EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000020339 (Gene tree)
Gene ID: 113125970
Gene Symbol: vars2
Alias: si:ch211-152p11.2
Full Name: valyl-tRNA synthetase 2%2C mitochondrial
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 60740 bases
Position: chrOOHQ01000103.1:684054-744793
Accession: 113125970
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000030158	tRNA-synt_1g	PF09334.11	4.6e-16	1	1
ENSMAMP00000030161	tRNA-synt_1g	PF09334.11	5.1e-16	1	1
ENSMAMP00000030158	Anticodon_1	PF08264.13	2.1e-36	1	1
ENSMAMP00000030161	Anticodon_1	PF08264.13	2.3e-36	1	1
ENSMAMP00000030158	tRNA-synt_1	PF00133.22	2.4e-194	1	1
ENSMAMP00000030161	tRNA-synt_1	PF00133.22	2.6e-194	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000030946	-	3872	-	ENSMAMP00000030158	1082 (aa)	XP_026155451	UPI000E463D00
ENSMAMT00000030949	-	3929	-	ENSMAMP00000030161	1101 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000020339's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000020339's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000020339	vars2	98	44.911	ENSMAMG00000003949	vars	80	47.642

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000020339	vars2	99	79.278	ENSAPOG00000007396	vars2	99	79.371	Acanthochromis_polyacanthus
ENSMAMG00000020339	vars2	97	50.615	ENSAMEG00000012997	VARS2	93	51.147	Ailuropoda_melanoleuca
ENSMAMG00000020339	vars2	99	77.593	ENSACIG00000004344	vars2	96	79.480	Amphilophus_citrinellus
ENSMAMG00000020339	vars2	99	79.556	ENSAOCG00000000476	vars2	99	79.556	Amphiprion_ocellaris
ENSMAMG00000020339	vars2	99	79.186	ENSAPEG00000008646	vars2	97	79.186	Amphiprion_percula
ENSMAMG00000020339	vars2	99	81.372	ENSATEG00000012291	vars2	99	81.279	Anabas_testudineus
ENSMAMG00000020339	vars2	96	51.050	ENSACAG00000022093	VARS2	95	51.147	Anolis_carolinensis
ENSMAMG00000020339	vars2	97	49.812	ENSANAG00000038018	VARS2	96	50.000	Aotus_nancymaae
ENSMAMG00000020339	vars2	99	78.163	ENSACLG00000018673	vars2	97	79.460	Astatotilapia_calliptera
ENSMAMG00000020339	vars2	96	69.885	ENSAMXG00000017773	vars2	95	71.138	Astyanax_mexicanus
ENSMAMG00000020339	vars2	98	50.282	ENSBTAG00000010698	VARS2	95	50.913	Bos_taurus
ENSMAMG00000020339	vars2	97	49.623	ENSCJAG00000019826	VARS2	96	50.000	Callithrix_jacchus
ENSMAMG00000020339	vars2	93	51.859	ENSCAFG00000000454	VARS2	91	52.452	Canis_familiaris
ENSMAMG00000020339	vars2	84	55.229	ENSCAFG00020019387	VARS2	90	55.902	Canis_lupus_dingo
ENSMAMG00000020339	vars2	97	50.800	ENSCHIG00000007847	VARS2	95	51.437	Capra_hircus
ENSMAMG00000020339	vars2	96	50.938	ENSTSYG00000009904	VARS2	96	51.196	Carlito_syrichta
ENSMAMG00000020339	vars2	89	50.938	ENSCAPG00000017770	VARS2	99	51.204	Cavia_aperea
ENSMAMG00000020339	vars2	98	49.719	ENSCPOG00000021834	VARS2	95	50.336	Cavia_porcellus
ENSMAMG00000020339	vars2	97	49.811	ENSCCAG00000037907	VARS2	96	50.095	Cebus_capucinus
ENSMAMG00000020339	vars2	96	50.188	ENSCATG00000032554	VARS2	96	50.429	Cercocebus_atys
ENSMAMG00000020339	vars2	97	49.811	ENSCLAG00000002889	VARS2	96	50.096	Chinchilla_lanigera
ENSMAMG00000020339	vars2	96	50.469	ENSCSAG00000008327	VARS2	96	50.907	Chlorocebus_sabaeus
ENSMAMG00000020339	vars2	91	54.002	ENSCPBG00000021502	VARS2	96	54.040	Chrysemys_picta_bellii
