EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000020141 (Gene tree)
Gene ID: 113124449
Gene Symbol: prpf4
Alias: mg:ab03a02|zgc:65943
Full Name: pre-mRNA processing factor 4
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 7808 bases
Position: chrOOHQ01000096.1:20979362-20987169
Accession: 113124449
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000029860	PRP4	PF08799.11	7.1e-14	1	1
ENSMAMP00000029866	PRP4	PF08799.11	7.4e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000030640	-	1706	-	ENSMAMP00000029866	524 (aa)	-	-
ENSMAMT00000030634	-	1664	-	ENSMAMP00000029860	510 (aa)	XP_026153098	UPI000E45B7BE

Gene Model

Click here to download ENSMAMG00000020141's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000020141's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000020141	prpf4	55	31.034	ENSMAMG00000014233	POC1A	61	30.964
ENSMAMG00000020141	prpf4	57	31.220	ENSMAMG00000003827	wdr5	90	30.556
ENSMAMG00000020141	prpf4	59	30.178	ENSMAMG00000023507	tbl3	56	30.178
ENSMAMG00000020141	prpf4	57	31.429	ENSMAMG00000007841	rack1	95	31.429

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000020141	prpf4	99	76.134	ENSG00000136875	PRPF4	97	76.134	Homo_sapiens
ENSMAMG00000020141	prpf4	99	93.375	ENSAPOG00000014132	prpf4	99	93.375	Acanthochromis_polyacanthus
ENSMAMG00000020141	prpf4	99	76.134	ENSAMEG00000013048	PRPF4	95	76.134	Ailuropoda_melanoleuca
ENSMAMG00000020141	prpf4	100	94.510	ENSACIG00000005579	prpf4	100	94.510	Amphilophus_citrinellus
ENSMAMG00000020141	prpf4	100	93.529	ENSAOCG00000005457	prpf4	100	93.529	Amphiprion_ocellaris
ENSMAMG00000020141	prpf4	100	93.333	ENSAPEG00000000776	prpf4	100	93.333	Amphiprion_percula
ENSMAMG00000020141	prpf4	100	94.706	ENSATEG00000023013	prpf4	100	94.706	Anabas_testudineus
ENSMAMG00000020141	prpf4	99	76.331	ENSAPLG00000006534	PRPF4	94	76.331	Anas_platyrhynchos
ENSMAMG00000020141	prpf4	99	75.342	ENSACAG00000015110	PRPF4	98	75.342	Anolis_carolinensis
ENSMAMG00000020141	prpf4	99	76.134	ENSANAG00000022464	PRPF4	93	76.134	Aotus_nancymaae
ENSMAMG00000020141	prpf4	100	93.922	ENSACLG00000019031	prpf4	100	93.922	Astatotilapia_calliptera
ENSMAMG00000020141	prpf4	99	61.759	ENSAMXG00000006756	prpf4	99	73.373	Astyanax_mexicanus
ENSMAMG00000020141	prpf4	99	76.134	ENSBTAG00000004571	PRPF4	97	76.134	Bos_taurus
ENSMAMG00000020141	prpf4	93	43.908	WBGene00007972	prp-4	96	43.908	Caenorhabditis_elegans
ENSMAMG00000020141	prpf4	99	76.134	ENSCJAG00000017856	PRPF4	97	76.134	Callithrix_jacchus
ENSMAMG00000020141	prpf4	99	76.134	ENSCAFG00000003224	PRPF4	94	76.134	Canis_familiaris
ENSMAMG00000020141	prpf4	99	76.134	ENSCAFG00020022637	PRPF4	97	76.134	Canis_lupus_dingo
ENSMAMG00000020141	prpf4	99	76.134	ENSCHIG00000024648	-	97	76.134	Capra_hircus
