EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000020600 (Gene tree)
Gene ID: 113135060
Gene Symbol: -
Alias: rbfox3
Full Name: -
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 87284 bases
Position: chrOOHQ01000019.1:2108037-2195320
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000030548	Fox-1_C	PF12414.8	2.2e-34	1	1
ENSMAMP00000030548	RRM_1	PF00076.22	9.7e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000031346	-	1035	-	ENSMAMP00000030548	344 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000020600's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000020600's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000020600	-	69	63.910	ENSMAMG00000004293	rbfox2	76	59.011
ENSMAMG00000020600	-	96	63.115	ENSMAMG00000003142	rbfox1	96	67.509
ENSMAMG00000020600	-	90	78.135	ENSMAMG00000019810	rbfox3b	95	77.703
ENSMAMG00000020600	-	69	67.331	ENSMAMG00000019480	rbfox1l	89	55.840
ENSMAMG00000020600	-	76	57.003	ENSMAMG00000008980	-	68	59.236

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000020600	-	85	73.443	ENSG00000167281	RBFOX3	99	73.571	Homo_sapiens
ENSMAMG00000020600	-	98	72.727	ENSAPOG00000015658	-	91	72.434	Acanthochromis_polyacanthus
ENSMAMG00000020600	-	99	78.736	ENSAPOG00000021630	rbfox3b	89	80.368	Acanthochromis_polyacanthus
ENSMAMG00000020600	-	100	68.622	ENSAMEG00000014170	RBFOX3	98	70.694	Ailuropoda_melanoleuca
ENSMAMG00000020600	-	90	80.192	ENSACIG00000010817	rbfox3b	95	80.201	Amphilophus_citrinellus
ENSMAMG00000020600	-	88	82.500	ENSACIG00000003768	-	90	82.500	Amphilophus_citrinellus
ENSMAMG00000020600	-	93	80.308	ENSAOCG00000012358	rbfox3b	89	80.368	Amphiprion_ocellaris
ENSMAMG00000020600	-	94	88.923	ENSAOCG00000010786	-	87	88.923	Amphiprion_ocellaris
ENSMAMG00000020600	-	98	80.716	ENSAPEG00000015891	-	91	80.716	Amphiprion_percula
ENSMAMG00000020600	-	94	75.385	ENSAPEG00000019081	rbfox3b	88	76.000	Amphiprion_percula
ENSMAMG00000020600	-	87	82.353	ENSATEG00000023101	-	94	82.353	Anabas_testudineus
ENSMAMG00000020600	-	90	72.543	ENSATEG00000019945	rbfox3b	95	72.810	Anabas_testudineus
ENSMAMG00000020600	-	93	76.524	ENSACAG00000016093	RBFOX3	91	77.134	Anolis_carolinensis
ENSMAMG00000020600	-	85	72.368	ENSANAG00000023457	RBFOX3	95	75.083	Aotus_nancymaae
ENSMAMG00000020600	-	93	86.196	ENSACLG00000025552	-	89	86.196	Astatotilapia_calliptera
ENSMAMG00000020600	-	99	78.324	ENSACLG00000020011	rbfox3b	95	79.798	Astatotilapia_calliptera
ENSMAMG00000020600	-	94	79.290	ENSAMXG00000037246	rbfox3a	98	81.763	Astyanax_mexicanus
ENSMAMG00000020600	-	93	76.994	ENSAMXG00000042841	rbfox3b	93	76.758	Astyanax_mexicanus
ENSMAMG00000020600	-	74	76.357	ENSBTAG00000006280	RBFOX3	93	57.227	Bos_taurus
ENSMAMG00000020600	-	85	70.470	ENSCJAG00000009563	RBFOX3	88	75.839	Callithrix_jacchus
ENSMAMG00000020600	-	76	75.524	ENSCAFG00000005547	RBFOX3	100	78.445	Canis_familiaris