ENSMAMG00000020339	vars2	96	50.094	ENSCANG00000014991	VARS2	95	50.431	Colobus_angolensis_palliatus
ENSMAMG00000020339	vars2	98	50.560	ENSCGRG00001021535	Vars2	95	51.294	Cricetulus_griseus_chok1gshd
ENSMAMG00000020339	vars2	98	50.560	ENSCGRG00000014112	Vars2	95	51.294	Cricetulus_griseus_crigri
ENSMAMG00000020339	vars2	99	65.411	ENSCSEG00000015432	vars2	87	84.564	Cynoglossus_semilaevis
ENSMAMG00000020339	vars2	66	77.887	ENSCVAG00000017765	vars2	98	77.887	Cyprinodon_variegatus
ENSMAMG00000020339	vars2	98	68.466	ENSDARG00000056717	vars2	97	69.075	Danio_rerio
ENSMAMG00000020339	vars2	80	48.750	ENSDORG00000008516	Vars2	93	48.750	Dipodomys_ordii
ENSMAMG00000020339	vars2	97	44.910	ENSETEG00000014844	VARS2	95	45.072	Echinops_telfairi
ENSMAMG00000020339	vars2	96	50.144	ENSEASG00005019997	VARS2	94	53.927	Equus_asinus_asinus
ENSMAMG00000020339	vars2	96	50.623	ENSECAG00000018202	VARS2	95	50.818	Equus_caballus
ENSMAMG00000020339	vars2	64	55.882	ENSEEUG00000012591	-	62	55.882	Erinaceus_europaeus
ENSMAMG00000020339	vars2	100	68.219	ENSELUG00000017824	vars2	96	69.971	Esox_lucius
ENSMAMG00000020339	vars2	95	50.613	ENSFCAG00000010531	VARS2	95	51.252	Felis_catus
ENSMAMG00000020339	vars2	97	49.811	ENSFDAG00000017216	VARS2	95	49.952	Fukomys_damarensis
ENSMAMG00000020339	vars2	91	72.967	ENSFHEG00000013932	vars2	94	73.499	Fundulus_heteroclitus
ENSMAMG00000020339	vars2	90	71.166	ENSGMOG00000018960	vars2	99	71.166	Gadus_morhua
ENSMAMG00000020339	vars2	91	76.000	ENSGAFG00000004737	vars2	96	76.000	Gambusia_affinis
ENSMAMG00000020339	vars2	93	78.373	ENSGACG00000001464	vars2	99	78.140	Gasterosteus_aculeatus
ENSMAMG00000020339	vars2	91	54.225	ENSGAGG00000011652	VARS2	98	54.225	Gopherus_agassizii
ENSMAMG00000020339	vars2	97	49.905	ENSGGOG00000014587	VARS2	96	50.240	Gorilla_gorilla
ENSMAMG00000020339	vars2	98	75.985	ENSHBUG00000002448	vars2	97	77.220	Haplochromis_burtoni
ENSMAMG00000020339	vars2	97	49.811	ENSHGLG00000012886	VARS2	92	50.000	Heterocephalus_glaber_female
ENSMAMG00000020339	vars2	97	49.716	ENSHGLG00100016535	VARS2	96	49.904	Heterocephalus_glaber_male
ENSMAMG00000020339	vars2	68	76.119	ENSHCOG00000017907	vars2	99	75.401	Hippocampus_comes
ENSMAMG00000020339	vars2	94	70.508	ENSIPUG00000015573	Vars2	96	70.019	Ictalurus_punctatus
ENSMAMG00000020339	vars2	98	49.576	ENSSTOG00000009924	VARS2	95	50.144	Ictidomys_tridecemlineatus
ENSMAMG00000020339	vars2	98	49.533	ENSJJAG00000011144	Vars2	95	50.384	Jaculus_jaculus
ENSMAMG00000020339	vars2	100	75.802	ENSKMAG00000001393	vars2	100	76.011	Kryptolebias_marmoratus
ENSMAMG00000020339	vars2	100	73.597	ENSLBEG00000011949	vars2	99	73.229	Labrus_bergylta
ENSMAMG00000020339	vars2	51	82.098	ENSLBEG00000005480	-	81	81.884	Labrus_bergylta
ENSMAMG00000020339	vars2	96	50.284	ENSLACG00000001576	-	99	50.379	Latimeria_chalumnae
ENSMAMG00000020339	vars2	98	49.719	ENSLAFG00000015183	VARS2	95	50.191	Loxodonta_africana
ENSMAMG00000020339	vars2	96	50.000	ENSMFAG00000042367	VARS2	96	50.238	Macaca_fascicularis
ENSMAMG00000020339	vars2	96	50.094	ENSMMUG00000018609	VARS2	96	50.334	Macaca_mulatta
ENSMAMG00000020339	vars2	96	50.000	ENSMNEG00000043163	VARS2	96	50.238	Macaca_nemestrina
