EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000020403 (Gene tree)
Gene ID: -
Gene Symbol: rnf17
Alias: TDRD4|im:7147535|wu:fj98c04
Full Name: ring finger protein 17
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 15461 bases
Position: chrOOHQ01000093.1:21430173-21445633
Accession: ZDB-GENE-030131-6451
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000030278	TUDOR	PF00567.24	2.7e-68	1	5
ENSMAMP00000030278	TUDOR	PF00567.24	2.7e-68	2	5
ENSMAMP00000030278	TUDOR	PF00567.24	2.7e-68	3	5
ENSMAMP00000030278	TUDOR	PF00567.24	2.7e-68	4	5
ENSMAMP00000030278	TUDOR	PF00567.24	2.7e-68	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000031067	-	3681	-	ENSMAMP00000030278	1226 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000020403's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000020403's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000020403	rnf17	62	34.109	ENSMAMG00000007725	tdrd6	60	34.109

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000020403	rnf17	87	33.663	ENSG00000132972	RNF17	99	35.294	Homo_sapiens
ENSMAMG00000020403	rnf17	92	61.050	ENSAPOG00000017034	rnf17	87	61.065	Acanthochromis_polyacanthus
ENSMAMG00000020403	rnf17	87	33.306	ENSAMEG00000017340	RNF17	74	33.278	Ailuropoda_melanoleuca
ENSMAMG00000020403	rnf17	99	63.328	ENSAOCG00000018283	rnf17	87	63.328	Amphiprion_ocellaris
ENSMAMG00000020403	rnf17	99	62.478	ENSAPEG00000022338	rnf17	94	62.578	Amphiprion_percula
ENSMAMG00000020403	rnf17	91	63.492	ENSATEG00000002067	rnf17	91	63.492	Anabas_testudineus
ENSMAMG00000020403	rnf17	87	31.950	ENSAPLG00000003969	RNF17	83	31.950	Anas_platyrhynchos
ENSMAMG00000020403	rnf17	87	34.028	ENSACAG00000001418	RNF17	75	34.028	Anolis_carolinensis
ENSMAMG00000020403	rnf17	78	34.595	ENSANAG00000029969	RNF17	95	31.579	Aotus_nancymaae
ENSMAMG00000020403	rnf17	98	65.432	ENSACLG00000018279	rnf17	87	65.432	Astatotilapia_calliptera
ENSMAMG00000020403	rnf17	95	47.286	ENSAMXG00000011002	rnf17	90	46.831	Astyanax_mexicanus
ENSMAMG00000020403	rnf17	87	33.969	ENSCJAG00000018937	RNF17	99	35.464	Callithrix_jacchus
ENSMAMG00000020403	rnf17	85	33.705	ENSCAFG00000007418	RNF17	78	33.475	Canis_familiaris
ENSMAMG00000020403	rnf17	86	33.911	ENSCHIG00000026716	RNF17	99	34.933	Capra_hircus
ENSMAMG00000020403	rnf17	87	33.663	ENSTSYG00000000365	RNF17	99	34.586	Carlito_syrichta
ENSMAMG00000020403	rnf17	86	33.609	ENSCCAG00000026725	RNF17	99	34.691	Cebus_capucinus
ENSMAMG00000020403	rnf17	87	33.745	ENSCATG00000040352	RNF17	99	34.992	Cercocebus_atys
ENSMAMG00000020403	rnf17	86	34.219	ENSCLAG00000004127	RNF17	74	34.302	Chinchilla_lanigera
ENSMAMG00000020403	rnf17	87	33.745	ENSCSAG00000018019	RNF17	74	33.745	Chlorocebus_sabaeus
ENSMAMG00000020403	rnf17	86	34.197	ENSCPBG00000020920	RNF17	77	34.233	Chrysemys_picta_bellii
ENSMAMG00000020403	rnf17	86	33.416	ENSCANG00000032927	RNF17	99	34.992	Colobus_angolensis_palliatus
