EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000020499 (Gene tree)
Gene ID: 113129841
Gene Symbol: RBM38
Alias: HSRNASEB|RNPC1|SEB4D|dJ800J21.2|seb4B
Full Name: RNA-binding protein 38-like
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 9544 bases
Position: chrOOHQ01000082.1:21254487-21264030
Accession: 113129841
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000030399	RRM_1	PF00076.22	3.4e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000031194	RBM38-201	2408	-	ENSMAMP00000030399	243 (aa)	XP_026161769	UPI000E45C8E0

Gene Model

Click here to download ENSMAMG00000020499's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000020499's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000020499	RBM38	95	59.574	ENSMAMG00000013172	rbm24a	100	59.109
ENSMAMG00000020499	RBM38	95	59.414	ENSMAMG00000012841	rbm24b	100	59.216
ENSMAMG00000020499	RBM38	100	67.717	ENSMAMG00000024135	rbm38	98	65.339

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000020499	RBM38	95	65.823	ENSG00000132819	RBM38	94	87.288	Homo_sapiens
ENSMAMG00000020499	RBM38	100	95.082	ENSAPOG00000009939	-	100	95.082	Acanthochromis_polyacanthus
ENSMAMG00000020499	RBM38	100	67.589	ENSAPOG00000003301	rbm38	98	67.068	Acanthochromis_polyacanthus
ENSMAMG00000020499	RBM38	100	93.033	ENSACIG00000012502	-	100	97.458	Amphilophus_citrinellus
ENSMAMG00000020499	RBM38	100	66.142	ENSACIG00000000010	rbm38	98	66.135	Amphilophus_citrinellus
ENSMAMG00000020499	RBM38	97	95.319	ENSAOCG00000012559	RBM38	99	94.915	Amphiprion_ocellaris
ENSMAMG00000020499	RBM38	100	67.589	ENSAOCG00000013497	-	98	67.068	Amphiprion_ocellaris
ENSMAMG00000020499	RBM38	100	67.589	ENSAPEG00000013137	rbm38	98	67.068	Amphiprion_percula
ENSMAMG00000020499	RBM38	100	94.672	ENSAPEG00000023581	-	100	94.672	Amphiprion_percula
ENSMAMG00000020499	RBM38	100	65.354	ENSATEG00000016366	rbm38	98	65.339	Anabas_testudineus
ENSMAMG00000020499	RBM38	100	95.902	ENSATEG00000016710	-	100	95.902	Anabas_testudineus
ENSMAMG00000020499	RBM38	95	67.521	ENSACAG00000016238	RBM38	90	64.807	Anolis_carolinensis
ENSMAMG00000020499	RBM38	95	66.667	ENSANAG00000031959	RBM38	82	90.099	Aotus_nancymaae
ENSMAMG00000020499	RBM38	100	90.574	ENSACLG00000019514	-	100	90.574	Astatotilapia_calliptera
ENSMAMG00000020499	RBM38	99	63.071	ENSAMXG00000038120	rbm38	99	61.826	Astyanax_mexicanus
ENSMAMG00000020499	RBM38	100	78.279	ENSAMXG00000015601	-	100	76.230	Astyanax_mexicanus
ENSMAMG00000020499	RBM38	95	65.823	ENSBTAG00000008105	RBM38	91	64.135	Bos_taurus
ENSMAMG00000020499	RBM38	57	58.278	WBGene00006321	sup-12	59	83.146	Caenorhabditis_elegans
