EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000020539 (Gene tree)
Gene ID: 113130594
Gene Symbol: lsm14b
Alias: zRAP55|zgc:55673
Full Name: protein LSM14 homolog B-like
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 4396 bases
Position: chrOOHQ01000082.1:21308422-21312817
Accession: 113130594
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000030451	FDF	PF09532.10	9e-11	1	1
ENSMAMP00000030455	FDF	PF09532.10	1.1e-10	1	1
ENSMAMP00000030451	SM-ATX	PF14438.6	3.6e-08	1	1
ENSMAMP00000030455	SM-ATX	PF14438.6	4.2e-08	1	1
ENSMAMP00000030451	LSM14	PF12701.7	2.2e-29	1	1
ENSMAMP00000030455	LSM14	PF12701.7	2.7e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000031247	-	2590	-	ENSMAMP00000030451	373 (aa)	XP_026163141	UPI000E459940
ENSMAMT00000031251	-	2417	-	ENSMAMP00000030455	417 (aa)	XP_026163139	UPI000E45DE70

Gene Model

Click here to download ENSMAMG00000020539's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000020539's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000020539	lsm14b	96	50.681	ENSMAMG00000024124	LSM14B	89	50.440
ENSMAMG00000020539	lsm14b	90	39.409	ENSMAMG00000016088	lsm14aa	85	39.952
ENSMAMG00000020539	lsm14b	91	43.307	ENSMAMG00000004948	lsm14ab	84	43.045

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000020539	lsm14b	92	54.324	ENSG00000149657	LSM14B	100	49.840	Homo_sapiens
ENSMAMG00000020539	lsm14b	100	81.016	ENSAPOG00000001780	lsm14b	100	81.016	Acanthochromis_polyacanthus
ENSMAMG00000020539	lsm14b	91	47.395	ENSAMEG00000013430	LSM14B	91	46.231	Ailuropoda_melanoleuca
ENSMAMG00000020539	lsm14b	62	41.532	ENSACIG00000003147	LSM14B	87	37.759	Amphilophus_citrinellus
ENSMAMG00000020539	lsm14b	99	71.274	ENSACIG00000012266	lsm14b	99	69.106	Amphilophus_citrinellus
ENSMAMG00000020539	lsm14b	100	81.283	ENSAOCG00000012380	lsm14b	100	81.283	Amphiprion_ocellaris
ENSMAMG00000020539	lsm14b	98	46.392	ENSAOCG00000006667	LSM14B	89	45.892	Amphiprion_ocellaris
ENSMAMG00000020539	lsm14b	100	72.995	ENSAPEG00000023633	lsm14b	100	71.011	Amphiprion_percula
ENSMAMG00000020539	lsm14b	66	40.468	ENSATEG00000015895	LSM14B	87	35.017	Anabas_testudineus
ENSMAMG00000020539	lsm14b	100	78.457	ENSATEG00000016603	lsm14b	100	78.457	Anabas_testudineus
ENSMAMG00000020539	lsm14b	82	45.479	ENSAPLG00000013203	LSM14B	90	43.407	Anas_platyrhynchos
ENSMAMG00000020539	lsm14b	91	52.078	ENSACAG00000016195	LSM14B	89	51.685	Anolis_carolinensis
ENSMAMG00000020539	lsm14b	92	54.223	ENSANAG00000037915	LSM14B	90	53.039	Aotus_nancymaae
ENSMAMG00000020539	lsm14b	53	40.191	ENSACLG00000019624	-	67	39.109	Astatotilapia_calliptera