ENSMAMG00000020141	prpf4	99	76.331	ENSTSYG00000010366	PRPF4	97	76.331	Carlito_syrichta
ENSMAMG00000020141	prpf4	90	68.735	ENSCAPG00000008935	PRPF4	97	68.735	Cavia_aperea
ENSMAMG00000020141	prpf4	99	70.809	ENSCPOG00000014729	-	97	71.525	Cavia_porcellus
ENSMAMG00000020141	prpf4	99	75.740	ENSCPOG00000010747	-	97	75.740	Cavia_porcellus
ENSMAMG00000020141	prpf4	99	75.937	ENSCCAG00000028990	PRPF4	97	75.937	Cebus_capucinus
ENSMAMG00000020141	prpf4	99	76.134	ENSCATG00000021552	PRPF4	97	76.134	Cercocebus_atys
ENSMAMG00000020141	prpf4	99	76.134	ENSCLAG00000013448	PRPF4	97	76.134	Chinchilla_lanigera
ENSMAMG00000020141	prpf4	89	75.885	ENSCHOG00000007233	PRPF4	100	75.885	Choloepus_hoffmanni
ENSMAMG00000020141	prpf4	100	75.686	ENSCPBG00000019136	PRPF4	73	75.686	Chrysemys_picta_bellii
ENSMAMG00000020141	prpf4	99	58.366	ENSCING00000001299	-	98	58.366	Ciona_intestinalis
ENSMAMG00000020141	prpf4	99	57.957	ENSCSAVG00000009178	-	99	59.740	Ciona_savignyi
ENSMAMG00000020141	prpf4	99	76.134	ENSCANG00000003246	PRPF4	97	76.134	Colobus_angolensis_palliatus
ENSMAMG00000020141	prpf4	99	75.937	ENSCGRG00001016992	Prpf4	97	75.937	Cricetulus_griseus_chok1gshd
ENSMAMG00000020141	prpf4	99	75.937	ENSCGRG00000017560	Prpf4	97	75.937	Cricetulus_griseus_crigri
ENSMAMG00000020141	prpf4	100	87.451	ENSCSEG00000020451	prpf4	100	87.451	Cynoglossus_semilaevis
ENSMAMG00000020141	prpf4	99	79.882	ENSDARG00000067639	prpf4	99	79.882	Danio_rerio
ENSMAMG00000020141	prpf4	99	75.937	ENSDNOG00000013203	PRPF4	97	75.937	Dasypus_novemcinctus
ENSMAMG00000020141	prpf4	99	76.529	ENSDORG00000026275	Prpf4	97	76.529	Dipodomys_ordii
ENSMAMG00000020141	prpf4	99	49.728	FBgn0036733	U4-U6-60K	99	50.091	Drosophila_melanogaster
ENSMAMG00000020141	prpf4	99	76.726	ENSETEG00000020389	PRPF4	97	76.726	Echinops_telfairi
ENSMAMG00000020141	prpf4	99	67.640	ENSEBUG00000015229	prpf4	96	64.213	Eptatretus_burgeri
ENSMAMG00000020141	prpf4	99	76.134	ENSEASG00005022678	PRPF4	97	76.134	Equus_asinus_asinus
ENSMAMG00000020141	prpf4	99	76.134	ENSECAG00000007072	PRPF4	97	76.134	Equus_caballus
ENSMAMG00000020141	prpf4	99	60.722	ENSEEUG00000007480	PRPF4	96	60.722	Erinaceus_europaeus
ENSMAMG00000020141	prpf4	99	80.671	ENSELUG00000007510	prpf4	99	80.671	Esox_lucius
ENSMAMG00000020141	prpf4	99	76.134	ENSFCAG00000005514	PRPF4	97	76.134	Felis_catus
ENSMAMG00000020141	prpf4	99	75.621	ENSFALG00000005423	PRPF4	86	75.506	Ficedula_albicollis
ENSMAMG00000020141	prpf4	99	76.134	ENSFDAG00000005839	PRPF4	97	76.134	Fukomys_damarensis
ENSMAMG00000020141	prpf4	100	90.000	ENSFHEG00000001300	prpf4	100	90.000	Fundulus_heteroclitus
ENSMAMG00000020141	prpf4	99	76.134	ENSGALG00000008857	PRPF4	94	76.134	Gallus_gallus