ENSMAMG00000020499	RBM38	95	66.667	ENSCJAG00000019139	RBM38	82	90.099	Callithrix_jacchus
ENSMAMG00000020499	RBM38	95	67.511	ENSCAFG00020021943	RBM38	91	65.966	Canis_lupus_dingo
ENSMAMG00000020499	RBM38	95	64.407	ENSCHIG00000002609	RBM38	91	62.869	Capra_hircus
ENSMAMG00000020499	RBM38	95	65.823	ENSCPOG00000012781	RBM38	91	64.135	Cavia_porcellus
ENSMAMG00000020499	RBM38	95	66.667	ENSCCAG00000036872	RBM38	82	90.099	Cebus_capucinus
ENSMAMG00000020499	RBM38	95	65.254	ENSCATG00000032133	RBM38	82	90.099	Cercocebus_atys
ENSMAMG00000020499	RBM38	95	65.401	ENSCLAG00000005906	RBM38	94	63.559	Chinchilla_lanigera
ENSMAMG00000020499	RBM38	95	65.254	ENSCSAG00000015503	RBM38	90	64.255	Chlorocebus_sabaeus
ENSMAMG00000020499	RBM38	93	67.241	ENSCPBG00000024059	RBM38	99	64.912	Chrysemys_picta_bellii
ENSMAMG00000020499	RBM38	60	61.538	ENSCING00000025102	-	66	62.658	Ciona_intestinalis
ENSMAMG00000020499	RBM38	62	63.057	ENSCSAVG00000001132	-	57	62.987	Ciona_savignyi
ENSMAMG00000020499	RBM38	95	51.282	ENSCANG00000030105	-	80	48.718	Colobus_angolensis_palliatus
ENSMAMG00000020499	RBM38	96	62.083	ENSCGRG00001012928	Rbm38	93	60.000	Cricetulus_griseus_chok1gshd
ENSMAMG00000020499	RBM38	81	60.804	ENSCSEG00000020943	rbm38	60	66.851	Cynoglossus_semilaevis
ENSMAMG00000020499	RBM38	100	89.344	ENSCSEG00000004701	-	100	89.344	Cynoglossus_semilaevis
ENSMAMG00000020499	RBM38	99	62.097	ENSCVAG00000015952	rbm38	98	62.151	Cyprinodon_variegatus
ENSMAMG00000020499	RBM38	100	88.115	ENSCVAG00000005472	-	100	88.115	Cyprinodon_variegatus
ENSMAMG00000020499	RBM38	99	72.314	ENSDARG00000058818	rbm38	100	69.421	Danio_rerio
ENSMAMG00000020499	RBM38	95	65.812	ENSDNOG00000032004	RBM38	100	64.378	Dasypus_novemcinctus
ENSMAMG00000020499	RBM38	95	65.678	ENSECAG00000007700	RBM38	91	63.713	Equus_caballus
ENSMAMG00000020499	RBM38	95	63.291	ENSEEUG00000013489	RBM38	91	62.712	Erinaceus_europaeus
ENSMAMG00000020499	RBM38	100	81.928	ENSELUG00000005849	-	100	81.526	Esox_lucius
ENSMAMG00000020499	RBM38	90	68.142	ENSELUG00000000585	-	98	64.889	Esox_lucius
ENSMAMG00000020499	RBM38	95	64.831	ENSFCAG00000042916	RBM38	82	89.109	Felis_catus
ENSMAMG00000020499	RBM38	70	76.744	ENSFALG00000010805	RBM38	88	75.294	Ficedula_albicollis
ENSMAMG00000020499	RBM38	100	82.258	ENSFHEG00000006160	-	100	83.065	Fundulus_heteroclitus
ENSMAMG00000020499	RBM38	100	64.542	ENSFHEG00000017748	rbm38	98	62.948	Fundulus_heteroclitus
ENSMAMG00000020499	RBM38	75	87.568	ENSGMOG00000016655	-	99	85.946	Gadus_morhua
ENSMAMG00000020499	RBM38	93	67.100	ENSGALG00000026081	RBM38	99	66.522	Gallus_gallus