ENSMAMG00000020539	lsm14b	53	38.756	ENSACLG00000011955	-	66	37.313	Astatotilapia_calliptera
ENSMAMG00000020539	lsm14b	100	75.668	ENSACLG00000019663	lsm14b	100	75.668	Astatotilapia_calliptera
ENSMAMG00000020539	lsm14b	90	60.167	ENSAMXG00000002865	lsm14b	90	60.167	Astyanax_mexicanus
ENSMAMG00000020539	lsm14b	92	48.276	ENSBTAG00000021558	LSM14B	91	47.132	Bos_taurus
ENSMAMG00000020539	lsm14b	92	54.223	ENSCJAG00000014434	LSM14B	90	52.877	Callithrix_jacchus
ENSMAMG00000020539	lsm14b	82	44.809	ENSCAFG00000012518	LSM14B	89	43.490	Canis_familiaris
ENSMAMG00000020539	lsm14b	92	53.406	ENSCAFG00020022150	LSM14B	90	52.210	Canis_lupus_dingo
ENSMAMG00000020539	lsm14b	98	39.231	ENSCHIG00000022681	-	90	38.655	Capra_hircus
ENSMAMG00000020539	lsm14b	92	53.134	ENSCHIG00000010284	-	90	51.657	Capra_hircus
ENSMAMG00000020539	lsm14b	81	51.070	ENSTSYG00000031914	LSM14B	79	49.689	Carlito_syrichta
ENSMAMG00000020539	lsm14b	81	50.915	ENSCAPG00000013059	LSM14B	89	49.536	Cavia_aperea
ENSMAMG00000020539	lsm14b	81	51.070	ENSCPOG00000038080	LSM14B	89	49.689	Cavia_porcellus
ENSMAMG00000020539	lsm14b	92	38.567	ENSCCAG00000024900	-	76	36.043	Cebus_capucinus
ENSMAMG00000020539	lsm14b	92	54.223	ENSCCAG00000021267	LSM14B	90	53.039	Cebus_capucinus
ENSMAMG00000020539	lsm14b	92	54.595	ENSCATG00000036006	LSM14B	90	53.425	Cercocebus_atys
ENSMAMG00000020539	lsm14b	81	50.617	ENSCLAG00000003186	LSM14B	89	49.216	Chinchilla_lanigera
ENSMAMG00000020539	lsm14b	92	49.389	ENSCSAG00000015729	LSM14B	91	48.267	Chlorocebus_sabaeus
ENSMAMG00000020539	lsm14b	62	34.524	ENSCHOG00000006997	-	86	33.061	Choloepus_hoffmanni
ENSMAMG00000020539	lsm14b	91	49.123	ENSCPBG00000027065	LSM14B	91	47.980	Chrysemys_picta_bellii
ENSMAMG00000020539	lsm14b	81	50.617	ENSCANG00000036986	LSM14B	89	49.689	Colobus_angolensis_palliatus
ENSMAMG00000020539	lsm14b	92	55.586	ENSCGRG00001018399	Lsm14b	90	55.249	Cricetulus_griseus_chok1gshd
ENSMAMG00000020539	lsm14b	54	45.161	ENSCGRG00000002484	-	82	41.589	Cricetulus_griseus_crigri
ENSMAMG00000020539	lsm14b	61	41.958	ENSCGRG00000006111	-	90	41.281	Cricetulus_griseus_crigri
ENSMAMG00000020539	lsm14b	98	45.736	ENSCSEG00000020669	LSM14B	90	44.798	Cynoglossus_semilaevis
ENSMAMG00000020539	lsm14b	100	72.944	ENSCSEG00000004722	lsm14b	100	72.944	Cynoglossus_semilaevis
ENSMAMG00000020539	lsm14b	65	35.887	ENSCVAG00000012433	-	86	33.043	Cyprinodon_variegatus
ENSMAMG00000020539	lsm14b	91	57.618	ENSDARG00000025386	lsm14b	90	57.983	Danio_rerio
ENSMAMG00000020539	lsm14b	61	40.138	ENSDNOG00000025246	LSM14B	88	39.085	Dasypus_novemcinctus
ENSMAMG00000020539	lsm14b	82	51.543	ENSDORG00000016683	Lsm14b	78	51.553	Dipodomys_ordii