ENSMAMG00000020339	vars2	96	50.094	ENSMLEG00000041728	VARS2	93	50.621	Mandrillus_leucophaeus
ENSMAMG00000020339	vars2	99	78.069	ENSMZEG00005017669	vars2	97	79.364	Maylandia_zebra
ENSMAMG00000020339	vars2	98	50.613	ENSMAUG00000018946	Vars2	95	51.250	Mesocricetus_auratus
ENSMAMG00000020339	vars2	81	55.204	ENSMICG00000005365	VARS2	95	55.736	Microcebus_murinus
ENSMAMG00000020339	vars2	90	56.625	ENSMOCG00000014607	Vars2	94	57.308	Microtus_ochrogaster
ENSMAMG00000020339	vars2	99	76.204	ENSMMOG00000012122	vars2	99	76.204	Mola_mola
ENSMAMG00000020339	vars2	93	50.244	ENSMODG00000015848	VARS2	94	49.380	Monodelphis_domestica
ENSMAMG00000020339	vars2	93	82.330	ENSMALG00000009217	vars2	99	82.330	Monopterus_albus
ENSMAMG00000020339	vars2	96	51.100	MGP_CAROLIEiJ_G0021529	Vars2	97	53.541	Mus_caroli
ENSMAMG00000020339	vars2	96	50.622	ENSMUSG00000038838	Vars2	98	53.002	Mus_musculus
ENSMAMG00000020339	vars2	98	50.000	MGP_PahariEiJ_G0020523	Vars2	93	54.219	Mus_pahari
ENSMAMG00000020339	vars2	96	50.909	MGP_SPRETEiJ_G0022436	Vars2	97	53.368	Mus_spretus
ENSMAMG00000020339	vars2	95	51.042	ENSMPUG00000011643	VARS2	96	51.248	Mustela_putorius_furo
ENSMAMG00000020339	vars2	93	51.378	ENSMLUG00000002356	VARS2	88	51.552	Myotis_lucifugus
ENSMAMG00000020339	vars2	98	46.132	ENSNGAG00000020607	Vars2	95	46.908	Nannospalax_galili
ENSMAMG00000020339	vars2	63	69.876	ENSNBRG00000001624	vars2	58	69.876	Neolamprologus_brichardi
ENSMAMG00000020339	vars2	96	49.666	ENSNLEG00000005625	VARS2	93	50.097	Nomascus_leucogenys
ENSMAMG00000020339	vars2	76	55.167	ENSMEUG00000014475	VARS2	89	55.167	Notamacropus_eugenii
ENSMAMG00000020339	vars2	88	48.804	ENSOPRG00000000682	VARS2	84	52.778	Ochotona_princeps
ENSMAMG00000020339	vars2	97	50.047	ENSODEG00000017965	VARS2	95	50.337	Octodon_degus
ENSMAMG00000020339	vars2	65	84.399	ENSONIG00000004734	vars2	100	59.806	Oreochromis_niloticus
ENSMAMG00000020339	vars2	73	42.205	ENSOANG00000000398	-	92	42.205	Ornithorhynchus_anatinus
ENSMAMG00000020339	vars2	97	47.286	ENSOCUG00000021496	VARS2	61	48.148	Oryctolagus_cuniculus
ENSMAMG00000020339	vars2	94	74.581	ENSORLG00000010632	vars2	95	74.013	Oryzias_latipes
ENSMAMG00000020339	vars2	94	74.631	ENSORLG00020018584	vars2	95	74.110	Oryzias_latipes_hni
ENSMAMG00000020339	vars2	94	74.485	ENSORLG00015010408	vars2	96	73.992	Oryzias_latipes_hsok
ENSMAMG00000020339	vars2	95	74.441	ENSOMEG00000008360	vars2	95	74.277	Oryzias_melastigma
ENSMAMG00000020339	vars2	96	50.047	ENSOGAG00000006087	VARS2	93	50.336	Otolemur_garnettii
ENSMAMG00000020339	vars2	97	49.953	ENSOARG00000010844	VARS2	94	50.574	Ovis_aries
ENSMAMG00000020339	vars2	97	49.905	ENSPPAG00000041141	VARS2	96	50.144	Pan_paniscus
ENSMAMG00000020339	vars2	95	50.707	ENSPPRG00000006751	VARS2	92	51.252	Panthera_pardus
ENSMAMG00000020339	vars2	95	50.613	ENSPTIG00000017799	VARS2	96	52.083	Panthera_tigris_altaica
ENSMAMG00000020339	vars2	97	49.905	ENSPTRG00000034497	VARS2	96	50.144	Pan_troglodytes
ENSMAMG00000020339	vars2	96	50.094	ENSPANG00000018481	VARS2	95	51.738	Papio_anubis
ENSMAMG00000020339	vars2	98	66.604	ENSPKIG00000011372	vars2	95	67.502	Paramormyrops_kingsleyae
ENSMAMG00000020339	vars2	58	60.849	ENSPSIG00000006206	VARS2	92	60.620	Pelodiscus_sinensis