ENSMAMG00000020403	rnf17	86	33.639	ENSCGRG00001022658	Rnf17	73	33.639	Cricetulus_griseus_chok1gshd
ENSMAMG00000020403	rnf17	86	33.639	ENSCGRG00000009924	Rnf17	73	33.639	Cricetulus_griseus_crigri
ENSMAMG00000020403	rnf17	99	57.831	ENSCSEG00000008626	rnf17	92	56.720	Cynoglossus_semilaevis
ENSMAMG00000020403	rnf17	92	50.478	ENSCVAG00000017008	rnf17	99	50.478	Cyprinodon_variegatus
ENSMAMG00000020403	rnf17	94	49.425	ENSDARG00000056387	rnf17	80	49.425	Danio_rerio
ENSMAMG00000020403	rnf17	86	33.333	ENSDNOG00000006115	RNF17	72	33.333	Dasypus_novemcinctus
ENSMAMG00000020403	rnf17	86	33.693	ENSECAG00000017152	RNF17	72	33.693	Equus_caballus
ENSMAMG00000020403	rnf17	67	34.632	ENSEEUG00000000332	RNF17	61	34.632	Erinaceus_europaeus
ENSMAMG00000020403	rnf17	96	78.788	ENSELUG00000005626	rnf17	81	78.788	Esox_lucius
ENSMAMG00000020403	rnf17	86	34.213	ENSFCAG00000004914	RNF17	99	35.188	Felis_catus
ENSMAMG00000020403	rnf17	87	33.222	ENSFALG00000008766	RNF17	79	33.222	Ficedula_albicollis
ENSMAMG00000020403	rnf17	87	33.056	ENSFDAG00000017857	RNF17	72	33.056	Fukomys_damarensis
ENSMAMG00000020403	rnf17	98	57.653	ENSFHEG00000014822	rnf17	86	57.653	Fundulus_heteroclitus
ENSMAMG00000020403	rnf17	99	57.031	ENSGAFG00000004463	rnf17	99	57.132	Gambusia_affinis
ENSMAMG00000020403	rnf17	56	58.317	ENSGACG00000001340	-	100	58.317	Gasterosteus_aculeatus
ENSMAMG00000020403	rnf17	75	33.171	ENSGAGG00000016999	RNF17	67	33.171	Gopherus_agassizii
ENSMAMG00000020403	rnf17	87	33.746	ENSGGOG00000014491	RNF17	99	35.143	Gorilla_gorilla
ENSMAMG00000020403	rnf17	98	67.901	ENSHBUG00000003554	rnf17	87	67.901	Haplochromis_burtoni
ENSMAMG00000020403	rnf17	87	33.167	ENSHGLG00000007270	RNF17	73	33.167	Heterocephalus_glaber_female
ENSMAMG00000020403	rnf17	87	33.250	ENSHGLG00100017393	RNF17	74	33.250	Heterocephalus_glaber_male
ENSMAMG00000020403	rnf17	99	52.083	ENSHCOG00000017676	rnf17	99	52.083	Hippocampus_comes
ENSMAMG00000020403	rnf17	99	48.325	ENSIPUG00000001087	rnf17	92	48.327	Ictalurus_punctatus
ENSMAMG00000020403	rnf17	86	33.638	ENSJJAG00000016584	Rnf17	73	33.638	Jaculus_jaculus
ENSMAMG00000020403	rnf17	99	65.432	ENSKMAG00000013403	rnf17	86	65.432	Kryptolebias_marmoratus
ENSMAMG00000020403	rnf17	89	63.375	ENSLBEG00000014910	rnf17	84	63.567	Labrus_bergylta
ENSMAMG00000020403	rnf17	71	35.562	ENSLACG00000000323	RNF17	86	35.562	Latimeria_chalumnae
ENSMAMG00000020403	rnf17	92	41.818	ENSLOCG00000010768	rnf17	86	41.818	Lepisosteus_oculatus
ENSMAMG00000020403	rnf17	87	33.663	ENSMFAG00000032388	RNF17	99	35.143	Macaca_fascicularis
ENSMAMG00000020403	rnf17	87	33.580	ENSMMUG00000014610	RNF17	99	34.992	Macaca_mulatta
ENSMAMG00000020403	rnf17	87	33.745	ENSMNEG00000011234	RNF17	99	35.606	Macaca_nemestrina
ENSMAMG00000020403	rnf17	87	33.747	ENSMLEG00000030227	RNF17	78	33.333	Mandrillus_leucophaeus
