EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000020855 (Gene tree)
Gene ID: 113135876
Gene Symbol: bms1
Alias: bms1l|im:7152071|wu:fb37d08
Full Name: BMS1%2C ribosome biogenesis factor
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 13196 bases
Position: chrOOHQ01000019.1:3763170-3776365
Accession: 113135876
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000030963	AARP2CN	PF08142.12	5.9e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000031770	-	4008	XM_026316205	ENSMAMP00000030963	1203 (aa)	XP_026171990	UPI000E45B986

Gene Model

Click here to download ENSMAMG00000020855's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000020855's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000020855	bms1	90	70.776	ENSG00000165733	BMS1	99	59.503	Homo_sapiens
ENSMAMG00000020855	bms1	88	80.075	ENSAPOG00000002296	bms1	100	81.010	Acanthochromis_polyacanthus
ENSMAMG00000020855	bms1	88	74.453	ENSAMEG00000016834	BMS1	99	59.397	Ailuropoda_melanoleuca
ENSMAMG00000020855	bms1	100	75.060	ENSACIG00000002588	bms1	100	76.776	Amphilophus_citrinellus
ENSMAMG00000020855	bms1	100	80.685	ENSAOCG00000018088	bms1	100	81.270	Amphiprion_ocellaris
ENSMAMG00000020855	bms1	100	80.653	ENSAPEG00000014673	bms1	100	81.240	Amphiprion_percula
ENSMAMG00000020855	bms1	100	82.445	ENSATEG00000023465	bms1	100	83.265	Anabas_testudineus
ENSMAMG00000020855	bms1	99	63.001	ENSACAG00000004537	-	87	67.742	Anolis_carolinensis
ENSMAMG00000020855	bms1	88	70.843	ENSANAG00000023432	BMS1	99	59.457	Aotus_nancymaae
ENSMAMG00000020855	bms1	100	79.487	ENSACLG00000001294	bms1	100	80.791	Astatotilapia_calliptera
ENSMAMG00000020855	bms1	50	77.011	ENSAMXG00000011236	bms1	100	68.110	Astyanax_mexicanus
ENSMAMG00000020855	bms1	99	59.551	ENSBTAG00000012878	BMS1	99	60.217	Bos_taurus
ENSMAMG00000020855	bms1	84	53.333	WBGene00022021	Y61A9LA.10	96	51.016	Caenorhabditis_elegans
ENSMAMG00000020855	bms1	98	64.733	ENSCJAG00000021705	BMS1	99	64.272	Callithrix_jacchus
ENSMAMG00000020855	bms1	97	65.595	ENSCAFG00000007114	BMS1	99	59.474	Canis_familiaris
ENSMAMG00000020855	bms1	97	65.595	ENSCAFG00020025282	BMS1	99	59.474	Canis_lupus_dingo
ENSMAMG00000020855	bms1	99	59.985	ENSCHIG00000023251	BMS1	99	60.573	Capra_hircus
ENSMAMG00000020855	bms1	99	56.019	ENSCAPG00000008652	BMS1	99	56.163	Cavia_aperea
ENSMAMG00000020855	bms1	99	59.535	ENSCPOG00000000502	BMS1	99	59.752	Cavia_porcellus
ENSMAMG00000020855	bms1	54	55.692	ENSCCAG00000024969	-	99	49.417	Cebus_capucinus
ENSMAMG00000020855	bms1	98	64.787	ENSCATG00000030625	-	99	59.612	Cercocebus_atys
ENSMAMG00000020855	bms1	72	54.043	ENSCATG00000008695	-	76	55.180	Cercocebus_atys
ENSMAMG00000020855	bms1	95	66.667	ENSCLAG00000002446	BMS1	89	66.541	Chinchilla_lanigera
ENSMAMG00000020855	bms1	98	64.939	ENSCSAG00000011118	BMS1	89	65.835	Chlorocebus_sabaeus
ENSMAMG00000020855	bms1	91	67.937	ENSCHOG00000011055	BMS1	99	59.000	Choloepus_hoffmanni
ENSMAMG00000020855	bms1	98	65.297	ENSCPBG00000025581	BMS1	87	66.667	Chrysemys_picta_bellii
ENSMAMG00000020855	bms1	85	60.680	ENSCING00000003181	-	97	52.259	Ciona_intestinalis
ENSMAMG00000020855	bms1	70	54.353	ENSCSAVG00000004113	-	87	54.023	Ciona_savignyi
ENSMAMG00000020855	bms1	98	65.443	ENSCANG00000011609	BMS1	99	59.736	Colobus_angolensis_palliatus
ENSMAMG00000020855	bms1	91	72.494	ENSCGRG00001019461	Bms1	99	58.869	Cricetulus_griseus_chok1gshd
ENSMAMG00000020855	bms1	91	72.494	ENSCGRG00000009016	Bms1	99	58.869	Cricetulus_griseus_crigri
ENSMAMG00000020855	bms1	100	75.301	ENSCSEG00000002469	bms1	100	75.279	Cynoglossus_semilaevis