ENSMAMG00000020141	prpf4	94	86.626	ENSGAFG00000012164	prpf4	70	86.626	Gambusia_affinis
ENSMAMG00000020141	prpf4	100	81.445	ENSGACG00000015476	prpf4	100	81.250	Gasterosteus_aculeatus
ENSMAMG00000020141	prpf4	100	75.294	ENSGAGG00000025029	PRPF4	94	75.294	Gopherus_agassizii
ENSMAMG00000020141	prpf4	99	76.134	ENSGGOG00000006943	PRPF4	97	76.134	Gorilla_gorilla
ENSMAMG00000020141	prpf4	100	94.118	ENSHBUG00000000562	prpf4	100	94.118	Haplochromis_burtoni
ENSMAMG00000020141	prpf4	99	76.331	ENSHGLG00000015191	PRPF4	97	76.331	Heterocephalus_glaber_female
ENSMAMG00000020141	prpf4	95	65.849	ENSHGLG00000016628	-	95	66.258	Heterocephalus_glaber_female
ENSMAMG00000020141	prpf4	99	61.341	ENSHGLG00000003838	-	97	61.341	Heterocephalus_glaber_female
ENSMAMG00000020141	prpf4	99	61.341	ENSHGLG00100005571	-	97	61.341	Heterocephalus_glaber_male
ENSMAMG00000020141	prpf4	99	79.487	ENSIPUG00000017956	PRPF4	99	79.724	Ictalurus_punctatus
ENSMAMG00000020141	prpf4	99	76.331	ENSSTOG00000027833	PRPF4	97	76.331	Ictidomys_tridecemlineatus
ENSMAMG00000020141	prpf4	99	76.134	ENSJJAG00000008838	Prpf4	97	76.134	Jaculus_jaculus
ENSMAMG00000020141	prpf4	100	90.784	ENSKMAG00000013236	prpf4	100	90.784	Kryptolebias_marmoratus
ENSMAMG00000020141	prpf4	100	93.529	ENSLBEG00000020611	prpf4	100	93.529	Labrus_bergylta
ENSMAMG00000020141	prpf4	100	72.461	ENSLACG00000016317	PRPF4	97	72.461	Latimeria_chalumnae
ENSMAMG00000020141	prpf4	100	81.569	ENSLOCG00000000581	prpf4	100	81.569	Lepisosteus_oculatus
ENSMAMG00000020141	prpf4	99	76.134	ENSLAFG00000018225	PRPF4	97	76.134	Loxodonta_africana
ENSMAMG00000020141	prpf4	99	75.937	ENSMFAG00000039397	PRPF4	97	75.937	Macaca_fascicularis
ENSMAMG00000020141	prpf4	99	76.134	ENSMMUG00000005844	PRPF4	97	76.134	Macaca_mulatta
ENSMAMG00000020141	prpf4	99	67.850	ENSMNEG00000033737	PRPF4	97	67.850	Macaca_nemestrina
ENSMAMG00000020141	prpf4	99	76.134	ENSMLEG00000040284	PRPF4	97	76.134	Mandrillus_leucophaeus
ENSMAMG00000020141	prpf4	100	93.922	ENSMZEG00005023205	prpf4	100	93.922	Maylandia_zebra
ENSMAMG00000020141	prpf4	99	75.542	ENSMGAG00000001796	PRPF4	94	75.542	Meleagris_gallopavo
ENSMAMG00000020141	prpf4	99	75.937	ENSMAUG00000018022	Prpf4	97	75.937	Mesocricetus_auratus
ENSMAMG00000020141	prpf4	99	76.031	ENSMICG00000015022	PRPF4	97	76.031	Microcebus_murinus
ENSMAMG00000020141	prpf4	99	75.937	ENSMOCG00000018273	Prpf4	97	75.937	Microtus_ochrogaster
ENSMAMG00000020141	prpf4	100	90.588	ENSMMOG00000021177	prpf4	100	90.588	Mola_mola
ENSMAMG00000020141	prpf4	99	74.656	ENSMODG00000025096	-	94	74.951	Monodelphis_domestica
ENSMAMG00000020141	prpf4	99	75.442	ENSMODG00000004444	-	97	75.740	Monodelphis_domestica
ENSMAMG00000020141	prpf4	100	95.098	ENSMALG00000013624	prpf4	100	95.098	Monopterus_albus