ENSMAMG00000020403	rnf17	98	65.432	ENSMZEG00005019166	rnf17	87	65.432	Maylandia_zebra
ENSMAMG00000020403	rnf17	87	30.661	ENSMGAG00000015138	RNF17	96	30.661	Meleagris_gallopavo
ENSMAMG00000020403	rnf17	87	33.921	ENSMAUG00000004788	Rnf17	72	34.346	Mesocricetus_auratus
ENSMAMG00000020403	rnf17	87	33.582	ENSMICG00000010364	RNF17	97	34.251	Microcebus_murinus
ENSMAMG00000020403	rnf17	61	33.179	ENSMOCG00000011818	-	99	33.218	Microtus_ochrogaster
ENSMAMG00000020403	rnf17	99	61.323	ENSMMOG00000019514	rnf17	99	61.401	Mola_mola
ENSMAMG00000020403	rnf17	88	33.769	ENSMODG00000007827	RNF17	72	33.769	Monodelphis_domestica
ENSMAMG00000020403	rnf17	90	69.136	ENSMALG00000016943	rnf17	89	69.136	Monopterus_albus
ENSMAMG00000020403	rnf17	86	33.388	MGP_CAROLIEiJ_G0019337	Rnf17	73	33.388	Mus_caroli
ENSMAMG00000020403	rnf17	86	33.718	ENSMUSG00000000365	Rnf17	73	33.718	Mus_musculus
ENSMAMG00000020403	rnf17	86	33.692	MGP_PahariEiJ_G0030355	Rnf17	73	33.693	Mus_pahari
ENSMAMG00000020403	rnf17	86	34.050	MGP_SPRETEiJ_G0020228	Rnf17	73	34.050	Mus_spretus
ENSMAMG00000020403	rnf17	87	33.499	ENSMPUG00000013305	RNF17	74	33.472	Mustela_putorius_furo
ENSMAMG00000020403	rnf17	86	34.432	ENSMLUG00000003903	RNF17	74	34.326	Myotis_lucifugus
ENSMAMG00000020403	rnf17	86	34.388	ENSNGAG00000013553	Rnf17	73	34.138	Nannospalax_galili
ENSMAMG00000020403	rnf17	100	57.975	ENSNBRG00000012006	rnf17	100	57.975	Neolamprologus_brichardi
ENSMAMG00000020403	rnf17	87	33.828	ENSNLEG00000013780	RNF17	99	35.498	Nomascus_leucogenys
ENSMAMG00000020403	rnf17	99	70.370	ENSONIG00000015746	rnf17	100	60.354	Oreochromis_niloticus
ENSMAMG00000020403	rnf17	87	33.527	ENSOCUG00000007384	RNF17	73	33.527	Oryctolagus_cuniculus
ENSMAMG00000020403	rnf17	93	56.627	ENSORLG00000012818	rnf17	91	56.627	Oryzias_latipes
ENSMAMG00000020403	rnf17	93	56.790	ENSORLG00020009879	-	80	56.790	Oryzias_latipes_hni
ENSMAMG00000020403	rnf17	93	55.556	ENSORLG00015013027	-	80	55.556	Oryzias_latipes_hsok
ENSMAMG00000020403	rnf17	91	51.503	ENSOMEG00000009891	rnf17	97	51.503	Oryzias_melastigma
ENSMAMG00000020403	rnf17	86	33.609	ENSOGAG00000014803	RNF17	74	33.609	Otolemur_garnettii
ENSMAMG00000020403	rnf17	86	33.911	ENSOARG00000014641	RNF17	74	33.911	Ovis_aries
ENSMAMG00000020403	rnf17	86	33.637	ENSPPAG00000028779	RNF17	99	35.152	Pan_paniscus
ENSMAMG00000020403	rnf17	86	34.213	ENSPPRG00000009230	RNF17	99	35.038	Panthera_pardus
ENSMAMG00000020403	rnf17	86	34.213	ENSPTIG00000001738	RNF17	99	35.038	Panthera_tigris_altaica
ENSMAMG00000020403	rnf17	87	33.581	ENSPTRG00000005713	RNF17	99	35.152	Pan_troglodytes
ENSMAMG00000020403	rnf17	87	33.663	ENSPANG00000007640	RNF17	99	34.992	Papio_anubis
ENSMAMG00000020403	rnf17	87	44.196	ENSPKIG00000001648	rnf17	90	44.196	Paramormyrops_kingsleyae
ENSMAMG00000020403	rnf17	86	34.440	ENSPSIG00000011245	RNF17	99	34.440	Pelodiscus_sinensis
