EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000020364 (Gene tree)
Gene ID: 113144539
Gene Symbol: cstf2
Alias: CstF-64|fb11e07|wu:fb11e07|zgc:77730
Full Name: cleavage stimulation factor%2C 3' pre-RNA%2C subunit 2
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 13683 bases
Position: chrOOHQ01000077.1:9136768-9150450
Accession: ZDB-GENE-031118-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000030196	RRM_1	PF00076.22	2.9e-23	1	1
ENSMAMP00000030197	RRM_1	PF00076.22	2.9e-23	1	1
ENSMAMP00000030194	RRM_1	PF00076.22	3e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000030983	-	6766	-	ENSMAMP00000030194	498 (aa)	-	-
ENSMAMT00000030986	-	2012	-	ENSMAMP00000030197	478 (aa)	-	-
ENSMAMT00000030985	-	6706	-	ENSMAMP00000030196	478 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000020364's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000020364's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000020364	cstf2	96	58.834	ENSG00000101811	CSTF2	81	92.308	Homo_sapiens
ENSMAMG00000020364	cstf2	96	90.249	ENSAPOG00000005630	cstf2	94	90.456	Acanthochromis_polyacanthus
ENSMAMG00000020364	cstf2	96	57.699	ENSAMEG00000002082	CSTF2	82	79.828	Ailuropoda_melanoleuca
ENSMAMG00000020364	cstf2	96	86.052	ENSACIG00000012852	cstf2	94	85.408	Amphilophus_citrinellus
ENSMAMG00000020364	cstf2	96	91.250	ENSAOCG00000020905	cstf2	94	91.250	Amphiprion_ocellaris
ENSMAMG00000020364	cstf2	96	91.458	ENSAPEG00000006526	cstf2	94	91.458	Amphiprion_percula
ENSMAMG00000020364	cstf2	96	89.300	ENSATEG00000018186	cstf2	94	89.300	Anabas_testudineus
ENSMAMG00000020364	cstf2	95	59.083	ENSAPLG00000007255	CSTF2	82	84.681	Anas_platyrhynchos
ENSMAMG00000020364	cstf2	96	73.684	ENSANAG00000022342	CSTF2	78	79.399	Aotus_nancymaae
ENSMAMG00000020364	cstf2	96	89.419	ENSACLG00000000779	cstf2	91	90.871	Astatotilapia_calliptera
ENSMAMG00000020364	cstf2	92	89.130	ENSAMXG00000021477	cstf2	92	96.154	Astyanax_mexicanus
ENSMAMG00000020364	cstf2	96	59.331	ENSBTAG00000003547	CSTF2	82	79.828	Bos_taurus
ENSMAMG00000020364	cstf2	96	60.986	ENSCJAG00000004422	CSTF2	97	56.574	Callithrix_jacchus
ENSMAMG00000020364	cstf2	96	59.717	ENSCAFG00000017551	CSTF2	97	58.025	Canis_familiaris
ENSMAMG00000020364	cstf2	96	74.809	ENSCAFG00020007619	CSTF2	82	79.828	Canis_lupus_dingo
ENSMAMG00000020364	cstf2	96	59.155	ENSCHIG00000016994	CSTF2	82	79.828	Capra_hircus
ENSMAMG00000020364	cstf2	96	58.657	ENSTSYG00000006529	CSTF2	82	79.399	Carlito_syrichta
ENSMAMG00000020364	cstf2	96	59.823	ENSCPOG00000015255	CSTF2	84	92.157	Cavia_porcellus
ENSMAMG00000020364	cstf2	96	59.781	ENSCCAG00000032975	CSTF2	97	57.982	Cebus_capucinus
ENSMAMG00000020364	cstf2	96	59.963	ENSCATG00000022835	CSTF2	82	79.399	Cercocebus_atys
ENSMAMG00000020364	cstf2	96	59.266	ENSCLAG00000001904	CSTF2	85	90.385	Chinchilla_lanigera
ENSMAMG00000020364	cstf2	96	58.291	ENSCSAG00000010360	CSTF2	82	79.399	Chlorocebus_sabaeus
ENSMAMG00000020364	cstf2	96	66.348	ENSCPBG00000014293	CSTF2	90	66.667	Chrysemys_picta_bellii
