EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000020423 (Gene tree)
Gene ID: 113138072
Gene Symbol: cstf3
Alias: cleavage stimulation factor|3 pre-RNA|subunit 3|wu:fa99c02|wu:fb18b09|zgc:56028
Full Name: cleavage stimulation factor subunit 3
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 11542 bases
Position: chrOOHQ01000081.1:1352239-1363780
Accession: 113138072
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000030311	Suf	PF05843.14	1e-83	1	1
ENSMAMP00000030317	Suf	PF05843.14	2.9e-83	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000031100	-	2922	XM_026320202	ENSMAMP00000030311	716 (aa)	XP_026175987	UPI000E463346
ENSMAMT00000031106	-	2118	-	ENSMAMP00000030317	705 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000020423's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000020423's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000020423	cstf3	100	91.086	ENSG00000176102	CSTF3	100	91.086	Homo_sapiens
ENSMAMG00000020423	cstf3	100	98.883	ENSAPOG00000014054	cstf3	100	98.883	Acanthochromis_polyacanthus
ENSMAMG00000020423	cstf3	99	91.525	ENSAMEG00000007187	CSTF3	98	91.525	Ailuropoda_melanoleuca
ENSMAMG00000020423	cstf3	88	93.258	ENSACIG00000005539	cstf3	100	93.258	Amphilophus_citrinellus
ENSMAMG00000020423	cstf3	100	98.883	ENSAOCG00000010930	cstf3	100	98.883	Amphiprion_ocellaris
ENSMAMG00000020423	cstf3	100	98.883	ENSAPEG00000007903	cstf3	100	98.883	Amphiprion_percula
ENSMAMG00000020423	cstf3	100	98.603	ENSATEG00000000190	cstf3	100	98.603	Anabas_testudineus
ENSMAMG00000020423	cstf3	99	91.667	ENSAPLG00000007217	CSTF3	100	91.667	Anas_platyrhynchos
ENSMAMG00000020423	cstf3	100	91.365	ENSACAG00000002823	CSTF3	100	91.365	Anolis_carolinensis
ENSMAMG00000020423	cstf3	100	91.086	ENSANAG00000020699	CSTF3	95	96.575	Aotus_nancymaae
ENSMAMG00000020423	cstf3	100	97.905	ENSACLG00000007820	cstf3	100	97.905	Astatotilapia_calliptera
ENSMAMG00000020423	cstf3	100	92.618	ENSAMXG00000014198	cstf3	100	92.897	Astyanax_mexicanus
ENSMAMG00000020423	cstf3	100	91.086	ENSBTAG00000008617	CSTF3	100	91.395	Bos_taurus
ENSMAMG00000020423	cstf3	97	48.027	WBGene00006307	suf-1	99	48.027	Caenorhabditis_elegans
ENSMAMG00000020423	cstf3	100	91.086	ENSCJAG00000005533	CSTF3	100	91.086	Callithrix_jacchus
ENSMAMG00000020423	cstf3	100	91.086	ENSCAFG00000007264	CSTF3	100	91.086	Canis_familiaris
ENSMAMG00000020423	cstf3	99	91.667	ENSCAFG00020002715	CSTF3	99	91.535	Canis_lupus_dingo
ENSMAMG00000020423	cstf3	98	91.618	ENSCHIG00000016418	CSTF3	100	91.618	Capra_hircus
ENSMAMG00000020423	cstf3	99	91.949	ENSTSYG00000000451	CSTF3	99	96.659	Carlito_syrichta
ENSMAMG00000020423	cstf3	83	90.998	ENSCAPG00000010958	CSTF3	98	90.998	Cavia_aperea
ENSMAMG00000020423	cstf3	100	91.086	ENSCPOG00000005545	CSTF3	100	91.317	Cavia_porcellus
ENSMAMG00000020423	cstf3	100	91.086	ENSCCAG00000024790	CSTF3	96	96.659	Cebus_capucinus