ENSMAMG00000020539	lsm14b	57	41.558	ENSETEG00000011188	-	94	40.260	Echinops_telfairi
ENSMAMG00000020539	lsm14b	92	42.308	ENSETEG00000001869	-	89	41.261	Echinops_telfairi
ENSMAMG00000020539	lsm14b	61	44.082	ENSEASG00005023218	LSM14B	85	41.350	Equus_asinus_asinus
ENSMAMG00000020539	lsm14b	92	53.514	ENSECAG00000010659	LSM14B	90	52.603	Equus_caballus
ENSMAMG00000020539	lsm14b	55	65.000	ENSEEUG00000007331	LSM14B	78	65.000	Erinaceus_europaeus
ENSMAMG00000020539	lsm14b	90	52.408	ENSELUG00000016299	LSM14B	90	52.408	Esox_lucius
ENSMAMG00000020539	lsm14b	99	61.282	ENSELUG00000005780	lsm14b	90	61.782	Esox_lucius
ENSMAMG00000020539	lsm14b	92	53.022	ENSFCAG00000003248	LSM14B	90	51.811	Felis_catus
ENSMAMG00000020539	lsm14b	82	44.110	ENSFALG00000010618	LSM14B	90	43.889	Ficedula_albicollis
ENSMAMG00000020539	lsm14b	81	50.153	ENSFDAG00000002214	LSM14B	89	48.758	Fukomys_damarensis
ENSMAMG00000020539	lsm14b	70	49.077	ENSFHEG00000003362	LSM14B	79	45.513	Fundulus_heteroclitus
ENSMAMG00000020539	lsm14b	100	71.658	ENSFHEG00000006237	lsm14b	100	71.658	Fundulus_heteroclitus
ENSMAMG00000020539	lsm14b	100	62.069	ENSGMOG00000017115	lsm14b	100	60.317	Gadus_morhua
ENSMAMG00000020539	lsm14b	91	51.902	ENSGALG00000005125	LSM14B	90	53.203	Gallus_gallus
ENSMAMG00000020539	lsm14b	66	39.130	ENSGAFG00000013723	LSM14B	85	38.158	Gambusia_affinis
ENSMAMG00000020539	lsm14b	100	68.883	ENSGAFG00000020318	lsm14b	100	68.883	Gambusia_affinis
ENSMAMG00000020539	lsm14b	99	72.386	ENSGACG00000009973	lsm14b	99	72.654	Gasterosteus_aculeatus
ENSMAMG00000020539	lsm14b	53	45.116	ENSGAGG00000004106	LSM14B	77	44.286	Gopherus_agassizii
ENSMAMG00000020539	lsm14b	82	50.450	ENSGGOG00000005630	LSM14B	85	49.085	Gorilla_gorilla
ENSMAMG00000020539	lsm14b	92	53.406	ENSHGLG00000015055	LSM14B	90	52.210	Heterocephalus_glaber_female
ENSMAMG00000020539	lsm14b	81	49.844	ENSHGLG00100015273	LSM14B	89	48.418	Heterocephalus_glaber_male
ENSMAMG00000020539	lsm14b	94	46.684	ENSHCOG00000018747	LSM14B	90	44.693	Hippocampus_comes
ENSMAMG00000020539	lsm14b	69	55.939	ENSHCOG00000004867	lsm14b	100	54.406	Hippocampus_comes
ENSMAMG00000020539	lsm14b	90	62.784	ENSIPUG00000014946	lsm14b	85	62.784	Ictalurus_punctatus
ENSMAMG00000020539	lsm14b	81	50.617	ENSSTOG00000020482	LSM14B	89	49.216	Ictidomys_tridecemlineatus
ENSMAMG00000020539	lsm14b	91	54.696	ENSJJAG00000012728	Lsm14b	89	54.622	Jaculus_jaculus
ENSMAMG00000020539	lsm14b	52	41.089	ENSKMAG00000012834	-	86	39.500	Kryptolebias_marmoratus
ENSMAMG00000020539	lsm14b	91	74.487	ENSKMAG00000017524	lsm14b	92	74.487	Kryptolebias_marmoratus