ENSMAMG00000020600	-	92	64.324	ENSCAFG00020008126	RBFOX3	96	65.768	Canis_lupus_dingo
ENSMAMG00000020600	-	92	64.324	ENSCHIG00000009124	RBFOX3	96	66.038	Capra_hircus
ENSMAMG00000020600	-	85	64.841	ENSTSYG00000029617	RBFOX3	96	65.994	Carlito_syrichta
ENSMAMG00000020600	-	92	65.147	ENSCPOG00000021703	RBFOX3	96	65.714	Cavia_porcellus
ENSMAMG00000020600	-	85	72.368	ENSCCAG00000028450	RBFOX3	95	75.083	Cebus_capucinus
ENSMAMG00000020600	-	85	73.355	ENSCATG00000018349	RBFOX3	95	76.080	Cercocebus_atys
ENSMAMG00000020600	-	92	65.768	ENSCLAG00000006449	RBFOX3	96	66.379	Chinchilla_lanigera
ENSMAMG00000020600	-	85	73.355	ENSCSAG00000002355	RBFOX3	95	76.080	Chlorocebus_sabaeus
ENSMAMG00000020600	-	99	74.074	ENSCPBG00000010904	RBFOX3	98	77.607	Chrysemys_picta_bellii
ENSMAMG00000020600	-	85	73.355	ENSCANG00000043120	RBFOX3	95	76.080	Colobus_angolensis_palliatus
ENSMAMG00000020600	-	92	58.791	ENSCGRG00001019476	Rbfox3	96	65.043	Cricetulus_griseus_chok1gshd
ENSMAMG00000020600	-	92	58.791	ENSCGRG00000003268	Rbfox3	96	65.043	Cricetulus_griseus_crigri
ENSMAMG00000020600	-	93	64.438	ENSCSEG00000020606	RBFOX3	87	65.217	Cynoglossus_semilaevis
ENSMAMG00000020600	-	99	89.143	ENSCSEG00000015567	RBFOX3	96	89.143	Cynoglossus_semilaevis
ENSMAMG00000020600	-	93	80.308	ENSCVAG00000006882	rbfox3b	88	80.615	Cyprinodon_variegatus
ENSMAMG00000020600	-	93	79.580	ENSDARG00000010083	rbfox3a	99	81.763	Danio_rerio
ENSMAMG00000020600	-	92	70.126	ENSDARG00000074310	rbfox3b	97	69.469	Danio_rerio
ENSMAMG00000020600	-	69	67.361	ENSDNOG00000039391	RBFOX3	76	64.360	Dasypus_novemcinctus
ENSMAMG00000020600	-	92	57.838	ENSDORG00000005352	Rbfox3	96	57.838	Dipodomys_ordii
ENSMAMG00000020600	-	100	63.043	ENSEBUG00000002129	RBFOX3	99	64.835	Eptatretus_burgeri
ENSMAMG00000020600	-	77	57.401	ENSEBUG00000013559	RBFOX3	63	60.086	Eptatretus_burgeri
ENSMAMG00000020600	-	85	74.183	ENSEASG00005005059	RBFOX3	95	77.152	Equus_asinus_asinus
ENSMAMG00000020600	-	85	74.593	ENSECAG00000023811	RBFOX3	95	77.483	Equus_caballus
ENSMAMG00000020600	-	76	74.359	ENSEEUG00000013974	RBFOX3	68	74.359	Erinaceus_europaeus
ENSMAMG00000020600	-	99	79.023	ENSELUG00000017963	rbfox3b	91	80.546	Esox_lucius
ENSMAMG00000020600	-	93	74.924	ENSFCAG00000002555	RBFOX3	95	76.412	Felis_catus
ENSMAMG00000020600	-	99	58.561	ENSFALG00000012288	RBFOX3	98	60.750	Ficedula_albicollis
ENSMAMG00000020600	-	92	59.786	ENSFDAG00000007489	RBFOX3	96	60.000	Fukomys_damarensis
ENSMAMG00000020600	-	90	70.382	ENSFHEG00000008550	rbfox3b	95	69.900	Fundulus_heteroclitus
ENSMAMG00000020600	-	96	60.836	ENSGMOG00000019304	-	91	68.371	Gadus_morhua
ENSMAMG00000020600	-	93	75.831	ENSGALG00000032889	RBFOX3	91	78.287	Gallus_gallus
ENSMAMG00000020600	-	94	76.615	ENSGAFG00000005025	rbfox3b	86	79.195	Gambusia_affinis
ENSMAMG00000020600	-	92	72.312	ENSGACG00000002138	-	96	72.312	Gasterosteus_aculeatus
ENSMAMG00000020600	-	100	73.654	ENSGAGG00000020025	RBFOX3	98	76.218	Gopherus_agassizii