ENSMAMG00000020423	cstf3	100	91.086	ENSCATG00000007080	CSTF3	100	91.086	Cercocebus_atys
ENSMAMG00000020423	cstf3	100	91.086	ENSCLAG00000016179	CSTF3	100	91.086	Chinchilla_lanigera
ENSMAMG00000020423	cstf3	78	97.368	ENSCHOG00000002497	CSTF3	79	97.368	Choloepus_hoffmanni
ENSMAMG00000020423	cstf3	100	91.086	ENSCPBG00000006753	CSTF3	100	91.086	Chrysemys_picta_bellii
ENSMAMG00000020423	cstf3	99	61.997	ENSCING00000006401	-	99	61.997	Ciona_intestinalis
ENSMAMG00000020423	cstf3	98	61.538	ENSCSAVG00000004851	-	100	61.538	Ciona_savignyi
ENSMAMG00000020423	cstf3	100	91.086	ENSCANG00000035468	CSTF3	100	91.086	Colobus_angolensis_palliatus
ENSMAMG00000020423	cstf3	100	90.669	ENSCGRG00001014773	Cstf3	100	90.669	Cricetulus_griseus_chok1gshd
ENSMAMG00000020423	cstf3	100	90.669	ENSCGRG00000004142	Cstf3	100	90.669	Cricetulus_griseus_crigri
ENSMAMG00000020423	cstf3	100	97.067	ENSCSEG00000014283	cstf3	100	97.067	Cynoglossus_semilaevis
ENSMAMG00000020423	cstf3	100	96.369	ENSCVAG00000019739	cstf3	100	96.369	Cyprinodon_variegatus
ENSMAMG00000020423	cstf3	100	94.282	ENSDARG00000018904	cstf3	100	94.282	Danio_rerio
ENSMAMG00000020423	cstf3	99	91.329	ENSDNOG00000007366	CSTF3	99	91.329	Dasypus_novemcinctus
ENSMAMG00000020423	cstf3	99	84.062	ENSDORG00000005898	Cstf3	99	84.062	Dipodomys_ordii
ENSMAMG00000020423	cstf3	99	55.391	FBgn0003559	su(f)	99	55.391	Drosophila_melanogaster
ENSMAMG00000020423	cstf3	85	90.134	ENSETEG00000017097	CSTF3	90	85.670	Echinops_telfairi
ENSMAMG00000020423	cstf3	84	75.845	ENSEBUG00000015459	cstf3	96	75.845	Eptatretus_burgeri
ENSMAMG00000020423	cstf3	99	90.113	ENSEASG00005019884	CSTF3	96	96.437	Equus_asinus_asinus
ENSMAMG00000020423	cstf3	99	90.113	ENSECAG00000023338	CSTF3	96	96.437	Equus_caballus
ENSMAMG00000020423	cstf3	100	86.212	ENSEEUG00000015167	CSTF3	100	86.212	Erinaceus_europaeus
ENSMAMG00000020423	cstf3	100	94.561	ENSELUG00000023393	cstf3	100	94.561	Esox_lucius
ENSMAMG00000020423	cstf3	100	91.226	ENSFCAG00000030711	CSTF3	100	91.226	Felis_catus
ENSMAMG00000020423	cstf3	92	93.514	ENSFALG00000010764	CSTF3	100	90.476	Ficedula_albicollis
ENSMAMG00000020423	cstf3	100	91.226	ENSFDAG00000012082	CSTF3	100	91.226	Fukomys_damarensis
ENSMAMG00000020423	cstf3	100	96.229	ENSFHEG00000020623	cstf3	100	96.229	Fundulus_heteroclitus
ENSMAMG00000020423	cstf3	100	94.708	ENSGMOG00000012275	cstf3	100	94.708	Gadus_morhua
ENSMAMG00000020423	cstf3	100	90.947	ENSGALG00000011685	CSTF3	100	90.947	Gallus_gallus
ENSMAMG00000020423	cstf3	100	96.229	ENSGAFG00000002181	cstf3	100	96.229	Gambusia_affinis
ENSMAMG00000020423	cstf3	100	97.626	ENSGACG00000015997	cstf3	100	97.626	Gasterosteus_aculeatus
ENSMAMG00000020423	cstf3	100	91.086	ENSGAGG00000006200	CSTF3	100	91.086	Gopherus_agassizii
ENSMAMG00000020423	cstf3	99	87.231	ENSGGOG00000026591	CSTF3	96	94.064	Gorilla_gorilla
ENSMAMG00000020423	cstf3	100	97.905	ENSHBUG00000016656	cstf3	100	97.905	Haplochromis_burtoni
