EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000020676 (Gene tree)
Gene ID: 113141787
Gene Symbol: rtcb
Alias: zgc:76871
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 3902 bases
Position: chrOOHQ01000056.1:15863710-15867611
Accession: 113141787
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000030664	RtcB	PF01139.17	3.1e-146	1	1
ENSMAMP00000030669	RtcB	PF01139.17	1.1e-132	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000031469	-	1605	-	ENSMAMP00000030669	534 (aa)	-	-
ENSMAMT00000031464	-	1518	-	ENSMAMP00000030664	505 (aa)	XP_026182113	UPI000E45ACE8

Gene Model

Click here to download ENSMAMG00000020676's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000020676's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000020676	rtcb	100	94.455	ENSG00000100220	RTCB	100	94.455	Homo_sapiens
ENSMAMG00000020676	rtcb	100	97.822	ENSAPOG00000006040	rtcb	100	97.822	Acanthochromis_polyacanthus
ENSMAMG00000020676	rtcb	100	94.455	ENSAMEG00000016152	RTCB	100	94.455	Ailuropoda_melanoleuca
ENSMAMG00000020676	rtcb	100	92.673	ENSACIG00000009083	rtcb	100	92.673	Amphilophus_citrinellus
ENSMAMG00000020676	rtcb	100	98.020	ENSAOCG00000005662	rtcb	100	98.478	Amphiprion_ocellaris
ENSMAMG00000020676	rtcb	96	93.224	ENSAPEG00000024653	rtcb	100	93.224	Amphiprion_percula
ENSMAMG00000020676	rtcb	100	98.020	ENSAPEG00000024701	rtcb	100	98.020	Amphiprion_percula
ENSMAMG00000020676	rtcb	100	98.020	ENSATEG00000000618	rtcb	100	98.020	Anabas_testudineus
ENSMAMG00000020676	rtcb	100	91.715	ENSACAG00000014817	RTCB	100	91.715	Anolis_carolinensis
ENSMAMG00000020676	rtcb	72	97.222	ENSANAG00000023724	-	84	97.222	Aotus_nancymaae
ENSMAMG00000020676	rtcb	100	79.406	ENSANAG00000018191	-	91	79.406	Aotus_nancymaae
ENSMAMG00000020676	rtcb	100	95.842	ENSACLG00000008367	rtcb	100	96.739	Astatotilapia_calliptera
ENSMAMG00000020676	rtcb	100	96.040	ENSAMXG00000042320	rtcb	100	96.040	Astyanax_mexicanus
ENSMAMG00000020676	rtcb	100	94.851	ENSBTAG00000011070	RTCB	100	94.851	Bos_taurus
ENSMAMG00000020676	rtcb	100	74.257	WBGene00008877	rtcb-1	100	74.257	Caenorhabditis_elegans
ENSMAMG00000020676	rtcb	100	94.257	ENSCJAG00000006128	RTCB	100	94.257	Callithrix_jacchus
ENSMAMG00000020676	rtcb	100	94.455	ENSCAFG00000001785	RTCB	100	94.455	Canis_familiaris
ENSMAMG00000020676	rtcb	100	90.495	ENSCAFG00000010789	-	100	90.495	Canis_familiaris
ENSMAMG00000020676	rtcb	87	90.455	ENSCAFG00020018953	-	99	90.455	Canis_lupus_dingo
ENSMAMG00000020676	rtcb	100	94.455	ENSCAFG00020004890	-	100	94.455	Canis_lupus_dingo
ENSMAMG00000020676	rtcb	100	94.653	ENSCHIG00000027009	-	100	94.653	Capra_hircus
ENSMAMG00000020676	rtcb	100	94.257	ENSTSYG00000012320	RTCB	100	94.257	Carlito_syrichta
ENSMAMG00000020676	rtcb	94	94.549	ENSCAPG00000011647	RTCB	96	94.549	Cavia_aperea
ENSMAMG00000020676	rtcb	100	94.257	ENSCCAG00000000618	RTCB	100	94.257	Cebus_capucinus