ENSMAMG00000020141	prpf4	99	75.937	MGP_CAROLIEiJ_G0026078	Prpf4	97	75.937	Mus_caroli
ENSMAMG00000020141	prpf4	99	75.937	ENSMUSG00000066148	Prpf4	97	75.937	Mus_musculus
ENSMAMG00000020141	prpf4	99	76.134	MGP_PahariEiJ_G0028413	Prpf4	97	76.134	Mus_pahari
ENSMAMG00000020141	prpf4	99	75.937	MGP_SPRETEiJ_G0027042	Prpf4	97	75.937	Mus_spretus
ENSMAMG00000020141	prpf4	99	76.134	ENSMPUG00000007883	PRPF4	97	76.134	Mustela_putorius_furo
ENSMAMG00000020141	prpf4	99	75.098	ENSMLUG00000008626	-	94	75.098	Myotis_lucifugus
ENSMAMG00000020141	prpf4	99	75.937	ENSMLUG00000015309	-	94	75.937	Myotis_lucifugus
ENSMAMG00000020141	prpf4	99	71.006	ENSNGAG00000000468	Prpf4	97	71.006	Nannospalax_galili
ENSMAMG00000020141	prpf4	100	93.922	ENSNBRG00000007972	prpf4	100	93.922	Neolamprologus_brichardi
ENSMAMG00000020141	prpf4	99	76.134	ENSNLEG00000016647	PRPF4	97	76.134	Nomascus_leucogenys
ENSMAMG00000020141	prpf4	99	74.853	ENSMEUG00000013256	PRPF4	98	75.148	Notamacropus_eugenii
ENSMAMG00000020141	prpf4	99	76.331	ENSOPRG00000005302	PRPF4	97	76.331	Ochotona_princeps
ENSMAMG00000020141	prpf4	99	76.134	ENSODEG00000018147	PRPF4	97	76.134	Octodon_degus
ENSMAMG00000020141	prpf4	100	94.314	ENSONIG00000012671	prpf4	100	94.314	Oreochromis_niloticus
ENSMAMG00000020141	prpf4	99	76.331	ENSOCUG00000005046	PRPF4	97	76.331	Oryctolagus_cuniculus
ENSMAMG00000020141	prpf4	100	90.392	ENSORLG00000019641	prpf4	100	90.392	Oryzias_latipes
ENSMAMG00000020141	prpf4	100	90.392	ENSORLG00020019438	prpf4	100	90.392	Oryzias_latipes_hni
ENSMAMG00000020141	prpf4	100	88.824	ENSOMEG00000020941	prpf4	100	89.234	Oryzias_melastigma
ENSMAMG00000020141	prpf4	99	72.189	ENSOGAG00000007802	PRPF4	95	72.189	Otolemur_garnettii
ENSMAMG00000020141	prpf4	99	76.134	ENSOARG00000006319	PRPF4	94	76.134	Ovis_aries
ENSMAMG00000020141	prpf4	99	76.134	ENSPPAG00000041797	PRPF4	97	76.134	Pan_paniscus
ENSMAMG00000020141	prpf4	99	76.134	ENSPPRG00000014360	PRPF4	97	76.134	Panthera_pardus
ENSMAMG00000020141	prpf4	99	76.134	ENSPTIG00000009574	PRPF4	97	76.134	Panthera_tigris_altaica
ENSMAMG00000020141	prpf4	99	76.134	ENSPTRG00000021274	PRPF4	97	76.134	Pan_troglodytes
ENSMAMG00000020141	prpf4	99	76.331	ENSPANG00000025776	PRPF4	93	76.031	Papio_anubis
ENSMAMG00000020141	prpf4	100	80.784	ENSPKIG00000017259	prpf4	100	80.784	Paramormyrops_kingsleyae
ENSMAMG00000020141	prpf4	100	75.686	ENSPSIG00000010713	PRPF4	89	75.686	Pelodiscus_sinensis
ENSMAMG00000020141	prpf4	100	64.312	ENSPMGG00000000997	prpf4	98	65.428	Periophthalmus_magnuspinnatus
ENSMAMG00000020141	prpf4	99	75.937	ENSPEMG00000024115	Prpf4	97	75.937	Peromyscus_maniculatus_bairdii
ENSMAMG00000020141	prpf4	99	75.049	ENSPCIG00000003821	PRPF4	98	75.345	Phascolarctos_cinereus