ENSMAMG00000020539	lsm14b	69	39.773	ENSLBEG00000007951	LSM14B	100	35.878	Labrus_bergylta
ENSMAMG00000020539	lsm14b	90	74.648	ENSLACG00000003849	LSM14B	78	74.648	Latimeria_chalumnae
ENSMAMG00000020539	lsm14b	90	58.192	ENSLOCG00000003746	lsm14b	90	58.192	Lepisosteus_oculatus
ENSMAMG00000020539	lsm14b	82	49.085	ENSLAFG00000007492	LSM14B	89	47.988	Loxodonta_africana
ENSMAMG00000020539	lsm14b	92	54.595	ENSMFAG00000041479	LSM14B	90	53.425	Macaca_fascicularis
ENSMAMG00000020539	lsm14b	92	54.595	ENSMMUG00000014084	LSM14B	90	53.425	Macaca_mulatta
ENSMAMG00000020539	lsm14b	92	54.595	ENSMNEG00000045573	LSM14B	90	53.425	Macaca_nemestrina
ENSMAMG00000020539	lsm14b	81	51.376	ENSMLEG00000040895	LSM14B	89	50.000	Mandrillus_leucophaeus
ENSMAMG00000020539	lsm14b	100	75.668	ENSMZEG00005000987	lsm14b	100	75.668	Maylandia_zebra
ENSMAMG00000020539	lsm14b	91	47.222	ENSMZEG00005026001	LSM14B	93	48.442	Maylandia_zebra
ENSMAMG00000020539	lsm14b	82	47.619	ENSMGAG00000005300	LSM14B	89	48.780	Meleagris_gallopavo
ENSMAMG00000020539	lsm14b	92	54.670	ENSMAUG00000020700	Lsm14b	90	54.318	Mesocricetus_auratus
ENSMAMG00000020539	lsm14b	92	54.178	ENSMICG00000014675	LSM14B	90	52.877	Microcebus_murinus
ENSMAMG00000020539	lsm14b	61	41.544	ENSMOCG00000005119	-	90	39.623	Microtus_ochrogaster
ENSMAMG00000020539	lsm14b	92	55.191	ENSMOCG00000020600	Lsm14b	90	55.220	Microtus_ochrogaster
ENSMAMG00000020539	lsm14b	90	51.289	ENSMMOG00000017321	LSM14B	89	49.275	Mola_mola
ENSMAMG00000020539	lsm14b	90	68.421	ENSMMOG00000020042	lsm14b	93	68.421	Mola_mola
ENSMAMG00000020539	lsm14b	61	42.105	ENSMODG00000016690	LSM14B	88	40.357	Monodelphis_domestica
ENSMAMG00000020539	lsm14b	91	48.725	ENSMALG00000022251	LSM14B	89	48.116	Monopterus_albus
ENSMAMG00000020539	lsm14b	100	81.818	ENSMALG00000004783	lsm14b	97	81.818	Monopterus_albus
ENSMAMG00000020539	lsm14b	92	54.121	MGP_CAROLIEiJ_G0024770	Lsm14b	90	53.760	Mus_caroli
ENSMAMG00000020539	lsm14b	92	54.121	ENSMUSG00000039108	Lsm14b	90	53.760	Mus_musculus
ENSMAMG00000020539	lsm14b	92	54.121	MGP_PahariEiJ_G0026214	Lsm14b	90	53.760	Mus_pahari
ENSMAMG00000020539	lsm14b	92	54.121	MGP_SPRETEiJ_G0025693	Lsm14b	90	53.760	Mus_spretus
ENSMAMG00000020539	lsm14b	86	43.045	ENSMPUG00000007584	LSM14B	91	41.995	Mustela_putorius_furo
ENSMAMG00000020539	lsm14b	91	54.167	ENSMLUG00000000304	LSM14B	90	53.056	Myotis_lucifugus
ENSMAMG00000020539	lsm14b	81	51.852	ENSNLEG00000015757	LSM14B	89	50.470	Nomascus_leucogenys
ENSMAMG00000020539	lsm14b	66	70.629	ENSMEUG00000008267	-	65	70.629	Notamacropus_eugenii
ENSMAMG00000020539	lsm14b	92	54.223	ENSODEG00000004099	LSM14B	90	53.039	Octodon_degus