ENSMAMG00000020339	vars2	98	70.263	ENSPMGG00000000465	vars2	97	71.100	Periophthalmus_magnuspinnatus
ENSMAMG00000020339	vars2	96	51.003	ENSPEMG00000014691	Vars2	95	51.003	Peromyscus_maniculatus_bairdii
ENSMAMG00000020339	vars2	95	50.774	ENSPCIG00000015040	VARS2	95	50.529	Phascolarctos_cinereus
ENSMAMG00000020339	vars2	95	74.586	ENSPFOG00000017616	vars2	95	74.589	Poecilia_formosa
ENSMAMG00000020339	vars2	95	75.024	ENSPLAG00000019778	vars2	96	75.024	Poecilia_latipinna
ENSMAMG00000020339	vars2	95	74.829	ENSPMEG00000011123	vars2	96	74.831	Poecilia_mexicana
ENSMAMG00000020339	vars2	91	68.040	ENSPREG00000014998	vars2	95	67.925	Poecilia_reticulata
ENSMAMG00000020339	vars2	97	50.095	ENSPPYG00000016424	VARS2	96	50.431	Pongo_abelii
ENSMAMG00000020339	vars2	63	52.833	ENSPCAG00000006946	VARS2	78	52.833	Procavia_capensis
ENSMAMG00000020339	vars2	97	49.345	ENSPCOG00000014839	VARS2	92	49.666	Propithecus_coquereli
ENSMAMG00000020339	vars2	98	50.140	ENSPVAG00000004197	VARS2	95	50.621	Pteropus_vampyrus
ENSMAMG00000020339	vars2	87	84.906	ENSPNYG00000010314	vars2	100	84.906	Pundamilia_nyererei
ENSMAMG00000020339	vars2	96	70.633	ENSPNAG00000026793	vars2	95	70.673	Pygocentrus_nattereri
ENSMAMG00000020339	vars2	98	49.345	ENSRNOG00000000833	Vars2	95	50.144	Rattus_norvegicus
ENSMAMG00000020339	vars2	96	50.281	ENSRBIG00000032725	VARS2	96	50.716	Rhinopithecus_bieti
ENSMAMG00000020339	vars2	96	50.188	ENSRROG00000043847	VARS2	96	50.621	Rhinopithecus_roxellana
ENSMAMG00000020339	vars2	97	48.524	ENSSBOG00000033240	VARS2	94	48.596	Saimiri_boliviensis_boliviensis
ENSMAMG00000020339	vars2	99	49.535	ENSSHAG00000009307	VARS2	95	50.818	Sarcophilus_harrisii
ENSMAMG00000020339	vars2	97	67.717	ENSSFOG00015016187	vars2	95	67.816	Scleropages_formosus
ENSMAMG00000020339	vars2	99	78.035	ENSSMAG00000020842	vars2	99	78.035	Scophthalmus_maximus
ENSMAMG00000020339	vars2	99	83.225	ENSSDUG00000011598	vars2	99	83.225	Seriola_dumerili
ENSMAMG00000020339	vars2	99	80.684	ENSSLDG00000015492	vars2	99	80.684	Seriola_lalandi_dorsalis
ENSMAMG00000020339	vars2	50	57.037	ENSSARG00000003786	-	60	57.037	Sorex_araneus
ENSMAMG00000020339	vars2	79	57.913	ENSSPUG00000014700	VARS2	87	57.913	Sphenodon_punctatus
ENSMAMG00000020339	vars2	99	76.204	ENSSPAG00000004654	vars2	100	75.463	Stegastes_partitus
ENSMAMG00000020339	vars2	98	50.936	ENSSSCG00000001384	VARS2	95	53.285	Sus_scrofa
ENSMAMG00000020339	vars2	99	71.255	ENSTRUG00000005264	vars2	99	71.810	Takifugu_rubripes
ENSMAMG00000020339	vars2	98	68.550	ENSTNIG00000005916	vars2	95	69.682	Tetraodon_nigroviridis
ENSMAMG00000020339	vars2	78	50.383	ENSTTRG00000012243	VARS2	78	52.809	Tursiops_truncatus
ENSMAMG00000020339	vars2	98	50.798	ENSUAMG00000026124	VARS2	99	52.321	Ursus_americanus
ENSMAMG00000020339	vars2	98	50.752	ENSUMAG00000019894	VARS2	96	51.147	Ursus_maritimus
ENSMAMG00000020339	vars2	97	50.516	ENSVVUG00000010754	VARS2	90	51.056	Vulpes_vulpes
ENSMAMG00000020339	vars2	89	52.049	ENSXETG00000003036	vars2	99	52.049	Xenopus_tropicalis
ENSMAMG00000020339	vars2	95	76.339	ENSXCOG00000003455	vars2	96	77.129	Xiphophorus_couchianus
ENSMAMG00000020339	vars2	98	76.682	ENSXMAG00000013523	vars2	96	77.457	Xiphophorus_maculatus