EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000020468 (Gene tree)
Gene ID: 113141680
Gene Symbol: -
Alias: -
Full Name: zinc finger and SCAN domain-containing protein 21-like
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 4765 bases
Position: chrOOHQ01000092.1:13532316-13537080
Accession: 113141680
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000030364	zf-C2H2	PF00096.26	1.1e-16	1	4
ENSMAMP00000030364	zf-C2H2	PF00096.26	1.1e-16	2	4
ENSMAMP00000030364	zf-C2H2	PF00096.26	1.1e-16	3	4
ENSMAMP00000030364	zf-C2H2	PF00096.26	1.1e-16	4	4
ENSMAMP00000030364	zf-met	PF12874.7	1.3e-06	1	2
ENSMAMP00000030364	zf-met	PF12874.7	1.3e-06	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000031154	-	3899	-	ENSMAMP00000030364	448 (aa)	XP_026182026	UPI000E462CBC

Gene Model

Click here to download ENSMAMG00000020468's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000020468's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000020468	-	51	39.062	ENSMAMG00000006312	-	91	47.826
ENSMAMG00000020468	-	56	38.060	ENSMAMG00000022152	-	64	38.667
ENSMAMG00000020468	-	57	42.029	ENSMAMG00000022154	-	52	42.029
ENSMAMG00000020468	-	98	38.255	ENSMAMG00000018137	-	59	38.255
ENSMAMG00000020468	-	57	33.913	ENSMAMG00000018071	-	72	33.913
ENSMAMG00000020468	-	57	38.621	ENSMAMG00000018114	-	89	36.054
ENSMAMG00000020468	-	58	38.255	ENSMAMG00000009051	-	88	36.800

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000020468	-	99	75.497	ENSATEG00000023773	-	97	75.497	Anabas_testudineus
ENSMAMG00000020468	-	98	57.788	ENSCSEG00000011817	-	96	57.111	Cynoglossus_semilaevis
ENSMAMG00000020468	-	50	31.579	ENSDARG00000113971	LO018181.1	65	36.478	Danio_rerio
ENSMAMG00000020468	-	51	51.111	ENSDARG00000089715	si:cabz01054394.7	80	51.111	Danio_rerio
ENSMAMG00000020468	-	54	45.000	ENSDARG00000103244	CABZ01081752.3	80	42.029	Danio_rerio
ENSMAMG00000020468	-	51	38.406	ENSDARG00000091477	znf1066	81	52.778	Danio_rerio
ENSMAMG00000020468	-	99	60.714	ENSFHEG00000015400	-	96	60.987	Fundulus_heteroclitus
ENSMAMG00000020468	-	99	62.889	ENSGAFG00000013839	-	99	63.111	Gambusia_affinis
ENSMAMG00000020468	-	58	31.694	ENSKMAG00000011441	-	65	35.507	Kryptolebias_marmoratus
ENSMAMG00000020468	-	73	86.667	ENSNBRG00000019881	-	98	86.667	Neolamprologus_brichardi
ENSMAMG00000020468	-	57	38.971	ENSORLG00000012434	znf1064	60	38.971	Oryzias_latipes
ENSMAMG00000020468	-	61	55.273	ENSORLG00015013828	-	88	54.909	Oryzias_latipes_hsok
ENSMAMG00000020468	-	98	53.020	ENSOMEG00000005928	-	98	53.244	Oryzias_melastigma
ENSMAMG00000020468	-	64	76.087	ENSPFOG00000005998	-	82	76.087	Poecilia_formosa
ENSMAMG00000020468	-	99	60.706	ENSPLAG00000001674	-	97	60.927	Poecilia_latipinna
ENSMAMG00000020468	-	99	60.175	ENSPMEG00000013200	-	98	60.394	Poecilia_mexicana
ENSMAMG00000020468	-	99	70.288	ENSSMAG00000002598	-	99	70.288	Scophthalmus_maximus
ENSMAMG00000020468	-	99	73.504	ENSSDUG00000015456	-	97	73.718	Seriola_dumerili
ENSMAMG00000020468	-	99	74.009	ENSSPAG00000017203	-	97	74.009	Stegastes_partitus
ENSMAMG00000020468	-	99	62.227	ENSXMAG00000021195	-	97	62.009	Xiphophorus_maculatus