ENSMAMG00000020364	cstf2	96	59.963	ENSCANG00000030612	CSTF2	82	79.399	Colobus_angolensis_palliatus
ENSMAMG00000020364	cstf2	96	58.377	ENSCGRG00001023023	Cstf2	85	80.519	Cricetulus_griseus_chok1gshd
ENSMAMG00000020364	cstf2	96	60.289	ENSCGRG00000003897	Cstf2	97	60.326	Cricetulus_griseus_crigri
ENSMAMG00000020364	cstf2	96	86.853	ENSCVAG00000005731	cstf2	94	87.397	Cyprinodon_variegatus
ENSMAMG00000020364	cstf2	96	70.784	ENSDARG00000090788	cstf2	91	95.833	Danio_rerio
ENSMAMG00000020364	cstf2	96	59.298	ENSDORG00000007195	Cstf2	83	92.715	Dipodomys_ordii
ENSMAMG00000020364	cstf2	71	83.929	ENSETEG00000004931	CSTF2	62	85.455	Echinops_telfairi
ENSMAMG00000020364	cstf2	96	57.949	ENSEASG00005001216	CSTF2	82	79.399	Equus_asinus_asinus
ENSMAMG00000020364	cstf2	96	57.949	ENSECAG00000009325	CSTF2	82	79.399	Equus_caballus
ENSMAMG00000020364	cstf2	96	59.436	ENSFCAG00000007000	CSTF2	82	79.828	Felis_catus
ENSMAMG00000020364	cstf2	90	57.319	ENSFALG00000003859	CSTF2	84	82.857	Ficedula_albicollis
ENSMAMG00000020364	cstf2	96	73.551	ENSFDAG00000002416	CSTF2	85	80.258	Fukomys_damarensis
ENSMAMG00000020364	cstf2	98	84.058	ENSFHEG00000017065	cstf2	93	84.095	Fundulus_heteroclitus
ENSMAMG00000020364	cstf2	96	75.375	ENSGMOG00000005145	cstf2	97	76.709	Gadus_morhua
ENSMAMG00000020364	cstf2	96	59.894	ENSGALG00000006760	CSTF2	97	60.924	Gallus_gallus
ENSMAMG00000020364	cstf2	96	86.141	ENSGAFG00000020027	cstf2	94	86.567	Gambusia_affinis
ENSMAMG00000020364	cstf2	96	81.038	ENSGACG00000017326	cstf2	95	81.836	Gasterosteus_aculeatus
ENSMAMG00000020364	cstf2	96	57.956	ENSGAGG00000006037	CSTF2	86	83.613	Gopherus_agassizii
ENSMAMG00000020364	cstf2	96	59.963	ENSGGOG00000022267	CSTF2	82	79.399	Gorilla_gorilla
ENSMAMG00000020364	cstf2	96	89.463	ENSHBUG00000016183	cstf2	91	90.909	Haplochromis_burtoni
ENSMAMG00000020364	cstf2	96	59.115	ENSHGLG00000000659	-	86	88.889	Heterocephalus_glaber_female
ENSMAMG00000020364	cstf2	96	59.115	ENSHGLG00100001130	-	86	88.889	Heterocephalus_glaber_male
ENSMAMG00000020364	cstf2	96	84.615	ENSHCOG00000005157	cstf2	94	85.652	Hippocampus_comes
ENSMAMG00000020364	cstf2	96	68.371	ENSIPUG00000017839	cstf2	95	65.089	Ictalurus_punctatus
ENSMAMG00000020364	cstf2	96	59.750	ENSSTOG00000023445	CSTF2	85	90.385	Ictidomys_tridecemlineatus
ENSMAMG00000020364	cstf2	96	59.147	ENSJJAG00000020507	Cstf2	85	90.385	Jaculus_jaculus
ENSMAMG00000020364	cstf2	96	86.752	ENSKMAG00000001068	cstf2	94	88.462	Kryptolebias_marmoratus
ENSMAMG00000020364	cstf2	65	88.235	ENSLBEG00000028720	cstf2	91	88.235	Labrus_bergylta
ENSMAMG00000020364	cstf2	96	60.445	ENSLACG00000015927	CSTF2	83	86.957	Latimeria_chalumnae
ENSMAMG00000020364	cstf2	95	84.615	ENSLOCG00000015300	cstf2	81	84.615	Lepisosteus_oculatus
ENSMAMG00000020364	cstf2	96	57.555	ENSLAFG00000000474	CSTF2	82	80.435	Loxodonta_africana
ENSMAMG00000020364	cstf2	96	59.963	ENSMFAG00000043888	CSTF2	82	79.399	Macaca_fascicularis
ENSMAMG00000020364	cstf2	96	59.963	ENSMMUG00000013008	CSTF2	82	79.399	Macaca_mulatta