ENSMAMG00000020539	lsm14b	100	76.738	ENSONIG00000020318	lsm14b	100	76.738	Oreochromis_niloticus
ENSMAMG00000020539	lsm14b	74	52.500	ENSOANG00000003370	LSM14B	96	52.500	Ornithorhynchus_anatinus
ENSMAMG00000020539	lsm14b	81	50.152	ENSOCUG00000006279	LSM14B	89	48.457	Oryctolagus_cuniculus
ENSMAMG00000020539	lsm14b	100	72.193	ENSORLG00000013525	lsm14b	100	73.797	Oryzias_latipes
ENSMAMG00000020539	lsm14b	92	42.935	ENSORLG00000028353	LSM14B	90	42.179	Oryzias_latipes
ENSMAMG00000020539	lsm14b	62	32.946	ENSORLG00020018191	-	85	30.924	Oryzias_latipes_hni
ENSMAMG00000020539	lsm14b	100	72.460	ENSORLG00020020553	lsm14b	100	74.064	Oryzias_latipes_hni
ENSMAMG00000020539	lsm14b	100	72.460	ENSORLG00015016862	lsm14b	100	74.064	Oryzias_latipes_hsok
ENSMAMG00000020539	lsm14b	92	42.391	ENSORLG00015013157	LSM14B	90	41.620	Oryzias_latipes_hsok
ENSMAMG00000020539	lsm14b	65	33.878	ENSOMEG00000000171	-	83	33.333	Oryzias_melastigma
ENSMAMG00000020539	lsm14b	100	72.460	ENSOMEG00000023917	lsm14b	100	74.064	Oryzias_melastigma
ENSMAMG00000020539	lsm14b	92	48.655	ENSOGAG00000003915	LSM14B	91	47.525	Otolemur_garnettii
ENSMAMG00000020539	lsm14b	83	43.666	ENSOARG00000014706	LSM14B	88	43.733	Ovis_aries
ENSMAMG00000020539	lsm14b	82	50.450	ENSPPAG00000035799	LSM14B	85	49.085	Pan_paniscus
ENSMAMG00000020539	lsm14b	92	52.747	ENSPPRG00000009197	LSM14B	90	51.532	Panthera_pardus
ENSMAMG00000020539	lsm14b	61	41.564	ENSPTIG00000021518	LSM14B	88	39.916	Panthera_tigris_altaica
ENSMAMG00000020539	lsm14b	92	54.324	ENSPTRG00000013696	LSM14B	90	53.151	Pan_troglodytes
ENSMAMG00000020539	lsm14b	92	54.595	ENSPANG00000011747	LSM14B	90	53.425	Papio_anubis
ENSMAMG00000020539	lsm14b	91	61.582	ENSPKIG00000003275	lsm14b	94	73.585	Paramormyrops_kingsleyae
ENSMAMG00000020539	lsm14b	82	51.227	ENSPSIG00000014762	LSM14B	89	50.156	Pelodiscus_sinensis
ENSMAMG00000020539	lsm14b	91	55.801	ENSPEMG00000017688	Lsm14b	90	55.462	Peromyscus_maniculatus_bairdii
ENSMAMG00000020539	lsm14b	92	54.918	ENSPCIG00000013405	LSM14B	90	53.740	Phascolarctos_cinereus
ENSMAMG00000020539	lsm14b	100	72.267	ENSPFOG00000005631	lsm14b	100	72.267	Poecilia_formosa
ENSMAMG00000020539	lsm14b	89	47.688	ENSPLAG00000005793	LSM14B	89	45.882	Poecilia_latipinna
ENSMAMG00000020539	lsm14b	100	72.267	ENSPLAG00000002449	lsm14b	100	72.267	Poecilia_latipinna
ENSMAMG00000020539	lsm14b	100	72.533	ENSPMEG00000000745	lsm14b	100	72.533	Poecilia_mexicana
ENSMAMG00000020539	lsm14b	88	48.688	ENSPMEG00000022953	LSM14B	89	47.214	Poecilia_mexicana
ENSMAMG00000020539	lsm14b	62	39.216	ENSPREG00000007828	LSM14B	85	37.652	Poecilia_reticulata
ENSMAMG00000020539	lsm14b	92	48.800	ENSPPYG00000011194	LSM14B	90	48.787	Pongo_abelii