ENSMAMG00000020676	rtcb	100	94.455	ENSCATG00000033424	RTCB	100	94.455	Cercocebus_atys
ENSMAMG00000020676	rtcb	100	94.455	ENSCLAG00000007997	RTCB	100	94.455	Chinchilla_lanigera
ENSMAMG00000020676	rtcb	100	94.257	ENSCSAG00000008351	RTCB	100	94.257	Chlorocebus_sabaeus
ENSMAMG00000020676	rtcb	100	80.594	ENSCHOG00000009123	RTCB	100	80.594	Choloepus_hoffmanni
ENSMAMG00000020676	rtcb	100	93.465	ENSCPBG00000023184	RTCB	100	93.465	Chrysemys_picta_bellii
ENSMAMG00000020676	rtcb	100	82.376	ENSCING00000003830	-	100	82.376	Ciona_intestinalis
ENSMAMG00000020676	rtcb	100	82.574	ENSCSAVG00000008124	-	100	81.777	Ciona_savignyi
ENSMAMG00000020676	rtcb	100	90.693	ENSCANG00000001891	RTCB	97	93.843	Colobus_angolensis_palliatus
ENSMAMG00000020676	rtcb	100	94.455	ENSCGRG00001011173	Rtcb	100	94.455	Cricetulus_griseus_chok1gshd
ENSMAMG00000020676	rtcb	93	95.319	ENSCGRG00000009587	-	96	95.319	Cricetulus_griseus_crigri
ENSMAMG00000020676	rtcb	100	96.634	ENSCSEG00000003986	rtcb	100	96.634	Cynoglossus_semilaevis
ENSMAMG00000020676	rtcb	82	96.394	ENSCVAG00000000569	rtcb	93	98.529	Cyprinodon_variegatus
ENSMAMG00000020676	rtcb	100	96.634	ENSDARG00000101047	rtcb	100	96.634	Danio_rerio
ENSMAMG00000020676	rtcb	80	90.663	ENSDNOG00000012425	RTCB	99	90.663	Dasypus_novemcinctus
ENSMAMG00000020676	rtcb	100	94.455	ENSDORG00000010855	Rtcb	100	94.455	Dipodomys_ordii
ENSMAMG00000020676	rtcb	99	85.288	FBgn0032781	RtcB	99	85.288	Drosophila_melanogaster
ENSMAMG00000020676	rtcb	100	88.515	ENSETEG00000001988	RTCB	100	88.515	Echinops_telfairi
ENSMAMG00000020676	rtcb	100	85.743	ENSEBUG00000014235	rtcb	100	85.743	Eptatretus_burgeri
ENSMAMG00000020676	rtcb	100	94.653	ENSEASG00005019059	RTCB	100	94.653	Equus_asinus_asinus
ENSMAMG00000020676	rtcb	100	94.653	ENSECAG00000023998	RTCB	100	94.653	Equus_caballus
ENSMAMG00000020676	rtcb	89	85.682	ENSEEUG00000006251	RTCB	100	85.682	Erinaceus_europaeus
ENSMAMG00000020676	rtcb	100	83.176	ENSELUG00000009275	rtcb	100	83.176	Esox_lucius
ENSMAMG00000020676	rtcb	100	94.455	ENSFCAG00000026480	RTCB	100	94.455	Felis_catus
ENSMAMG00000020676	rtcb	100	95.248	ENSFALG00000013334	RTCB	100	95.248	Ficedula_albicollis
ENSMAMG00000020676	rtcb	100	94.257	ENSFDAG00000018150	RTCB	100	94.257	Fukomys_damarensis
ENSMAMG00000020676	rtcb	100	97.030	ENSFHEG00000009595	rtcb	100	97.030	Fundulus_heteroclitus
ENSMAMG00000020676	rtcb	100	92.673	ENSGMOG00000018882	rtcb	100	92.673	Gadus_morhua
ENSMAMG00000020676	rtcb	100	94.653	ENSGALG00000012611	RTCB	100	94.653	Gallus_gallus
ENSMAMG00000020676	rtcb	100	97.030	ENSGAFG00000004198	rtcb	100	97.030	Gambusia_affinis
ENSMAMG00000020676	rtcb	100	96.040	ENSGACG00000000586	rtcb	100	96.040	Gasterosteus_aculeatus
ENSMAMG00000020676	rtcb	93	92.553	ENSGAGG00000019133	RTCB	98	92.569	Gopherus_agassizii