ENSMAMG00000020600	-	85	73.355	ENSGGOG00000012546	RBFOX3	95	76.080	Gorilla_gorilla
ENSMAMG00000020600	-	99	84.241	ENSHBUG00000023098	-	98	84.241	Haplochromis_burtoni
ENSMAMG00000020600	-	99	78.324	ENSHBUG00000018099	rbfox3b	88	80.186	Haplochromis_burtoni
ENSMAMG00000020600	-	92	64.800	ENSHGLG00000008679	RBFOX3	96	65.341	Heterocephalus_glaber_female
ENSMAMG00000020600	-	92	61.067	ENSHGLG00100014739	RBFOX3	96	61.067	Heterocephalus_glaber_male
ENSMAMG00000020600	-	93	78.154	ENSHCOG00000001863	RBFOX3	93	77.419	Hippocampus_comes
ENSMAMG00000020600	-	87	72.403	ENSHCOG00000007444	RBFOX3	78	72.549	Hippocampus_comes
ENSMAMG00000020600	-	90	64.118	ENSIPUG00000021966	rbfox3b	93	77.510	Ictalurus_punctatus
ENSMAMG00000020600	-	99	76.685	ENSIPUG00000012010	rbfox3a	98	80.243	Ictalurus_punctatus
ENSMAMG00000020600	-	92	60.923	ENSSTOG00000026817	RBFOX3	95	61.589	Ictidomys_tridecemlineatus
ENSMAMG00000020600	-	92	59.780	ENSJJAG00000014167	Rbfox3	96	65.805	Jaculus_jaculus
ENSMAMG00000020600	-	99	79.429	ENSKMAG00000006726	rbfox3b	94	79.429	Kryptolebias_marmoratus
ENSMAMG00000020600	-	93	89.877	ENSLBEG00000022508	-	89	89.877	Labrus_bergylta
ENSMAMG00000020600	-	99	78.223	ENSLBEG00000004030	rbfox3b	95	80.471	Labrus_bergylta
ENSMAMG00000020600	-	99	68.354	ENSLACG00000018409	-	100	68.354	Latimeria_chalumnae
ENSMAMG00000020600	-	53	58.602	ENSLACG00000000021	-	95	58.696	Latimeria_chalumnae
ENSMAMG00000020600	-	93	82.121	ENSLOCG00000012267	rbfox3a	98	84.356	Lepisosteus_oculatus
ENSMAMG00000020600	-	100	68.448	ENSLAFG00000016623	RBFOX3	99	68.448	Loxodonta_africana
ENSMAMG00000020600	-	92	64.972	ENSMFAG00000002247	RBFOX3	96	65.994	Macaca_fascicularis
ENSMAMG00000020600	-	85	73.355	ENSMMUG00000023028	RBFOX3	95	76.080	Macaca_mulatta
ENSMAMG00000020600	-	85	73.684	ENSMNEG00000041147	RBFOX3	95	76.412	Macaca_nemestrina
ENSMAMG00000020600	-	85	73.355	ENSMLEG00000025686	RBFOX3	95	76.080	Mandrillus_leucophaeus
ENSMAMG00000020600	-	91	68.713	ENSMZEG00005003055	-	79	71.914	Maylandia_zebra
ENSMAMG00000020600	-	99	78.324	ENSMZEG00005000781	rbfox3b	89	79.938	Maylandia_zebra
ENSMAMG00000020600	-	63	78.281	ENSMGAG00000005600	RBFOX3	83	78.733	Meleagris_gallopavo
ENSMAMG00000020600	-	92	64.247	ENSMAUG00000013543	Rbfox3	96	64.756	Mesocricetus_auratus
ENSMAMG00000020600	-	93	72.508	ENSMICG00000014898	RBFOX3	96	76.080	Microcebus_murinus
ENSMAMG00000020600	-	92	63.978	ENSMOCG00000015373	Rbfox3	96	65.903	Microtus_ochrogaster
ENSMAMG00000020600	-	99	73.538	ENSMMOG00000020193	rbfox3b	98	73.538	Mola_mola
ENSMAMG00000020600	-	93	74.545	ENSMODG00000002089	RBFOX3	90	77.064	Monodelphis_domestica
ENSMAMG00000020600	-	99	87.679	ENSMALG00000018270	-	92	88.294	Monopterus_albus
ENSMAMG00000020600	-	93	79.385	ENSMALG00000020407	rbfox3b	89	79.448	Monopterus_albus
ENSMAMG00000020600	-	92	72.036	MGP_CAROLIEiJ_G0017487	Rbfox3	99	85.417	Mus_caroli