ENSMAMG00000020539	lsm14b	92	55.135	ENSPCOG00000013625	LSM14B	90	53.973	Propithecus_coquereli
ENSMAMG00000020539	lsm14b	90	62.678	ENSPNAG00000012777	lsm14b	90	62.963	Pygocentrus_nattereri
ENSMAMG00000020539	lsm14b	92	48.635	ENSRNOG00000054557	Lsm14b	91	48.241	Rattus_norvegicus
ENSMAMG00000020539	lsm14b	81	50.462	ENSRBIG00000033461	LSM14B	88	49.536	Rhinopithecus_bieti
ENSMAMG00000020539	lsm14b	83	51.662	ENSRROG00000042949	LSM14B	81	50.760	Rhinopithecus_roxellana
ENSMAMG00000020539	lsm14b	81	51.235	ENSSBOG00000032820	LSM14B	89	49.843	Saimiri_boliviensis_boliviensis
ENSMAMG00000020539	lsm14b	83	50.909	ENSSHAG00000015528	LSM14B	88	49.231	Sarcophilus_harrisii
ENSMAMG00000020539	lsm14b	90	59.654	ENSSFOG00015004627	lsm14b	91	60.345	Scleropages_formosus
ENSMAMG00000020539	lsm14b	100	77.836	ENSSMAG00000012725	lsm14b	100	77.836	Scophthalmus_maximus
ENSMAMG00000020539	lsm14b	98	47.208	ENSSMAG00000000135	LSM14B	89	48.045	Scophthalmus_maximus
ENSMAMG00000020539	lsm14b	91	49.725	ENSSDUG00000022770	LSM14B	89	49.858	Seriola_dumerili
ENSMAMG00000020539	lsm14b	100	80.902	ENSSDUG00000020977	lsm14b	100	80.902	Seriola_dumerili
ENSMAMG00000020539	lsm14b	62	44.400	ENSSLDG00000011354	-	88	40.909	Seriola_lalandi_dorsalis
ENSMAMG00000020539	lsm14b	53	40.092	ENSSARG00000007749	-	100	39.070	Sorex_araneus
ENSMAMG00000020539	lsm14b	91	49.132	ENSSPUG00000014360	LSM14B	95	50.427	Sphenodon_punctatus
ENSMAMG00000020539	lsm14b	100	75.401	ENSSPAG00000020915	lsm14b	100	75.401	Stegastes_partitus
ENSMAMG00000020539	lsm14b	69	39.502	ENSSPAG00000018854	-	87	36.992	Stegastes_partitus
ENSMAMG00000020539	lsm14b	92	53.279	ENSSSCG00000026052	LSM14B	75	52.078	Sus_scrofa
ENSMAMG00000020539	lsm14b	82	50.613	ENSTGUG00000007884	LSM14B	89	49.221	Taeniopygia_guttata
ENSMAMG00000020539	lsm14b	94	46.329	ENSTRUG00000001529	LSM14B	90	49.573	Takifugu_rubripes
ENSMAMG00000020539	lsm14b	100	74.133	ENSTRUG00000011354	lsm14b	100	74.133	Takifugu_rubripes
ENSMAMG00000020539	lsm14b	100	68.702	ENSTNIG00000002445	lsm14b	100	68.702	Tetraodon_nigroviridis
ENSMAMG00000020539	lsm14b	75	78.571	ENSTTRG00000011043	LSM14B	73	78.571	Tursiops_truncatus
ENSMAMG00000020539	lsm14b	90	47.486	ENSUAMG00000025298	LSM14B	89	46.176	Ursus_americanus
ENSMAMG00000020539	lsm14b	90	47.486	ENSUMAG00000000480	LSM14B	89	46.176	Ursus_maritimus
ENSMAMG00000020539	lsm14b	82	49.847	ENSVVUG00000015920	LSM14B	88	48.447	Vulpes_vulpes
ENSMAMG00000020539	lsm14b	85	53.550	ENSXETG00000001997	lsm14b	99	53.550	Xenopus_tropicalis
ENSMAMG00000020539	lsm14b	100	71.467	ENSXMAG00000010013	lsm14b	100	71.467	Xiphophorus_maculatus