EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000020343 (Gene tree)
Gene ID: 113135613
Gene Symbol: tdrkh
Alias: TDRD2|zgc:113056
Full Name: tudor and KH domain containing
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 14869 bases
Position: chrOOHQ01000019.1:1749745-1764613
Accession: 113135613
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000030193	KH_1	PF00013.29	7.8e-19	1	1
ENSMAMP00000030178	KH_1	PF00013.29	8e-19	1	1
ENSMAMP00000030188	KH_1	PF00013.29	8e-19	1	1
ENSMAMP00000030193	TUDOR	PF00567.24	2.8e-25	1	1
ENSMAMP00000030178	TUDOR	PF00567.24	3e-25	1	1
ENSMAMP00000030188	TUDOR	PF00567.24	3e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000030977	-	4650	-	ENSMAMP00000030188	550 (aa)	XP_026171579	UPI000E45A8B1
ENSMAMT00000030966	-	4953	-	ENSMAMP00000030178	550 (aa)	XP_026171579	UPI000E45A8B1
ENSMAMT00000030982	-	2079	-	ENSMAMP00000030193	531 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000020343's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000020343's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000020343	tdrkh	100	79.749	ENSAPOG00000012653	tdrkh	100	79.749	Acanthochromis_polyacanthus
ENSMAMG00000020343	tdrkh	97	75.933	ENSACIG00000010318	tdrkh	98	75.933	Amphilophus_citrinellus
ENSMAMG00000020343	tdrkh	100	80.645	ENSAOCG00000020623	tdrkh	100	80.645	Amphiprion_ocellaris
ENSMAMG00000020343	tdrkh	100	80.824	ENSAPEG00000018388	tdrkh	100	80.824	Amphiprion_percula
ENSMAMG00000020343	tdrkh	100	82.491	ENSATEG00000023809	tdrkh	100	82.491	Anabas_testudineus
ENSMAMG00000020343	tdrkh	100	74.549	ENSACLG00000003017	tdrkh	100	74.549	Astatotilapia_calliptera
ENSMAMG00000020343	tdrkh	99	61.470	ENSAMXG00000011664	tdrkh	94	61.470	Astyanax_mexicanus
ENSMAMG00000020343	tdrkh	100	68.165	ENSCSEG00000002894	tdrkh	99	68.165	Cynoglossus_semilaevis
ENSMAMG00000020343	tdrkh	62	78.641	ENSCVAG00000020347	tdrkh	79	78.641	Cyprinodon_variegatus
ENSMAMG00000020343	tdrkh	99	62.075	ENSDARG00000053474	tdrkh	100	56.944	Danio_rerio
ENSMAMG00000020343	tdrkh	100	64.349	ENSELUG00000024537	tdrkh	94	64.349	Esox_lucius
ENSMAMG00000020343	tdrkh	100	74.141	ENSFHEG00000003544	tdrkh	100	74.141	Fundulus_heteroclitus
ENSMAMG00000020343	tdrkh	100	64.247	ENSGMOG00000009304	tdrkh	94	64.247	Gadus_morhua
ENSMAMG00000020343	tdrkh	100	70.524	ENSGAFG00000010754	tdrkh	100	70.524	Gambusia_affinis
ENSMAMG00000020343	tdrkh	100	72.093	ENSGACG00000015258	tdrkh	94	72.093	Gasterosteus_aculeatus
ENSMAMG00000020343	tdrkh	100	74.549	ENSHBUG00000017609	tdrkh	100	74.549	Haplochromis_burtoni
ENSMAMG00000020343	tdrkh	99	62.342	ENSIPUG00000009673	tdrkh	99	62.342	Ictalurus_punctatus