ENSMAMG00000020364	cstf2	96	59.963	ENSMNEG00000041824	CSTF2	82	79.399	Macaca_nemestrina
ENSMAMG00000020364	cstf2	96	59.963	ENSMLEG00000036870	CSTF2	82	79.399	Mandrillus_leucophaeus
ENSMAMG00000020364	cstf2	96	89.419	ENSMZEG00005007200	cstf2	94	90.871	Maylandia_zebra
ENSMAMG00000020364	cstf2	92	69.620	ENSMGAG00000004139	CSTF2	99	58.599	Meleagris_gallopavo
ENSMAMG00000020364	cstf2	98	56.197	ENSMAUG00000000965	Cstf2	99	56.295	Mesocricetus_auratus
ENSMAMG00000020364	cstf2	96	74.275	ENSMICG00000014121	CSTF2	82	80.687	Microcebus_murinus
ENSMAMG00000020364	cstf2	96	57.491	ENSMOCG00000008081	Cstf2	97	57.143	Microtus_ochrogaster
ENSMAMG00000020364	cstf2	97	75.884	ENSMMOG00000000538	cstf2	94	77.131	Mola_mola
ENSMAMG00000020364	cstf2	96	58.773	ENSMODG00000011785	CSTF2	97	58.733	Monodelphis_domestica
ENSMAMG00000020364	cstf2	95	73.507	MGP_CAROLIEiJ_G0033383	Cstf2	85	91.026	Mus_caroli
ENSMAMG00000020364	cstf2	96	58.608	ENSMUSG00000031256	Cstf2	85	91.026	Mus_musculus
ENSMAMG00000020364	cstf2	95	73.507	MGP_PahariEiJ_G0031923	Cstf2	78	81.116	Mus_pahari
ENSMAMG00000020364	cstf2	95	73.507	MGP_SPRETEiJ_G0034548	Cstf2	85	91.026	Mus_spretus
ENSMAMG00000020364	cstf2	96	74.427	ENSMPUG00000002339	CSTF2	78	79.828	Mustela_putorius_furo
ENSMAMG00000020364	cstf2	93	77.419	ENSMLUG00000004598	CSTF2	76	80.342	Myotis_lucifugus
ENSMAMG00000020364	cstf2	96	59.545	ENSNGAG00000021985	Cstf2	97	58.230	Nannospalax_galili
ENSMAMG00000020364	cstf2	95	81.646	ENSNBRG00000021694	cstf2	100	83.755	Neolamprologus_brichardi
ENSMAMG00000020364	cstf2	96	59.963	ENSNLEG00000007510	CSTF2	82	79.399	Nomascus_leucogenys
ENSMAMG00000020364	cstf2	89	59.922	ENSMEUG00000014025	-	99	59.687	Notamacropus_eugenii
ENSMAMG00000020364	cstf2	76	67.327	ENSMEUG00000011186	-	97	60.623	Notamacropus_eugenii
ENSMAMG00000020364	cstf2	96	60.436	ENSMEUG00000007875	-	97	59.675	Notamacropus_eugenii
ENSMAMG00000020364	cstf2	76	91.613	ENSOPRG00000003106	CSTF2	79	82.609	Ochotona_princeps
ENSMAMG00000020364	cstf2	92	94.017	ENSONIG00000002631	cstf2	80	94.043	Oreochromis_niloticus
ENSMAMG00000020364	cstf2	91	85.714	ENSOANG00000004208	CSTF2	84	87.273	Ornithorhynchus_anatinus
ENSMAMG00000020364	cstf2	96	58.627	ENSOCUG00000010468	CSTF2	97	56.050	Oryctolagus_cuniculus
ENSMAMG00000020364	cstf2	96	86.667	ENSORLG00000001380	cstf2	94	86.882	Oryzias_latipes
ENSMAMG00000020364	cstf2	96	86.882	ENSORLG00020021917	cstf2	94	87.097	Oryzias_latipes_hni
ENSMAMG00000020364	cstf2	96	86.882	ENSORLG00015011996	cstf2	94	87.097	Oryzias_latipes_hsok
ENSMAMG00000020364	cstf2	96	87.794	ENSOMEG00000015507	cstf2	94	88.651	Oryzias_melastigma
ENSMAMG00000020364	cstf2	96	74.525	ENSOGAG00000011192	CSTF2	78	79.060	Otolemur_garnettii
ENSMAMG00000020364	cstf2	96	59.155	ENSOARG00000001022	CSTF2	82	79.828	Ovis_aries
ENSMAMG00000020364	cstf2	96	59.963	ENSPPAG00000031804	CSTF2	82	79.399	Pan_paniscus
ENSMAMG00000020364	cstf2	96	59.436	ENSPPRG00000022492	CSTF2	82	79.828	Panthera_pardus
ENSMAMG00000020364	cstf2	96	59.083	ENSPTIG00000009922	CSTF2	82	78.970	Panthera_tigris_altaica