ENSMAMG00000020676	rtcb	100	94.455	ENSGGOG00000011402	RTCB	100	94.455	Gorilla_gorilla
ENSMAMG00000020676	rtcb	100	95.842	ENSHBUG00000020571	rtcb	100	95.842	Haplochromis_burtoni
ENSMAMG00000020676	rtcb	100	94.257	ENSHGLG00000004492	RTCB	100	94.257	Heterocephalus_glaber_female
ENSMAMG00000020676	rtcb	93	68.443	ENSHGLG00000001066	-	99	68.443	Heterocephalus_glaber_female
ENSMAMG00000020676	rtcb	100	94.257	ENSHGLG00100008965	RTCB	100	94.257	Heterocephalus_glaber_male
ENSMAMG00000020676	rtcb	100	94.477	ENSHCOG00000006450	rtcb	100	94.477	Hippocampus_comes
ENSMAMG00000020676	rtcb	100	95.050	ENSIPUG00000015443	rtcb	100	95.050	Ictalurus_punctatus
ENSMAMG00000020676	rtcb	100	94.257	ENSSTOG00000003878	RTCB	100	94.257	Ictidomys_tridecemlineatus
ENSMAMG00000020676	rtcb	100	94.653	ENSJJAG00000010667	Rtcb	100	94.653	Jaculus_jaculus
ENSMAMG00000020676	rtcb	100	97.624	ENSKMAG00000013178	rtcb	100	97.624	Kryptolebias_marmoratus
ENSMAMG00000020676	rtcb	100	95.248	ENSLBEG00000000214	rtcb	100	95.248	Labrus_bergylta
ENSMAMG00000020676	rtcb	100	96.436	ENSLBEG00000010566	RTCB	100	96.436	Labrus_bergylta
ENSMAMG00000020676	rtcb	100	94.257	ENSLACG00000013033	RTCB	100	94.257	Latimeria_chalumnae
ENSMAMG00000020676	rtcb	100	96.040	ENSLOCG00000016515	rtcb	99	96.040	Lepisosteus_oculatus
ENSMAMG00000020676	rtcb	100	93.861	ENSLAFG00000002082	RTCB	100	93.861	Loxodonta_africana
ENSMAMG00000020676	rtcb	100	94.257	ENSMFAG00000034419	RTCB	100	94.257	Macaca_fascicularis
ENSMAMG00000020676	rtcb	100	94.257	ENSMMUG00000006720	RTCB	100	94.257	Macaca_mulatta
ENSMAMG00000020676	rtcb	100	94.257	ENSMNEG00000040669	RTCB	100	94.257	Macaca_nemestrina
ENSMAMG00000020676	rtcb	100	94.455	ENSMLEG00000040505	RTCB	100	94.455	Mandrillus_leucophaeus
ENSMAMG00000020676	rtcb	100	95.842	ENSMZEG00005018942	rtcb	100	95.842	Maylandia_zebra
ENSMAMG00000020676	rtcb	100	94.280	ENSMGAG00000012805	RTCB	100	94.280	Meleagris_gallopavo
ENSMAMG00000020676	rtcb	60	99.115	ENSMAUG00000008301	Rtcb	100	99.115	Mesocricetus_auratus
ENSMAMG00000020676	rtcb	100	75.248	ENSMICG00000036677	-	100	75.248	Microcebus_murinus
ENSMAMG00000020676	rtcb	100	94.257	ENSMICG00000013303	-	100	94.257	Microcebus_murinus
ENSMAMG00000020676	rtcb	100	94.851	ENSMOCG00000002440	Rtcb	100	94.851	Microtus_ochrogaster
ENSMAMG00000020676	rtcb	100	97.624	ENSMMOG00000005987	rtcb	100	97.624	Mola_mola
ENSMAMG00000020676	rtcb	100	94.851	ENSMODG00000001414	RTCB	100	94.851	Monodelphis_domestica
ENSMAMG00000020676	rtcb	100	97.624	ENSMALG00000007603	rtcb	100	97.624	Monopterus_albus
ENSMAMG00000020676	rtcb	100	94.455	MGP_CAROLIEiJ_G0015689	Rtcb	100	94.455	Mus_caroli
ENSMAMG00000020676	rtcb	100	94.455	ENSMUSG00000001783	Rtcb	100	94.455	Mus_musculus
ENSMAMG00000020676	rtcb	100	94.455	MGP_PahariEiJ_G0031396	Rtcb	100	94.455	Mus_pahari
ENSMAMG00000020676	rtcb	100	94.455	MGP_SPRETEiJ_G0016507	Rtcb	100	94.455	Mus_spretus