ENSMAMG00000020423	cstf3	100	91.086	ENSHGLG00000017834	CSTF3	100	91.086	Heterocephalus_glaber_female
ENSMAMG00000020423	cstf3	100	91.086	ENSHGLG00100018042	CSTF3	100	91.086	Heterocephalus_glaber_male
ENSMAMG00000020423	cstf3	100	94.101	ENSHCOG00000015218	cstf3	100	94.101	Hippocampus_comes
ENSMAMG00000020423	cstf3	100	93.584	ENSIPUG00000013170	CSTF3	100	93.584	Ictalurus_punctatus
ENSMAMG00000020423	cstf3	100	91.086	ENSSTOG00000013306	CSTF3	100	91.086	Ictidomys_tridecemlineatus
ENSMAMG00000020423	cstf3	99	81.497	ENSJJAG00000018430	Cstf3	98	81.497	Jaculus_jaculus
ENSMAMG00000020423	cstf3	100	95.531	ENSKMAG00000010916	cstf3	100	95.531	Kryptolebias_marmoratus
ENSMAMG00000020423	cstf3	100	97.346	ENSLBEG00000002306	cstf3	100	97.346	Labrus_bergylta
ENSMAMG00000020423	cstf3	100	90.377	ENSLACG00000017296	CSTF3	100	90.377	Latimeria_chalumnae
ENSMAMG00000020423	cstf3	100	94.568	ENSLOCG00000004415	cstf3	100	94.568	Lepisosteus_oculatus
ENSMAMG00000020423	cstf3	100	91.086	ENSLAFG00000008712	CSTF3	100	91.086	Loxodonta_africana
ENSMAMG00000020423	cstf3	100	91.086	ENSMFAG00000029516	CSTF3	100	91.086	Macaca_fascicularis
ENSMAMG00000020423	cstf3	100	91.086	ENSMMUG00000002542	CSTF3	100	91.086	Macaca_mulatta
ENSMAMG00000020423	cstf3	100	91.086	ENSMNEG00000021807	CSTF3	100	91.086	Macaca_nemestrina
ENSMAMG00000020423	cstf3	100	91.086	ENSMLEG00000039594	CSTF3	97	94.432	Mandrillus_leucophaeus
ENSMAMG00000020423	cstf3	100	97.905	ENSMZEG00005012082	cstf3	100	97.905	Maylandia_zebra
ENSMAMG00000020423	cstf3	100	90.808	ENSMGAG00000001383	CSTF3	100	90.808	Meleagris_gallopavo
ENSMAMG00000020423	cstf3	100	90.808	ENSMAUG00000002487	Cstf3	100	90.808	Mesocricetus_auratus
ENSMAMG00000020423	cstf3	100	91.086	ENSMICG00000004784	CSTF3	100	91.086	Microcebus_murinus
ENSMAMG00000020423	cstf3	100	90.669	ENSMOCG00000017583	Cstf3	100	90.669	Microtus_ochrogaster
ENSMAMG00000020423	cstf3	99	97.619	ENSMMOG00000016026	cstf3	95	97.619	Mola_mola
ENSMAMG00000020423	cstf3	100	91.365	ENSMODG00000009745	-	100	91.365	Monodelphis_domestica
ENSMAMG00000020423	cstf3	100	80.501	ENSMODG00000025205	-	100	80.501	Monodelphis_domestica
ENSMAMG00000020423	cstf3	100	98.324	ENSMALG00000012050	cstf3	100	98.324	Monopterus_albus
ENSMAMG00000020423	cstf3	100	90.669	MGP_CAROLIEiJ_G0024026	Cstf3	100	90.669	Mus_caroli
ENSMAMG00000020423	cstf3	100	90.669	ENSMUSG00000027176	Cstf3	100	90.669	Mus_musculus
ENSMAMG00000020423	cstf3	100	90.669	MGP_PahariEiJ_G0025464	Cstf3	100	90.669	Mus_pahari
ENSMAMG00000020423	cstf3	100	90.669	MGP_SPRETEiJ_G0024939	Cstf3	100	90.669	Mus_spretus
ENSMAMG00000020423	cstf3	100	90.947	ENSMPUG00000011457	CSTF3	100	90.947	Mustela_putorius_furo
ENSMAMG00000020423	cstf3	100	88.162	ENSMLUG00000026022	-	100	88.162	Myotis_lucifugus
ENSMAMG00000020423	cstf3	99	91.667	ENSMLUG00000003073	-	99	91.667	Myotis_lucifugus
ENSMAMG00000020423	cstf3	100	90.669	ENSNGAG00000010677	Cstf3	100	90.669	Nannospalax_galili