ENSMAMG00000020600	-	92	73.846	ENSMUSG00000025576	Rbfox3	99	85.417	Mus_musculus
ENSMAMG00000020600	-	92	71.818	MGP_PahariEiJ_G0018614	Rbfox3	99	86.111	Mus_pahari
ENSMAMG00000020600	-	92	72.340	MGP_SPRETEiJ_G0018331	Rbfox3	99	85.417	Mus_spretus
ENSMAMG00000020600	-	99	67.519	ENSMPUG00000012319	RBFOX3	98	69.588	Mustela_putorius_furo
ENSMAMG00000020600	-	92	64.151	ENSNGAG00000018006	Rbfox3	96	66.092	Nannospalax_galili
ENSMAMG00000020600	-	93	79.193	ENSNBRG00000010102	rbfox3b	88	79.503	Neolamprologus_brichardi
ENSMAMG00000020600	-	94	83.282	ENSNBRG00000022885	-	90	83.282	Neolamprologus_brichardi
ENSMAMG00000020600	-	90	53.165	ENSNLEG00000000153	-	93	54.485	Nomascus_leucogenys
ENSMAMG00000020600	-	85	50.291	ENSMEUG00000004218	-	96	50.872	Notamacropus_eugenii
ENSMAMG00000020600	-	70	75.773	ENSOPRG00000016279	-	75	75.773	Ochotona_princeps
ENSMAMG00000020600	-	85	76.744	ENSODEG00000009433	RBFOX3	95	76.744	Octodon_degus
ENSMAMG00000020600	-	93	85.846	ENSONIG00000007282	-	95	85.846	Oreochromis_niloticus
ENSMAMG00000020600	-	93	80.000	ENSONIG00000009549	rbfox3b	88	80.308	Oreochromis_niloticus
ENSMAMG00000020600	-	99	78.161	ENSORLG00000000905	rbfox3b	70	79.205	Oryzias_latipes
ENSMAMG00000020600	-	99	78.161	ENSORLG00020018030	rbfox3b	98	70.462	Oryzias_latipes_hni
ENSMAMG00000020600	-	99	75.068	ENSORLG00015009200	rbfox3b	98	70.769	Oryzias_latipes_hsok
ENSMAMG00000020600	-	73	77.323	ENSOMEG00000014677	rbfox3b	74	77.580	Oryzias_melastigma
ENSMAMG00000020600	-	99	70.811	ENSOGAG00000029595	RBFOX3	97	73.025	Otolemur_garnettii
ENSMAMG00000020600	-	65	65.639	ENSOARG00000002908	RBFOX3	100	54.791	Ovis_aries
ENSMAMG00000020600	-	74	74.806	ENSPPAG00000025383	RBFOX3	94	75.182	Pan_paniscus
ENSMAMG00000020600	-	85	65.000	ENSPPRG00000007819	RBFOX3	96	67.449	Panthera_pardus
ENSMAMG00000020600	-	85	73.355	ENSPTRG00000009727	RBFOX3	95	76.080	Pan_troglodytes
ENSMAMG00000020600	-	85	73.355	ENSPANG00000019837	RBFOX3	95	76.080	Papio_anubis
ENSMAMG00000020600	-	99	63.610	ENSPKIG00000022633	-	92	63.610	Paramormyrops_kingsleyae
ENSMAMG00000020600	-	100	82.436	ENSPKIG00000010299	rbfox3a	92	82.436	Paramormyrops_kingsleyae
ENSMAMG00000020600	-	77	81.818	ENSPMGG00000008000	rbfox3b	82	81.818	Periophthalmus_magnuspinnatus
ENSMAMG00000020600	-	92	59.341	ENSPEMG00000010500	Rbfox3	96	65.616	Peromyscus_maniculatus_bairdii
ENSMAMG00000020600	-	57	65.438	ENSPMAG00000008689	rbfox3b	99	68.545	Petromyzon_marinus
ENSMAMG00000020600	-	93	67.112	ENSPCIG00000005766	RBFOX3	97	67.112	Phascolarctos_cinereus
ENSMAMG00000020600	-	99	78.736	ENSPFOG00000018294	rbfox3b	88	79.023	Poecilia_formosa
ENSMAMG00000020600	-	76	84.291	ENSPLAG00000000481	rbfox3b	78	84.291	Poecilia_latipinna
ENSMAMG00000020600	-	90	70.701	ENSPMEG00000022997	rbfox3b	95	70.234	Poecilia_mexicana
ENSMAMG00000020600	-	94	79.635	ENSPREG00000012886	rbfox3b	93	80.428	Poecilia_reticulata
ENSMAMG00000020600	-	99	63.793	ENSPPYG00000008704	RBFOX3	100	65.242	Pongo_abelii