ENSMAMG00000020141	prpf4	100	83.268	ENSPFOG00000013524	prpf4	99	86.626	Poecilia_formosa
ENSMAMG00000020141	prpf4	93	85.231	ENSPLAG00000011620	prpf4	97	85.139	Poecilia_latipinna
ENSMAMG00000020141	prpf4	98	87.021	ENSPMEG00000006813	prpf4	100	87.021	Poecilia_mexicana
ENSMAMG00000020141	prpf4	99	76.134	ENSPCAG00000002561	PRPF4	98	76.134	Procavia_capensis
ENSMAMG00000020141	prpf4	99	76.134	ENSPCOG00000011975	PRPF4	97	76.134	Propithecus_coquereli
ENSMAMG00000020141	prpf4	99	72.978	ENSPVAG00000004708	PRPF4	97	72.978	Pteropus_vampyrus
ENSMAMG00000020141	prpf4	100	94.118	ENSPNYG00000008013	prpf4	100	94.118	Pundamilia_nyererei
ENSMAMG00000020141	prpf4	99	80.868	ENSPNAG00000000697	prpf4	99	80.868	Pygocentrus_nattereri
ENSMAMG00000020141	prpf4	99	75.937	ENSRNOG00000014777	Prpf4	97	75.937	Rattus_norvegicus
ENSMAMG00000020141	prpf4	99	76.134	ENSRBIG00000040221	PRPF4	97	76.134	Rhinopithecus_bieti
ENSMAMG00000020141	prpf4	99	76.134	ENSRROG00000040240	PRPF4	97	76.134	Rhinopithecus_roxellana
ENSMAMG00000020141	prpf4	99	75.049	ENSSHAG00000017658	PRPF4	97	75.345	Sarcophilus_harrisii
ENSMAMG00000020141	prpf4	100	82.192	ENSSFOG00015008963	prpf4	100	82.192	Scleropages_formosus
ENSMAMG00000020141	prpf4	100	92.157	ENSSMAG00000008889	prpf4	100	92.157	Scophthalmus_maximus
ENSMAMG00000020141	prpf4	99	95.031	ENSSDUG00000022083	prpf4	94	95.031	Seriola_dumerili
ENSMAMG00000020141	prpf4	99	94.824	ENSSLDG00000008115	prpf4	94	94.824	Seriola_lalandi_dorsalis
ENSMAMG00000020141	prpf4	99	76.228	ENSSPUG00000015582	PRPF4	98	75.278	Sphenodon_punctatus
ENSMAMG00000020141	prpf4	100	86.745	ENSSPAG00000011286	prpf4	100	86.745	Stegastes_partitus
ENSMAMG00000020141	prpf4	99	76.134	ENSSSCG00000024648	PRPF4	97	76.134	Sus_scrofa
ENSMAMG00000020141	prpf4	97	77.172	ENSTGUG00000002623	PRPF4	100	77.597	Taeniopygia_guttata
ENSMAMG00000020141	prpf4	100	88.431	ENSTRUG00000008853	prpf4	100	88.431	Takifugu_rubripes
ENSMAMG00000020141	prpf4	100	89.237	ENSTNIG00000013250	prpf4	100	89.237	Tetraodon_nigroviridis
ENSMAMG00000020141	prpf4	99	69.034	ENSTBEG00000000821	PRPF4	97	69.034	Tupaia_belangeri
ENSMAMG00000020141	prpf4	89	78.859	ENSTTRG00000003246	PRPF4	85	78.859	Tursiops_truncatus
ENSMAMG00000020141	prpf4	70	66.852	ENSUAMG00000018288	PRPF4	96	67.227	Ursus_americanus
ENSMAMG00000020141	prpf4	99	75.542	ENSUMAG00000019375	PRPF4	97	75.542	Ursus_maritimus
ENSMAMG00000020141	prpf4	99	75.740	ENSVPAG00000005281	PRPF4	97	75.740	Vicugna_pacos
ENSMAMG00000020141	prpf4	99	75.740	ENSVVUG00000002476	PRPF4	99	75.740	Vulpes_vulpes
ENSMAMG00000020141	prpf4	70	64.624	ENSXCOG00000006101	prpf4	93	66.748	Xiphophorus_couchianus
ENSMAMG00000020141	prpf4	91	75.699	ENSXMAG00000002750	prpf4	100	76.863	Xiphophorus_maculatus