ENSMAMG00000020423	cstf3	88	98.555	ENSNBRG00000007345	cstf3	100	98.555	Neolamprologus_brichardi
ENSMAMG00000020423	cstf3	100	91.086	ENSNLEG00000017901	CSTF3	97	96.575	Nomascus_leucogenys
ENSMAMG00000020423	cstf3	73	90.631	ENSMEUG00000005640	-	100	90.631	Notamacropus_eugenii
ENSMAMG00000020423	cstf3	68	88.158	ENSOPRG00000000199	-	67	88.158	Ochotona_princeps
ENSMAMG00000020423	cstf3	100	73.692	ENSODEG00000006311	-	97	79.088	Octodon_degus
ENSMAMG00000020423	cstf3	100	91.086	ENSODEG00000016737	-	100	91.086	Octodon_degus
ENSMAMG00000020423	cstf3	100	97.905	ENSONIG00000005563	cstf3	100	97.905	Oreochromis_niloticus
ENSMAMG00000020423	cstf3	90	90.308	ENSOANG00000015140	CSTF3	100	90.308	Ornithorhynchus_anatinus
ENSMAMG00000020423	cstf3	100	90.808	ENSOCUG00000015417	CSTF3	100	90.808	Oryctolagus_cuniculus
ENSMAMG00000020423	cstf3	100	95.670	ENSORLG00000009762	cstf3	100	95.670	Oryzias_latipes
ENSMAMG00000020423	cstf3	100	95.670	ENSORLG00020005540	cstf3	100	95.670	Oryzias_latipes_hni
ENSMAMG00000020423	cstf3	100	95.531	ENSORLG00015003551	cstf3	100	95.531	Oryzias_latipes_hsok
ENSMAMG00000020423	cstf3	100	96.089	ENSOMEG00000003848	cstf3	100	96.089	Oryzias_melastigma
ENSMAMG00000020423	cstf3	100	90.569	ENSOGAG00000010229	CSTF3	100	90.569	Otolemur_garnettii
ENSMAMG00000020423	cstf3	90	91.135	ENSOARG00000017271	CSTF3	99	91.135	Ovis_aries
ENSMAMG00000020423	cstf3	99	89.670	ENSPPAG00000027358	CSTF3	99	89.670	Pan_paniscus
ENSMAMG00000020423	cstf3	100	91.226	ENSPPRG00000016852	CSTF3	100	91.226	Panthera_pardus
ENSMAMG00000020423	cstf3	100	91.226	ENSPTIG00000008716	CSTF3	100	91.226	Panthera_tigris_altaica
ENSMAMG00000020423	cstf3	100	91.086	ENSPTRG00000003485	CSTF3	100	91.086	Pan_troglodytes
ENSMAMG00000020423	cstf3	100	91.086	ENSPANG00000013722	CSTF3	97	94.432	Papio_anubis
ENSMAMG00000020423	cstf3	100	94.282	ENSPKIG00000023648	cstf3	100	94.282	Paramormyrops_kingsleyae
ENSMAMG00000020423	cstf3	100	91.226	ENSPSIG00000009173	CSTF3	100	91.226	Pelodiscus_sinensis
ENSMAMG00000020423	cstf3	77	97.993	ENSPMGG00000000164	cstf3	99	97.993	Periophthalmus_magnuspinnatus
ENSMAMG00000020423	cstf3	100	90.669	ENSPEMG00000011481	Cstf3	100	90.669	Peromyscus_maniculatus_bairdii
ENSMAMG00000020423	cstf3	99	79.014	ENSPMAG00000007282	cstf3	99	79.325	Petromyzon_marinus
ENSMAMG00000020423	cstf3	100	88.734	ENSPCIG00000026406	-	100	91.360	Phascolarctos_cinereus
ENSMAMG00000020423	cstf3	100	76.773	ENSPCIG00000030419	-	90	77.051	Phascolarctos_cinereus
ENSMAMG00000020423	cstf3	100	96.648	ENSPFOG00000017239	cstf3	100	96.648	Poecilia_formosa
ENSMAMG00000020423	cstf3	100	96.788	ENSPLAG00000009456	cstf3	100	96.788	Poecilia_latipinna
ENSMAMG00000020423	cstf3	100	96.648	ENSPMEG00000010320	cstf3	100	96.648	Poecilia_mexicana
ENSMAMG00000020423	cstf3	100	96.508	ENSPREG00000013549	cstf3	100	96.508	Poecilia_reticulata