ENSMAMG00000020403	rnf17	86	33.306	ENSPEMG00000008693	Rnf17	73	33.306	Peromyscus_maniculatus_bairdii
ENSMAMG00000020403	rnf17	73	34.179	ENSPCIG00000009190	-	94	34.289	Phascolarctos_cinereus
ENSMAMG00000020403	rnf17	97	59.130	ENSPFOG00000007124	rnf17	85	59.797	Poecilia_formosa
ENSMAMG00000020403	rnf17	92	59.931	ENSPLAG00000006198	rnf17	79	60.650	Poecilia_latipinna
ENSMAMG00000020403	rnf17	92	60.104	ENSPMEG00000022432	rnf17	90	58.889	Poecilia_mexicana
ENSMAMG00000020403	rnf17	95	58.108	ENSPREG00000001414	rnf17	94	58.108	Poecilia_reticulata
ENSMAMG00000020403	rnf17	87	33.223	ENSPPYG00000005215	RNF17	74	33.223	Pongo_abelii
ENSMAMG00000020403	rnf17	75	30.631	ENSPCOG00000020211	RNF17	66	30.631	Propithecus_coquereli
ENSMAMG00000020403	rnf17	85	48.529	ENSPVAG00000013021	RNF17	72	48.529	Pteropus_vampyrus
ENSMAMG00000020403	rnf17	95	48.754	ENSPNAG00000027505	rnf17	91	48.710	Pygocentrus_nattereri
ENSMAMG00000020403	rnf17	86	33.527	ENSRNOG00000008059	Rnf17	73	33.527	Rattus_norvegicus
ENSMAMG00000020403	rnf17	86	33.417	ENSRBIG00000027010	RNF17	78	33.417	Rhinopithecus_bieti
ENSMAMG00000020403	rnf17	86	33.663	ENSRROG00000022801	RNF17	99	35.196	Rhinopithecus_roxellana
ENSMAMG00000020403	rnf17	87	33.800	ENSSBOG00000021661	RNF17	99	35.143	Saimiri_boliviensis_boliviensis
ENSMAMG00000020403	rnf17	88	34.069	ENSSHAG00000005609	RNF17	73	34.069	Sarcophilus_harrisii
ENSMAMG00000020403	rnf17	87	45.339	ENSSFOG00015023037	rnf17	89	45.339	Scleropages_formosus
ENSMAMG00000020403	rnf17	90	75.000	ENSSMAG00000007429	rnf17	82	75.000	Scophthalmus_maximus
ENSMAMG00000020403	rnf17	91	64.717	ENSSDUG00000013530	rnf17	90	64.717	Seriola_dumerili
ENSMAMG00000020403	rnf17	91	75.309	ENSSLDG00000019577	rnf17	89	75.309	Seriola_lalandi_dorsalis
ENSMAMG00000020403	rnf17	80	32.857	ENSSARG00000003016	RNF17	62	32.857	Sorex_araneus
ENSMAMG00000020403	rnf17	84	35.379	ENSSPUG00000008917	RNF17	80	35.379	Sphenodon_punctatus
ENSMAMG00000020403	rnf17	89	61.773	ENSSPAG00000001925	rnf17	89	61.773	Stegastes_partitus
ENSMAMG00000020403	rnf17	86	34.160	ENSSSCG00000009572	RNF17	82	34.130	Sus_scrofa
ENSMAMG00000020403	rnf17	69	32.751	ENSTGUG00000011267	-	99	32.751	Taeniopygia_guttata
ENSMAMG00000020403	rnf17	94	52.381	ENSTRUG00000015498	rnf17	83	52.381	Takifugu_rubripes
ENSMAMG00000020403	rnf17	86	51.169	ENSTNIG00000015681	rnf17	99	51.255	Tetraodon_nigroviridis
ENSMAMG00000020403	rnf17	73	38.142	ENSTBEG00000000282	RNF17	61	38.142	Tupaia_belangeri
ENSMAMG00000020403	rnf17	86	32.069	ENSTTRG00000012698	RNF17	74	31.987	Tursiops_truncatus
ENSMAMG00000020403	rnf17	88	33.506	ENSVVUG00000006226	RNF17	75	33.691	Vulpes_vulpes
ENSMAMG00000020403	rnf17	81	30.148	ENSXETG00000034020	RNF17	99	37.065	Xenopus_tropicalis
ENSMAMG00000020403	rnf17	92	58.226	ENSXCOG00000018295	rnf17	90	58.595	Xiphophorus_couchianus
ENSMAMG00000020403	rnf17	92	59.143	ENSXMAG00000014747	rnf17	89	59.755	Xiphophorus_maculatus