ENSMAMG00000020499	RBM38	95	67.965	ENSGACG00000015224	rbm38	100	67.965	Gasterosteus_aculeatus
ENSMAMG00000020499	RBM38	94	86.087	ENSGACG00000009873	-	100	86.087	Gasterosteus_aculeatus
ENSMAMG00000020499	RBM38	93	67.672	ENSGAGG00000001187	RBM38	99	64.912	Gopherus_agassizii
ENSMAMG00000020499	RBM38	100	90.574	ENSHBUG00000011778	-	100	90.574	Haplochromis_burtoni
ENSMAMG00000020499	RBM38	100	66.535	ENSHBUG00000012058	rbm38	98	66.135	Haplochromis_burtoni
ENSMAMG00000020499	RBM38	95	60.851	ENSHGLG00000015077	RBM38	91	62.869	Heterocephalus_glaber_female
ENSMAMG00000020499	RBM38	85	90.821	ENSHCOG00000005622	-	57	91.919	Hippocampus_comes
ENSMAMG00000020499	RBM38	87	52.915	ENSHCOG00000019040	rbm38	78	56.122	Hippocampus_comes
ENSMAMG00000020499	RBM38	100	72.653	ENSIPUG00000019349	-	100	71.837	Ictalurus_punctatus
ENSMAMG00000020499	RBM38	92	62.069	ENSKMAG00000012402	rbm38	98	62.069	Kryptolebias_marmoratus
ENSMAMG00000020499	RBM38	100	64.961	ENSLBEG00000018878	rbm38	98	65.600	Labrus_bergylta
ENSMAMG00000020499	RBM38	100	90.726	ENSLBEG00000016163	RBM38	100	90.726	Labrus_bergylta
ENSMAMG00000020499	RBM38	100	75.309	ENSLOCG00000003456	rbm38	100	74.897	Lepisosteus_oculatus
ENSMAMG00000020499	RBM38	95	65.254	ENSMFAG00000043808	RBM38	82	90.099	Macaca_fascicularis
ENSMAMG00000020499	RBM38	95	65.254	ENSMMUG00000031391	RBM38	82	90.099	Macaca_mulatta
ENSMAMG00000020499	RBM38	95	65.254	ENSMNEG00000034683	RBM38	82	90.099	Macaca_nemestrina
ENSMAMG00000020499	RBM38	100	90.574	ENSMZEG00005000849	-	100	90.574	Maylandia_zebra
ENSMAMG00000020499	RBM38	100	66.535	ENSMZEG00005026036	rbm38	98	66.135	Maylandia_zebra
ENSMAMG00000020499	RBM38	96	63.750	ENSMAUG00000021211	Rbm38	93	61.250	Mesocricetus_auratus
ENSMAMG00000020499	RBM38	95	65.401	ENSMICG00000038011	RBM38	100	64.831	Microcebus_murinus
ENSMAMG00000020499	RBM38	97	62.810	ENSMOCG00000008715	Rbm38	94	60.581	Microtus_ochrogaster
ENSMAMG00000020499	RBM38	100	93.852	ENSMMOG00000020051	-	100	93.852	Mola_mola
ENSMAMG00000020499	RBM38	93	67.686	ENSMODG00000016458	RBM38	91	65.789	Monodelphis_domestica
ENSMAMG00000020499	RBM38	78	96.296	ENSMALG00000004680	RBM38	72	96.296	Monopterus_albus
ENSMAMG00000020499	RBM38	100	58.065	ENSMALG00000022327	rbm38	72	73.810	Monopterus_albus
ENSMAMG00000020499	RBM38	97	61.157	MGP_CAROLIEiJ_G0024745	Rbm38	94	62.397	Mus_caroli
ENSMAMG00000020499	RBM38	97	61.157	ENSMUSG00000027510	Rbm38	94	62.397	Mus_musculus
ENSMAMG00000020499	RBM38	97	61.157	MGP_PahariEiJ_G0026186	Rbm38	94	62.397	Mus_pahari
ENSMAMG00000020499	RBM38	97	61.157	MGP_SPRETEiJ_G0025665	Rbm38	94	62.397	Mus_spretus
