis
ENSMAMG00000020135	zgc:171927	100	93.925	ENSSPAG00000013533	zgc:171927	100	93.925	Stegastes_partitus
ENSMAMG00000020135	zgc:171927	100	91.121	ENSXCOG00000010695	zgc:171927	100	91.121	Xiphophorus_couchianus
ENSMAMG00000020135	zgc:171927	100	92.056	ENSXMAG00000004683	zgc:171927	100	92.056	Xiphophorus_maculatus