ENSMAMG00000020343	tdrkh	100	72.482	ENSKMAG00000016638	tdrkh	93	73.201	Kryptolebias_marmoratus
ENSMAMG00000020343	tdrkh	100	77.477	ENSLBEG00000027323	tdrkh	97	77.477	Labrus_bergylta
ENSMAMG00000020343	tdrkh	99	50.173	ENSLOCG00000011381	tdrkh	99	50.173	Lepisosteus_oculatus
ENSMAMG00000020343	tdrkh	100	74.549	ENSMZEG00005006755	tdrkh	100	74.549	Maylandia_zebra
ENSMAMG00000020343	tdrkh	97	73.371	ENSMMOG00000020663	tdrkh	90	73.371	Mola_mola
ENSMAMG00000020343	tdrkh	100	80.289	ENSMALG00000015401	tdrkh	100	80.289	Monopterus_albus
ENSMAMG00000020343	tdrkh	100	72.022	ENSNBRG00000023815	tdrkh	100	72.022	Neolamprologus_brichardi
ENSMAMG00000020343	tdrkh	100	69.801	ENSORLG00000029204	tdrkh	99	69.801	Oryzias_latipes
ENSMAMG00000020343	tdrkh	97	69.246	ENSORLG00020016168	tdrkh	99	68.302	Oryzias_latipes_hni
ENSMAMG00000020343	tdrkh	100	66.184	ENSORLG00015014094	tdrkh	99	66.184	Oryzias_latipes_hsok
ENSMAMG00000020343	tdrkh	100	71.248	ENSOMEG00000015063	tdrkh	92	71.248	Oryzias_melastigma
ENSMAMG00000020343	tdrkh	100	57.424	ENSPKIG00000017597	tdrkh	100	57.424	Paramormyrops_kingsleyae
ENSMAMG00000020343	tdrkh	100	66.369	ENSPMGG00000019362	tdrkh	100	66.726	Periophthalmus_magnuspinnatus
ENSMAMG00000020343	tdrkh	100	70.705	ENSPFOG00000013032	tdrkh	94	70.705	Poecilia_formosa
ENSMAMG00000020343	tdrkh	100	70.886	ENSPLAG00000004193	tdrkh	100	70.886	Poecilia_latipinna
ENSMAMG00000020343	tdrkh	100	70.705	ENSPMEG00000016502	tdrkh	100	70.705	Poecilia_mexicana
ENSMAMG00000020343	tdrkh	100	69.259	ENSPREG00000004213	tdrkh	94	69.259	Poecilia_reticulata
ENSMAMG00000020343	tdrkh	97	74.067	ENSPNYG00000022818	tdrkh	97	74.067	Pundamilia_nyererei
ENSMAMG00000020343	tdrkh	99	61.041	ENSPNAG00000008783	tdrkh	94	61.041	Pygocentrus_nattereri
ENSMAMG00000020343	tdrkh	100	56.115	ENSSFOG00015001048	tdrkh	100	56.250	Scleropages_formosus
ENSMAMG00000020343	tdrkh	100	78.136	ENSSMAG00000001532	tdrkh	100	78.136	Scophthalmus_maximus
ENSMAMG00000020343	tdrkh	100	78.546	ENSSDUG00000013393	tdrkh	100	78.723	Seriola_dumerili
ENSMAMG00000020343	tdrkh	100	78.723	ENSSLDG00000017418	tdrkh	100	78.901	Seriola_lalandi_dorsalis
ENSMAMG00000020343	tdrkh	100	82.079	ENSSPAG00000006435	tdrkh	95	82.079	Stegastes_partitus
ENSMAMG00000020343	tdrkh	97	71.589	ENSTRUG00000006644	tdrkh	97	71.589	Takifugu_rubripes
ENSMAMG00000020343	tdrkh	99	68.402	ENSTNIG00000003157	tdrkh	99	68.402	Tetraodon_nigroviridis
ENSMAMG00000020343	tdrkh	81	80.000	ENSXCOG00000016972	tdrkh	98	80.000	Xiphophorus_couchianus
ENSMAMG00000020343	tdrkh	100	68.897	ENSXMAG00000014756	tdrkh	100	68.897	Xiphophorus_maculatus