ENSMAMG00000020600	-	85	63.006	ENSPCAG00000001401	RBFOX3	96	65.896	Procavia_capensis
ENSMAMG00000020600	-	90	64.641	ENSPCOG00000012689	RBFOX3	97	65.994	Propithecus_coquereli
ENSMAMG00000020600	-	85	55.043	ENSPVAG00000015243	RBFOX3	96	58.790	Pteropus_vampyrus
ENSMAMG00000020600	-	96	82.934	ENSPNYG00000009079	-	88	82.934	Pundamilia_nyererei
ENSMAMG00000020600	-	94	73.148	ENSPNYG00000010414	rbfox3b	88	73.148	Pundamilia_nyererei
ENSMAMG00000020600	-	92	65.079	ENSPNAG00000018173	rbfox3b	88	66.667	Pygocentrus_nattereri
ENSMAMG00000020600	-	99	78.151	ENSPNAG00000002889	rbfox3a	89	81.818	Pygocentrus_nattereri
ENSMAMG00000020600	-	85	73.290	ENSRNOG00000003386	Rbfox3	95	76.238	Rattus_norvegicus
ENSMAMG00000020600	-	93	74.018	ENSRBIG00000040449	RBFOX3	91	76.524	Rhinopithecus_bieti
ENSMAMG00000020600	-	85	73.355	ENSRROG00000000766	RBFOX3	95	76.080	Rhinopithecus_roxellana
ENSMAMG00000020600	-	85	72.368	ENSSBOG00000031591	RBFOX3	95	75.083	Saimiri_boliviensis_boliviensis
ENSMAMG00000020600	-	99	66.253	ENSSHAG00000016076	RBFOX3	100	66.501	Sarcophilus_harrisii
ENSMAMG00000020600	-	99	79.603	ENSSFOG00015023260	rbfox3a	98	73.926	Scleropages_formosus
ENSMAMG00000020600	-	93	66.159	ENSSFOG00015004716	RBFOX3	92	68.098	Scleropages_formosus
ENSMAMG00000020600	-	99	74.521	ENSSMAG00000012618	rbfox3b	77	76.608	Scophthalmus_maximus
ENSMAMG00000020600	-	93	86.154	ENSSMAG00000019052	-	95	85.570	Scophthalmus_maximus
ENSMAMG00000020600	-	90	70.382	ENSSDUG00000023183	rbfox3b	95	69.900	Seriola_dumerili
ENSMAMG00000020600	-	99	85.345	ENSSDUG00000015801	-	96	85.591	Seriola_dumerili
ENSMAMG00000020600	-	93	80.000	ENSSLDG00000000149	rbfox3b	89	80.061	Seriola_lalandi_dorsalis
ENSMAMG00000020600	-	99	93.878	ENSSLDG00000016098	-	97	93.878	Seriola_lalandi_dorsalis
ENSMAMG00000020600	-	85	75.000	ENSSPUG00000011733	RBFOX3	95	77.483	Sphenodon_punctatus
ENSMAMG00000020600	-	82	82.105	ENSSPAG00000004898	-	85	82.105	Stegastes_partitus
ENSMAMG00000020600	-	94	75.385	ENSSPAG00000017571	rbfox3b	88	75.692	Stegastes_partitus
ENSMAMG00000020600	-	77	77.256	ENSSSCG00000039498	RBFOX3	100	66.959	Sus_scrofa
ENSMAMG00000020600	-	99	72.853	ENSTRUG00000004894	rbfox3b	97	72.853	Takifugu_rubripes
ENSMAMG00000020600	-	100	68.170	ENSTNIG00000011278	rbfox3b	99	68.421	Tetraodon_nigroviridis
ENSMAMG00000020600	-	92	44.414	ENSTBEG00000004296	-	96	44.414	Tupaia_belangeri
ENSMAMG00000020600	-	85	59.249	ENSTTRG00000003676	RBFOX3	96	61.383	Tursiops_truncatus
ENSMAMG00000020600	-	85	74.671	ENSUAMG00000004668	RBFOX3	95	77.409	Ursus_americanus
ENSMAMG00000020600	-	99	74.011	ENSVVUG00000017864	RBFOX3	95	77.076	Vulpes_vulpes
ENSMAMG00000020600	-	99	57.143	ENSXETG00000020236	rbfox3	98	60.256	Xenopus_tropicalis
ENSMAMG00000020600	-	93	79.385	ENSXCOG00000018262	rbfox3b	95	79.932	Xiphophorus_couchianus
ENSMAMG00000020600	-	99	78.448	ENSXMAG00000012939	rbfox3b	88	80.308	Xiphophorus_maculatus