ENSMAMG00000020423	cstf3	100	91.086	ENSPPYG00000003375	CSTF3	100	91.086	Pongo_abelii
ENSMAMG00000020423	cstf3	71	95.819	ENSPCAG00000008025	-	71	95.819	Procavia_capensis
ENSMAMG00000020423	cstf3	100	87.412	ENSPCOG00000014417	CSTF3	100	87.412	Propithecus_coquereli
ENSMAMG00000020423	cstf3	100	85.933	ENSPVAG00000002350	CSTF3	100	85.933	Pteropus_vampyrus
ENSMAMG00000020423	cstf3	100	97.905	ENSPNYG00000018259	cstf3	100	97.905	Pundamilia_nyererei
ENSMAMG00000020423	cstf3	100	94.979	ENSPNAG00000020182	cstf3	100	94.979	Pygocentrus_nattereri
ENSMAMG00000020423	cstf3	88	90.400	ENSRNOG00000012089	Cstf3	100	90.400	Rattus_norvegicus
ENSMAMG00000020423	cstf3	99	90.254	ENSRBIG00000044258	CSTF3	100	91.040	Rhinopithecus_bieti
ENSMAMG00000020423	cstf3	100	91.086	ENSRROG00000043450	CSTF3	100	91.086	Rhinopithecus_roxellana
ENSMAMG00000020423	cstf3	100	91.086	ENSSBOG00000024764	CSTF3	98	96.659	Saimiri_boliviensis_boliviensis
ENSMAMG00000020423	cstf3	99	91.808	ENSSHAG00000018128	-	99	91.808	Sarcophilus_harrisii
ENSMAMG00000020423	cstf3	100	81.337	ENSSHAG00000003135	-	99	81.337	Sarcophilus_harrisii
ENSMAMG00000020423	cstf3	100	93.863	ENSSFOG00015022133	cstf3	100	93.863	Scleropages_formosus
ENSMAMG00000020423	cstf3	100	97.905	ENSSMAG00000002197	cstf3	100	97.905	Scophthalmus_maximus
ENSMAMG00000020423	cstf3	100	99.162	ENSSDUG00000020426	cstf3	100	99.162	Seriola_dumerili
ENSMAMG00000020423	cstf3	100	99.162	ENSSLDG00000025649	cstf3	100	99.162	Seriola_lalandi_dorsalis
ENSMAMG00000020423	cstf3	100	91.086	ENSSARG00000000391	CSTF3	100	91.086	Sorex_araneus
ENSMAMG00000020423	cstf3	96	91.317	ENSSPUG00000010546	CSTF3	100	91.317	Sphenodon_punctatus
ENSMAMG00000020423	cstf3	100	98.743	ENSSPAG00000004958	cstf3	100	98.743	Stegastes_partitus
ENSMAMG00000020423	cstf3	99	91.268	ENSSSCG00000040954	CSTF3	99	91.268	Sus_scrofa
ENSMAMG00000020423	cstf3	99	91.384	ENSTGUG00000005010	CSTF3	100	91.384	Taeniopygia_guttata
ENSMAMG00000020423	cstf3	100	95.810	ENSTRUG00000004959	cstf3	100	95.810	Takifugu_rubripes
ENSMAMG00000020423	cstf3	99	96.765	ENSTNIG00000013811	cstf3	99	96.765	Tetraodon_nigroviridis
ENSMAMG00000020423	cstf3	89	88.474	ENSTBEG00000001544	CSTF3	90	88.474	Tupaia_belangeri
ENSMAMG00000020423	cstf3	100	88.301	ENSTTRG00000016366	CSTF3	100	88.301	Tursiops_truncatus
ENSMAMG00000020423	cstf3	99	91.384	ENSUMAG00000018971	CSTF3	100	90.720	Ursus_maritimus
ENSMAMG00000020423	cstf3	100	90.947	ENSVPAG00000007800	CSTF3	100	90.947	Vicugna_pacos
ENSMAMG00000020423	cstf3	99	91.667	ENSVVUG00000014938	CSTF3	100	91.040	Vulpes_vulpes
ENSMAMG00000020423	cstf3	66	42.531	ENSXETG00000017946	-	99	42.531	Xenopus_tropicalis
ENSMAMG00000020423	cstf3	88	75.781	ENSXETG00000021399	cstf3	100	76.861	Xenopus_tropicalis
ENSMAMG00000020423	cstf3	88	96.308	ENSXCOG00000011741	cstf3	100	96.308	Xiphophorus_couchianus
ENSMAMG00000020423	cstf3	100	96.369	ENSXMAG00000009545	cstf3	100	96.369	Xiphophorus_maculatus