ENSMAMG00000020499	RBM38	75	74.468	ENSMPUG00000006518	RBM38	91	74.468	Mustela_putorius_furo
ENSMAMG00000020499	RBM38	95	64.407	ENSMLUG00000011140	RBM38	100	62.553	Myotis_lucifugus
ENSMAMG00000020499	RBM38	100	66.929	ENSNBRG00000022685	rbm38	98	66.534	Neolamprologus_brichardi
ENSMAMG00000020499	RBM38	100	90.984	ENSNBRG00000022545	-	100	90.984	Neolamprologus_brichardi
ENSMAMG00000020499	RBM38	95	66.245	ENSODEG00000007980	RBM38	91	64.557	Octodon_degus
ENSMAMG00000020499	RBM38	99	66.798	ENSONIG00000017073	rbm38	100	66.400	Oreochromis_niloticus
ENSMAMG00000020499	RBM38	99	90.947	ENSONIG00000020324	-	100	90.947	Oreochromis_niloticus
ENSMAMG00000020499	RBM38	92	66.667	ENSOANG00000009259	RBM38	81	65.487	Ornithorhynchus_anatinus
ENSMAMG00000020499	RBM38	100	57.371	ENSORLG00000012154	rbm38	98	57.371	Oryzias_latipes
ENSMAMG00000020499	RBM38	100	85.366	ENSORLG00000027180	-	100	86.585	Oryzias_latipes
ENSMAMG00000020499	RBM38	100	85.366	ENSORLG00020020751	-	100	86.585	Oryzias_latipes_hni
ENSMAMG00000020499	RBM38	100	59.055	ENSORLG00020017871	rbm38	98	58.566	Oryzias_latipes_hni
ENSMAMG00000020499	RBM38	100	87.347	ENSORLG00015017040	-	100	87.347	Oryzias_latipes_hsok
ENSMAMG00000020499	RBM38	100	59.524	ENSORLG00015012606	rbm38	98	58.167	Oryzias_latipes_hsok
ENSMAMG00000020499	RBM38	99	60.317	ENSOMEG00000006805	rbm38	98	59.363	Oryzias_melastigma
ENSMAMG00000020499	RBM38	100	89.754	ENSOMEG00000023912	-	100	89.754	Oryzias_melastigma
ENSMAMG00000020499	RBM38	95	66.245	ENSOGAG00000029136	RBM38	90	64.557	Otolemur_garnettii
ENSMAMG00000020499	RBM38	95	64.831	ENSPPRG00000009507	RBM38	82	89.109	Panthera_pardus
ENSMAMG00000020499	RBM38	75	74.468	ENSPTRG00000013661	RBM38	82	90.099	Pan_troglodytes
ENSMAMG00000020499	RBM38	52	84.921	ENSPTRG00000045845	-	68	84.921	Pan_troglodytes
ENSMAMG00000020499	RBM38	93	54.506	ENSPANG00000033127	-	94	52.119	Papio_anubis
ENSMAMG00000020499	RBM38	95	65.254	ENSPANG00000020919	-	82	90.099	Papio_anubis
ENSMAMG00000020499	RBM38	100	72.245	ENSPKIG00000018122	-	100	88.136	Paramormyrops_kingsleyae
ENSMAMG00000020499	RBM38	100	71.774	ENSPKIG00000025417	rbm38	100	71.774	Paramormyrops_kingsleyae
ENSMAMG00000020499	RBM38	96	65.975	ENSPSIG00000011649	RBM38	94	63.291	Pelodiscus_sinensis
ENSMAMG00000020499	RBM38	100	81.377	ENSPMGG00000017094	-	100	81.377	Periophthalmus_magnuspinnatus
ENSMAMG00000020499	RBM38	99	64.659	ENSPMGG00000011343	rbm38	98	63.454	Periophthalmus_magnuspinnatus
ENSMAMG00000020499	RBM38	93	66.810	ENSPCIG00000013648	RBM38	91	64.474	Phascolarctos_cinereus
ENSMAMG00000020499	RBM38	100	60.474	ENSPFOG00000011658	rbm38	98	62.205	Poecilia_formosa