ENSMAMG00000020676	rtcb	100	94.455	ENSMPUG00000012285	RTCB	100	94.455	Mustela_putorius_furo
ENSMAMG00000020676	rtcb	100	91.716	ENSMLUG00000007803	RTCB	100	91.716	Myotis_lucifugus
ENSMAMG00000020676	rtcb	72	100.000	ENSNGAG00000005093	Rtcb	100	100.000	Nannospalax_galili
ENSMAMG00000020676	rtcb	100	95.842	ENSNBRG00000017202	rtcb	100	95.842	Neolamprologus_brichardi
ENSMAMG00000020676	rtcb	100	94.455	ENSNLEG00000004960	RTCB	100	94.455	Nomascus_leucogenys
ENSMAMG00000020676	rtcb	100	70.693	ENSMEUG00000007809	-	100	70.693	Notamacropus_eugenii
ENSMAMG00000020676	rtcb	73	100.000	ENSOPRG00000003488	RTCB	79	100.000	Ochotona_princeps
ENSMAMG00000020676	rtcb	82	99.057	ENSODEG00000013033	-	100	99.057	Octodon_degus
ENSMAMG00000020676	rtcb	100	62.970	ENSODEG00000005042	-	100	62.970	Octodon_degus
ENSMAMG00000020676	rtcb	100	96.436	ENSONIG00000007474	rtcb	100	96.436	Oreochromis_niloticus
ENSMAMG00000020676	rtcb	100	94.455	ENSOANG00000005524	RTCB	100	94.455	Ornithorhynchus_anatinus
ENSMAMG00000020676	rtcb	93	94.043	ENSOCUG00000008270	RTCB	99	91.393	Oryctolagus_cuniculus
ENSMAMG00000020676	rtcb	100	96.832	ENSORLG00000020093	rtcb	100	96.832	Oryzias_latipes
ENSMAMG00000020676	rtcb	100	96.832	ENSORLG00020003706	rtcb	100	96.832	Oryzias_latipes_hni
ENSMAMG00000020676	rtcb	100	97.030	ENSORLG00015002968	rtcb	100	97.030	Oryzias_latipes_hsok
ENSMAMG00000020676	rtcb	100	97.030	ENSOMEG00000021278	rtcb	100	97.030	Oryzias_melastigma
ENSMAMG00000020676	rtcb	100	93.663	ENSOGAG00000001425	RTCB	100	93.663	Otolemur_garnettii
ENSMAMG00000020676	rtcb	100	94.653	ENSOARG00000018008	RTCB	100	94.653	Ovis_aries
ENSMAMG00000020676	rtcb	100	94.455	ENSPPAG00000028667	RTCB	100	94.455	Pan_paniscus
ENSMAMG00000020676	rtcb	100	94.455	ENSPPRG00000004038	RTCB	100	94.455	Panthera_pardus
ENSMAMG00000020676	rtcb	94	90.316	ENSPTIG00000020499	RTCB	97	91.368	Panthera_tigris_altaica
ENSMAMG00000020676	rtcb	100	94.455	ENSPTRG00000014287	RTCB	100	94.455	Pan_troglodytes
ENSMAMG00000020676	rtcb	100	94.257	ENSPANG00000016035	RTCB	100	94.257	Papio_anubis
ENSMAMG00000020676	rtcb	100	95.248	ENSPKIG00000001881	rtcb	100	95.248	Paramormyrops_kingsleyae
ENSMAMG00000020676	rtcb	91	94.565	ENSPSIG00000011690	RTCB	100	94.565	Pelodiscus_sinensis
ENSMAMG00000020676	rtcb	100	97.624	ENSPMGG00000016672	rtcb	100	97.624	Periophthalmus_magnuspinnatus
ENSMAMG00000020676	rtcb	100	94.455	ENSPEMG00000019548	Rtcb	100	94.455	Peromyscus_maniculatus_bairdii
ENSMAMG00000020676	rtcb	100	90.891	ENSPMAG00000005657	rtcb	100	90.891	Petromyzon_marinus
ENSMAMG00000020676	rtcb	100	94.851	ENSPCIG00000009467	RTCB	100	94.851	Phascolarctos_cinereus
ENSMAMG00000020676	rtcb	100	97.426	ENSPFOG00000003058	rtcb	100	97.426	Poecilia_formosa
ENSMAMG00000020676	rtcb	100	97.228	ENSPLAG00000017663	rtcb	100	97.228	Poecilia_latipinna
