EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000020286 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 6957 bases
Position: chrOOHQ01000019.1:1633098-1640054
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000030087	MMR_HSR1	PF01926.23	0.00017	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000030877	-	543	-	ENSMAMP00000030092	180 (aa)	-	-
ENSMAMT00000030872	-	624	-	ENSMAMP00000030087	207 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000020286's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000020286's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000020286	-	74	33.766	ENSMAMG00000005606	kras	85	34.969
ENSMAMG00000020286	-	75	37.888	ENSMAMG00000000565	rab33a	68	37.888
ENSMAMG00000020286	-	76	44.304	ENSMAMG00000018556	rab11ba	74	44.304
ENSMAMG00000020286	-	76	45.912	ENSMAMG00000011131	-	74	45.912
ENSMAMG00000020286	-	75	43.590	ENSMAMG00000020859	rab41	74	43.590
ENSMAMG00000020286	-	75	46.154	ENSMAMG00000009672	rab6ba	75	46.154
ENSMAMG00000020286	-	71	33.784	ENSMAMG00000015456	rab23	76	35.185
ENSMAMG00000020286	-	73	45.752	ENSMAMG00000014320	rab18a	74	45.752
ENSMAMG00000020286	-	74	42.484	ENSMAMG00000006886	RAB15	72	42.484
ENSMAMG00000020286	-	75	45.513	ENSMAMG00000012488	rab6a	75	45.513
ENSMAMG00000020286	-	76	42.675	ENSMAMG00000022322	rab5c	71	42.675
ENSMAMG00000020286	-	76	43.396	ENSMAMG00000002296	rab42a	72	43.396
ENSMAMG00000020286	-	56	31.624	ENSMAMG00000016958	arl8ba	65	31.624
ENSMAMG00000020286	-	83	43.275	ENSMAMG00000010278	rab11al	77	43.275
ENSMAMG00000020286	-	73	41.830	ENSMAMG00000001098	rab33ba	65	41.401
ENSMAMG00000020286	-	56	31.624	ENSMAMG00000023379	arl8bb	60	31.624
ENSMAMG00000020286	-	73	46.405	ENSMAMG00000018445	rab18b	74	46.405
ENSMAMG00000020286	-	79	36.145	ENSMAMG00000010136	rab36	61	36.145
ENSMAMG00000020286	-	75	42.949	ENSMAMG00000001408	rab1ba	79	42.949
ENSMAMG00000020286	-	75	46.452	ENSMAMG00000017327	rab11a	72	46.452
ENSMAMG00000020286	-	76	39.130	ENSMAMG00000023962	RAB7A	77	39.130
ENSMAMG00000020286	-	56	33.333	ENSMAMG00000012997	RAP2B	93	34.127
ENSMAMG00000020286	-	86	41.899	ENSMAMG00000006862	rab12	71	41.899
ENSMAMG00000020286	-	69	37.415	ENSMAMG00000006281	rheb	77	37.415
ENSMAMG00000020286	-	77	38.509	ENSMAMG00000017431	zgc:101559	68	38.509
ENSMAMG00000020286	-	69	31.847	ENSMAMG00000010217	rasl11a	59	31.847
ENSMAMG00000020286	-	79	32.317	ENSMAMG00000008168	rabl2	71	32.317
ENSMAMG00000020286	-	76	45.223	ENSMAMG00000002795	rab15	73	45.223
ENSMAMG00000020286	-	75	43.226	ENSMAMG00000010297	rab25b	72	43.226
ENSMAMG00000020286	-	75	43.226	ENSMAMG00000012471	rab25a	72	43.226
ENSMAMG00000020286	-	68	32.432	ENSMAMG00000014747	rasl11b	62	31.507
ENSMAMG00000020286	-	76	36.306	ENSMAMG00000006024	rab22a	80	36.306
ENSMAMG00000020286	-	76	39.759	ENSMAMG00000009927	rab9b	80	39.759
ENSMAMG00000020286	-	76	34.356	ENSMAMG00000006963	RAB29	79	34.356
ENSMAMG00000020286	-	75	46.154	ENSMAMG00000020135	zgc:171927	72	46.154
ENSMAMG00000020286	-	67	33.803	ENSMAMG00000001320	si:cabz01085950.1	58	33.803
ENSMAMG00000020286	-	80	36.310	ENSMAMG00000018672	rab34a	63	36.310
ENSMAMG00000020286	-	76	44.025	ENSMAMG00000021329	RAB39B	74	44.025
ENSMAMG00000020286	-	68	31.469	ENSMAMG00000001902	nkiras1	74	31.469
ENSMAMG00000020286	-	75	49.359	ENSMAMG00000014602	rab13	78	49.359
ENSMAMG00000020286	-	86	39.106	ENSMAMG00000016207	-	81	39.106
ENSMAMG00000020286	-	76	43.312	ENSMAMG00000012573	rab5aa	72	43.312
ENSMAMG00000020286	-	75	43.590	ENSMAMG00000018306	-	77	43.590