ENSMAMG00000020499	RBM38	100	86.585	ENSPLAG00000002500	-	100	84.553	Poecilia_latipinna
ENSMAMG00000020499	RBM38	100	61.024	ENSPLAG00000005218	rbm38	98	62.205	Poecilia_latipinna
ENSMAMG00000020499	RBM38	100	60.079	ENSPMEG00000015770	rbm38	98	62.205	Poecilia_mexicana
ENSMAMG00000020499	RBM38	100	60.474	ENSPREG00000007398	rbm38	98	62.205	Poecilia_reticulata
ENSMAMG00000020499	RBM38	95	64.979	ENSPCOG00000026201	RBM38	81	90.099	Propithecus_coquereli
ENSMAMG00000020499	RBM38	96	42.500	ENSPVAG00000006457	RBM38	66	87.097	Pteropus_vampyrus
ENSMAMG00000020499	RBM38	100	66.142	ENSPNYG00000021373	rbm38	98	65.737	Pundamilia_nyererei
ENSMAMG00000020499	RBM38	100	90.574	ENSPNYG00000019727	-	100	96.610	Pundamilia_nyererei
ENSMAMG00000020499	RBM38	96	71.064	ENSPNAG00000010596	rbm38	82	80.102	Pygocentrus_nattereri
ENSMAMG00000020499	RBM38	100	77.869	ENSPNAG00000015123	-	98	84.328	Pygocentrus_nattereri
ENSMAMG00000020499	RBM38	97	64.050	ENSRNOG00000006420	Rbm38	94	62.810	Rattus_norvegicus
ENSMAMG00000020499	RBM38	93	53.947	ENSRROG00000036388	-	88	51.754	Rhinopithecus_roxellana
ENSMAMG00000020499	RBM38	95	66.667	ENSSBOG00000031053	RBM38	93	90.099	Saimiri_boliviensis_boliviensis
ENSMAMG00000020499	RBM38	100	70.968	ENSSFOG00015004453	rbm38	100	72.358	Scleropages_formosus
ENSMAMG00000020499	RBM38	100	95.082	ENSSDUG00000021082	RBM38	100	95.082	Seriola_dumerili
ENSMAMG00000020499	RBM38	100	68.898	ENSSDUG00000022611	rbm38	98	68.924	Seriola_dumerili
ENSMAMG00000020499	RBM38	100	68.898	ENSSLDG00000010845	rbm38	98	68.924	Seriola_lalandi_dorsalis
ENSMAMG00000020499	RBM38	100	95.902	ENSSLDG00000011778	RBM38	100	95.902	Seriola_lalandi_dorsalis
ENSMAMG00000020499	RBM38	100	94.672	ENSSPAG00000020989	RBM38	100	94.672	Stegastes_partitus
ENSMAMG00000020499	RBM38	100	66.929	ENSSPAG00000011113	rbm38	98	66.932	Stegastes_partitus
ENSMAMG00000020499	RBM38	95	65.823	ENSSSCG00000007504	RBM38	91	64.135	Sus_scrofa
ENSMAMG00000020499	RBM38	98	65.714	ENSTRUG00000024954	rbm38	97	65.306	Takifugu_rubripes
ENSMAMG00000020499	RBM38	100	88.571	ENSTRUG00000019869	-	100	88.571	Takifugu_rubripes
ENSMAMG00000020499	RBM38	95	85.714	ENSTNIG00000007093	-	100	84.416	Tetraodon_nigroviridis
ENSMAMG00000020499	RBM38	95	64.831	ENSUAMG00000019780	RBM38	91	64.706	Ursus_americanus
ENSMAMG00000020499	RBM38	95	67.511	ENSVVUG00000017246	RBM38	91	65.966	Vulpes_vulpes
ENSMAMG00000020499	RBM38	93	64.629	ENSXETG00000011268	rbm38	97	62.281	Xenopus_tropicalis
ENSMAMG00000020499	RBM38	71	75.978	ENSXCOG00000017324	-	65	88.811	Xiphophorus_couchianus
ENSMAMG00000020499	RBM38	100	62.000	ENSXMAG00000023662	rbm38	98	63.745	Xiphophorus_maculatus