ENSMAMG00000020676	rtcb	100	97.426	ENSPMEG00000006227	rtcb	100	97.426	Poecilia_mexicana
ENSMAMG00000020676	rtcb	100	96.832	ENSPREG00000018467	rtcb	100	96.832	Poecilia_reticulata
ENSMAMG00000020676	rtcb	100	94.455	ENSPPYG00000011752	RTCB	100	94.455	Pongo_abelii
ENSMAMG00000020676	rtcb	93	77.542	ENSPCAG00000013641	RTCB	100	77.542	Procavia_capensis
ENSMAMG00000020676	rtcb	100	94.455	ENSPCOG00000017243	RTCB	100	94.455	Propithecus_coquereli
ENSMAMG00000020676	rtcb	93	93.191	ENSPVAG00000002380	RTCB	100	93.191	Pteropus_vampyrus
ENSMAMG00000020676	rtcb	100	95.842	ENSPNYG00000022760	rtcb	100	95.842	Pundamilia_nyererei
ENSMAMG00000020676	rtcb	100	95.644	ENSPNAG00000009209	rtcb	100	95.644	Pygocentrus_nattereri
ENSMAMG00000020676	rtcb	100	94.455	ENSRNOG00000004813	Rtcb	100	94.455	Rattus_norvegicus
ENSMAMG00000020676	rtcb	100	86.364	ENSRBIG00000042090	RTCB	100	86.364	Rhinopithecus_bieti
ENSMAMG00000020676	rtcb	100	89.505	ENSSBOG00000020085	-	100	89.505	Saimiri_boliviensis_boliviensis
ENSMAMG00000020676	rtcb	94	95.148	ENSSHAG00000016277	RTCB	100	95.148	Sarcophilus_harrisii
ENSMAMG00000020676	rtcb	100	95.050	ENSSFOG00015000763	rtcb	100	95.050	Scleropages_formosus
ENSMAMG00000020676	rtcb	100	93.663	ENSSFOG00015011572	RTCB	100	93.663	Scleropages_formosus
ENSMAMG00000020676	rtcb	100	93.663	ENSSMAG00000005096	rtcb	100	93.663	Scophthalmus_maximus
ENSMAMG00000020676	rtcb	100	97.426	ENSSDUG00000012605	rtcb	100	97.426	Seriola_dumerili
ENSMAMG00000020676	rtcb	100	97.624	ENSSLDG00000019458	rtcb	100	97.624	Seriola_lalandi_dorsalis
ENSMAMG00000020676	rtcb	66	100.000	ENSSARG00000004799	-	70	100.000	Sorex_araneus
ENSMAMG00000020676	rtcb	100	93.465	ENSSPUG00000012814	RTCB	100	93.465	Sphenodon_punctatus
ENSMAMG00000020676	rtcb	100	98.020	ENSSPAG00000004623	rtcb	100	98.020	Stegastes_partitus
ENSMAMG00000020676	rtcb	100	94.455	ENSSSCG00000000158	RTCB	100	94.455	Sus_scrofa
ENSMAMG00000020676	rtcb	100	95.248	ENSTGUG00000010947	RTCB	99	95.248	Taeniopygia_guttata
ENSMAMG00000020676	rtcb	91	97.174	ENSTRUG00000009880	rtcb	100	97.174	Takifugu_rubripes
ENSMAMG00000020676	rtcb	100	95.248	ENSTNIG00000002484	rtcb	100	95.248	Tetraodon_nigroviridis
ENSMAMG00000020676	rtcb	100	81.782	ENSTBEG00000004418	RTCB	100	81.782	Tupaia_belangeri
ENSMAMG00000020676	rtcb	93	93.191	ENSTTRG00000006417	RTCB	100	93.191	Tursiops_truncatus
ENSMAMG00000020676	rtcb	100	94.455	ENSUAMG00000022792	RTCB	100	94.455	Ursus_americanus
ENSMAMG00000020676	rtcb	100	94.455	ENSUMAG00000017225	RTCB	100	94.455	Ursus_maritimus
ENSMAMG00000020676	rtcb	100	94.257	ENSVPAG00000005375	RTCB	100	94.257	Vicugna_pacos
ENSMAMG00000020676	rtcb	100	94.455	ENSVVUG00000023408	RTCB	100	94.840	Vulpes_vulpes
ENSMAMG00000020676	rtcb	100	94.257	ENSXETG00000011523	rtcb	100	94.257	Xenopus_tropicalis
ENSMAMG00000020676	rtcb	100	97.426	ENSXMAG00000002855	rtcb	100	97.426	Xiphophorus_maculatus