ENSMAMG00000020286	-	83	30.114	ENSMAMG00000022707	dnajc27	63	30.114
ENSMAMG00000020286	-	75	44.516	ENSMAMG00000018533	-	71	44.516
ENSMAMG00000020286	-	69	36.364	ENSMAMG00000001748	rhebl1	77	36.364
ENSMAMG00000020286	-	75	30.573	ENSMAMG00000004106	rras	83	31.928
ENSMAMG00000020286	-	81	38.728	ENSMAMG00000019230	si:dkey-16l2.16	78	38.728
ENSMAMG00000020286	-	71	33.557	ENSMAMG00000004359	hrasb	82	34.810
ENSMAMG00000020286	-	78	39.024	ENSMAMG00000020214	rab34b	65	39.024
ENSMAMG00000020286	-	80	48.193	ENSMAMG00000011549	rab2a	78	48.193
ENSMAMG00000020286	-	75	50.641	ENSMAMG00000011973	rab30	76	50.641
ENSMAMG00000020286	-	81	39.326	ENSMAMG00000021095	si:dkey-13a21.4	86	39.326
ENSMAMG00000020286	-	77	39.634	ENSMAMG00000013538	rab9a	80	39.634
ENSMAMG00000020286	-	76	46.497	ENSMAMG00000018450	-	73	46.497
ENSMAMG00000020286	-	75	45.161	ENSMAMG00000006378	rab11bb	71	45.161
ENSMAMG00000020286	-	76	38.509	ENSMAMG00000020246	-	77	38.509
ENSMAMG00000020286	-	75	45.513	ENSMAMG00000012233	rab6bb	75	45.513
ENSMAMG00000020286	-	70	39.333	ENSMAMG00000006640	-	65	37.736
ENSMAMG00000020286	-	76	45.860	ENSMAMG00000012750	rab14	73	45.860

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000020286	-	76	89.873	ENSG00000172794	RAB37	87	89.873	Homo_sapiens
ENSMAMG00000020286	-	91	77.249	ENSACIG00000023222	-	82	77.249	Amphilophus_citrinellus
ENSMAMG00000020286	-	76	88.608	ENSCPOG00000025645	RAB37	73	88.608	Cavia_porcellus
ENSMAMG00000020286	-	76	88.608	ENSCLAG00000008913	RAB37	73	88.608	Chinchilla_lanigera
ENSMAMG00000020286	-	76	97.468	ENSCVAG00000014416	-	75	97.468	Cyprinodon_variegatus
ENSMAMG00000020286	-	77	85.000	ENSELUG00000023120	-	75	85.000	Esox_lucius
ENSMAMG00000020286	-	76	87.975	ENSFDAG00000015285	RAB37	73	87.975	Fukomys_damarensis
ENSMAMG00000020286	-	76	94.937	ENSGAFG00000014730	-	78	94.937	Gambusia_affinis
ENSMAMG00000020286	-	76	88.608	ENSHGLG00000004384	RAB37	73	88.608	Heterocephalus_glaber_female
ENSMAMG00000020286	-	76	88.608	ENSHGLG00100012557	-	73	88.608	Heterocephalus_glaber_male
ENSMAMG00000020286	-	76	96.203	ENSLBEG00000027539	-	72	96.203	Labrus_bergylta
ENSMAMG00000020286	-	76	88.608	MGP_CAROLIEiJ_G0017386	Rab37	73	88.608	Mus_caroli
ENSMAMG00000020286	-	86	81.006	ENSMUSG00000020732	Rab37	80	81.006	Mus_musculus
ENSMAMG00000020286	-	86	81.006	MGP_PahariEiJ_G0018517	Rab37	80	81.006	Mus_pahari
ENSMAMG00000020286	-	86	81.006	MGP_SPRETEiJ_G0018231	Rab37	80	81.006	Mus_spretus
ENSMAMG00000020286	-	59	92.623	ENSNBRG00000011872	-	61	92.623	Neolamprologus_brichardi
ENSMAMG00000020286	-	80	93.939	ENSORLG00000024558	-	76	87.027	Oryzias_latipes
ENSMAMG00000020286	-	79	95.092	ENSORLG00020015717	-	65	96.203	Oryzias_latipes_hni
ENSMAMG00000020286	-	76	96.203	ENSORLG00015013564	-	80	96.203	Oryzias_latipes_hsok
ENSMAMG00000020286	-	87	87.778	ENSOMEG00000018494	-	72	87.778	Oryzias_melastigma
ENSMAMG00000020286	-	76	87.975	ENSPCIG00000004450	-	72	87.975	Phascolarctos_cinereus
ENSMAMG00000020286	-	78	96.273	ENSPFOG00000006314	-	66	96.273	Poecilia_formosa
ENSMAMG00000020286	-	78	96.273	ENSPFOG00000019144	-	66	96.273	Poecilia_formosa
ENSMAMG00000020286	-	78	95.652	ENSPMEG00000002564	-	66	95.652	Poecilia_mexicana
ENSMAMG00000020286	-	78	95.652	ENSPMEG00000017161	-	66	95.652	Poecilia_mexicana
ENSMAMG00000020286	-	64	91.729	ENSPPYG00000008601	-	70	91.729	Pongo_abelii
ENSMAMG00000020286	-	76	91.139	ENSPNAG00000021675	-	73	91.139	Pygocentrus_nattereri
ENSMAMG00000020286	-	89	85.326	ENSXMAG00000021303	-	68	95.062	Xiphophorus_maculatus