ENSMAMG00000020364	cstf2	96	59.963	ENSPTRG00000022090	CSTF2	82	79.399	Pan_troglodytes
ENSMAMG00000020364	cstf2	95	74.809	ENSPANG00000002303	CSTF2	82	79.399	Papio_anubis
ENSMAMG00000020364	cstf2	96	72.349	ENSPKIG00000005033	cstf2	90	71.843	Paramormyrops_kingsleyae
ENSMAMG00000020364	cstf2	96	89.783	ENSPMGG00000006534	cstf2	94	89.783	Periophthalmus_magnuspinnatus
ENSMAMG00000020364	cstf2	96	56.920	ENSPEMG00000019415	Cstf2	84	80.519	Peromyscus_maniculatus_bairdii
ENSMAMG00000020364	cstf2	95	60.457	ENSPCIG00000002989	CSTF2	82	85.903	Phascolarctos_cinereus
ENSMAMG00000020364	cstf2	96	84.760	ENSPLAG00000011176	cstf2	94	85.386	Poecilia_latipinna
ENSMAMG00000020364	cstf2	96	84.696	ENSPMEG00000017743	cstf2	94	85.535	Poecilia_mexicana
ENSMAMG00000020364	cstf2	64	90.031	ENSPREG00000011481	cstf2	95	80.835	Poecilia_reticulata
ENSMAMG00000020364	cstf2	96	58.291	ENSPPYG00000020541	CSTF2	82	79.399	Pongo_abelii
ENSMAMG00000020364	cstf2	96	59.636	ENSPCOG00000027744	CSTF2	97	57.904	Propithecus_coquereli
ENSMAMG00000020364	cstf2	95	48.479	ENSPVAG00000008342	CSTF2	99	40.754	Pteropus_vampyrus
ENSMAMG00000020364	cstf2	96	82.600	ENSPNYG00000010852	cstf2	91	88.710	Pundamilia_nyererei
ENSMAMG00000020364	cstf2	96	70.881	ENSPNAG00000018887	cstf2	95	70.058	Pygocentrus_nattereri
ENSMAMG00000020364	cstf2	96	58.087	ENSRNOG00000048025	Cstf2	78	81.116	Rattus_norvegicus
ENSMAMG00000020364	cstf2	96	59.926	ENSRBIG00000030745	CSTF2	97	58.118	Rhinopithecus_bieti
ENSMAMG00000020364	cstf2	96	59.963	ENSRROG00000045042	CSTF2	82	79.399	Rhinopithecus_roxellana
ENSMAMG00000020364	cstf2	96	73.684	ENSSBOG00000021649	CSTF2	78	79.399	Saimiri_boliviensis_boliviensis
ENSMAMG00000020364	cstf2	86	83.673	ENSSHAG00000003681	CSTF2	77	85.714	Sarcophilus_harrisii
ENSMAMG00000020364	cstf2	96	72.475	ENSSFOG00015006348	cstf2	95	71.968	Scleropages_formosus
ENSMAMG00000020364	cstf2	96	90.208	ENSSMAG00000013463	cstf2	94	91.458	Scophthalmus_maximus
ENSMAMG00000020364	cstf2	96	60.000	ENSSPUG00000005288	-	50	84.483	Sphenodon_punctatus
ENSMAMG00000020364	cstf2	96	61.317	ENSSSCG00000012486	CSTF2	82	79.399	Sus_scrofa
ENSMAMG00000020364	cstf2	96	58.651	ENSTGUG00000002253	CSTF2	85	83.613	Taeniopygia_guttata
ENSMAMG00000020364	cstf2	96	83.745	ENSTNIG00000016860	cstf2	96	83.539	Tetraodon_nigroviridis
ENSMAMG00000020364	cstf2	56	98.780	ENSTBEG00000010029	-	64	98.780	Tupaia_belangeri
ENSMAMG00000020364	cstf2	96	74.427	ENSUAMG00000026605	CSTF2	82	79.828	Ursus_americanus
ENSMAMG00000020364	cstf2	95	74.046	ENSUMAG00000012417	CSTF2	92	79.399	Ursus_maritimus
ENSMAMG00000020364	cstf2	74	68.882	ENSVPAG00000006466	CSTF2	65	66.061	Vicugna_pacos
ENSMAMG00000020364	cstf2	96	59.717	ENSVVUG00000004717	CSTF2	97	58.025	Vulpes_vulpes
ENSMAMG00000020364	cstf2	88	80.303	ENSXETG00000009642	cstf2	84	81.538	Xenopus_tropicalis
ENSMAMG00000020364	cstf2	96	70.406	ENSXCOG00000016436	cstf2	90	94.545	Xiphophorus_couchianus
ENSMAMG00000020364	cstf2	64	89.375	ENSXMAG00000013524	cstf2	95	81.731	Xiphophorus_maculatus