EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000020735 (Gene tree)
Gene ID: 113139365
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 3051 bases
Position: chrOOHQ01000039.1:15169302-15172352
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000030756	HABP4_PAI-RBP1	PF04774.15	1.2e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000031559	-	1274	-	ENSMAMP00000030756	369 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000020735's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000020735's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000020735	-	96	36.364	ENSMAMG00000018229	serbp1a	99	37.093
ENSMAMG00000020735	-	96	34.532	ENSMAMG00000001591	serbp1b	99	35.854

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000020735	-	98	70.652	ENSAPOG00000018926	-	100	70.380	Acanthochromis_polyacanthus
ENSMAMG00000020735	-	99	73.262	ENSAOCG00000011621	-	100	72.973	Amphiprion_ocellaris
ENSMAMG00000020735	-	98	73.784	ENSAPEG00000006355	-	100	73.098	Amphiprion_percula
ENSMAMG00000020735	-	97	41.555	ENSAMXG00000000297	-	96	40.885	Astyanax_mexicanus
ENSMAMG00000020735	-	98	66.667	ENSCSEG00000017753	-	100	66.938	Cynoglossus_semilaevis
ENSMAMG00000020735	-	93	58.791	ENSGAFG00000012163	-	97	59.341	Gambusia_affinis
ENSMAMG00000020735	-	57	42.411	ENSMODG00000000514	-	51	42.534	Monodelphis_domestica
ENSMAMG00000020735	-	97	47.778	ENSPMGG00000017136	-	99	47.500	Periophthalmus_magnuspinnatus
ENSMAMG00000020735	-	98	70.745	ENSSMAG00000003212	-	100	71.277	Scophthalmus_maximus
ENSMAMG00000020735	-	98	72.823	ENSSDUG00000002625	-	100	74.142	Seriola_dumerili
ENSMAMG00000020735	-	70	77.273	ENSSLDG00000019167	-	100	78.788	Seriola_lalandi_dorsalis
ENSMAMG00000020735	-	98	74.194	ENSSPAG00000009182	-	100	73.925	Stegastes_partitus
ENSMAMG00000020735	-	98	63.859	ENSTRUG00000015277	IHABP	100	63.859	Takifugu_rubripes
ENSMAMG00000020735	-	96	34.804	ENSTTRG00000005786	-	50	41.014	Tursiops_truncatus