ENSMAMG00000020855	bms1	100	77.558	ENSCVAG00000008371	bms1	100	78.501	Cyprinodon_variegatus
ENSMAMG00000020855	bms1	99	69.760	ENSDARG00000054154	bms1	99	71.337	Danio_rerio
ENSMAMG00000020855	bms1	97	65.116	ENSDNOG00000015761	BMS1	99	59.202	Dasypus_novemcinctus
ENSMAMG00000020855	bms1	88	69.526	ENSDORG00000002982	Bms1	99	59.581	Dipodomys_ordii
ENSMAMG00000020855	bms1	84	59.080	FBgn0036686	CG7728	99	46.495	Drosophila_melanogaster
ENSMAMG00000020855	bms1	76	69.231	ENSETEG00000009554	BMS1	79	63.393	Echinops_telfairi
ENSMAMG00000020855	bms1	89	69.752	ENSEASG00005006894	BMS1	99	59.691	Equus_asinus_asinus
ENSMAMG00000020855	bms1	97	64.806	ENSECAG00000001358	BMS1	99	59.660	Equus_caballus
ENSMAMG00000020855	bms1	99	71.870	ENSELUG00000001756	bms1	99	72.033	Esox_lucius
ENSMAMG00000020855	bms1	89	74.328	ENSFCAG00000011220	BMS1	99	58.951	Felis_catus
ENSMAMG00000020855	bms1	95	67.633	ENSFALG00000006882	BMS1	99	58.892	Ficedula_albicollis
ENSMAMG00000020855	bms1	99	59.380	ENSFDAG00000001422	BMS1	99	59.380	Fukomys_damarensis
ENSMAMG00000020855	bms1	100	79.139	ENSFHEG00000003367	bms1	100	79.125	Fundulus_heteroclitus
ENSMAMG00000020855	bms1	99	70.746	ENSGMOG00000000718	bms1	99	70.297	Gadus_morhua
ENSMAMG00000020855	bms1	85	74.572	ENSGALG00000002624	BMS1	89	66.564	Gallus_gallus
ENSMAMG00000020855	bms1	99	82.853	ENSGACG00000015334	bms1	89	82.853	Gasterosteus_aculeatus
ENSMAMG00000020855	bms1	98	65.038	ENSGAGG00000003467	BMS1	99	64.407	Gopherus_agassizii
ENSMAMG00000020855	bms1	100	79.570	ENSHBUG00000022628	bms1	100	80.941	Haplochromis_burtoni
ENSMAMG00000020855	bms1	99	59.472	ENSHGLG00000000477	BMS1	99	59.363	Heterocephalus_glaber_female
ENSMAMG00000020855	bms1	99	59.472	ENSHGLG00100002176	BMS1	99	59.363	Heterocephalus_glaber_male
ENSMAMG00000020855	bms1	99	77.833	ENSHCOG00000017604	bms1	99	77.852	Hippocampus_comes
ENSMAMG00000020855	bms1	99	69.133	ENSIPUG00000017855	bms1	99	70.294	Ictalurus_punctatus
ENSMAMG00000020855	bms1	91	70.112	ENSSTOG00000015063	BMS1	88	66.292	Ictidomys_tridecemlineatus
ENSMAMG00000020855	bms1	90	69.752	ENSJJAG00000017328	Bms1	99	59.472	Jaculus_jaculus
ENSMAMG00000020855	bms1	65	72.901	ENSKMAG00000021982	bms1	97	73.325	Kryptolebias_marmoratus
ENSMAMG00000020855	bms1	100	76.993	ENSLBEG00000028208	bms1	100	77.340	Labrus_bergylta
ENSMAMG00000020855	bms1	89	73.839	ENSLACG00000001600	BMS1	99	56.831	Latimeria_chalumnae
ENSMAMG00000020855	bms1	54	73.293	ENSLOCG00000012914	bms1	99	69.887	Lepisosteus_oculatus
ENSMAMG00000020855	bms1	99	63.526	ENSLAFG00000006250	BMS1	91	65.440	Loxodonta_africana
ENSMAMG00000020855	bms1	88	63.569	ENSMFAG00000037771	BMS1	96	64.312	Macaca_fascicularis
ENSMAMG00000020855	bms1	80	59.134	ENSMMUG00000007426	-	85	60.155	Macaca_mulatta
ENSMAMG00000020855	bms1	69	57.243	ENSMLEG00000029084	-	75	54.499	Mandrillus_leucophaeus
ENSMAMG00000020855	bms1	100	79.487	ENSMZEG00005005663	bms1	100	80.791	Maylandia_zebra
ENSMAMG00000020855	bms1	91	68.116	ENSMGAG00000001170	BMS1	88	67.707	Meleagris_gallopavo
ENSMAMG00000020855	bms1	91	72.131	ENSMAUG00000002195	Bms1	99	59.282	Mesocricetus_auratus
ENSMAMG00000020855	bms1	98	64.894	ENSMICG00000009977	BMS1	99	59.248	Microcebus_murinus
ENSMAMG00000020855	bms1	98	63.528	ENSMOCG00000002038	Bms1	99	58.533	Microtus_ochrogaster
ENSMAMG00000020855	bms1	100	79.170	ENSMMOG00000000977	bms1	100	79.370	Mola_mola
ENSMAMG00000020855	bms1	97	67.040	ENSMODG00000001177	BMS1	99	59.785	Monodelphis_domestica
ENSMAMG00000020855	bms1	100	84.298	ENSMALG00000009680	bms1	100	84.628	Monopterus_albus
ENSMAMG00000020855	bms1	83	55.996	MGP_CAROLIEiJ_G0028785	-	62	78.205	Mus_caroli
ENSMAMG00000020855	bms1	90	70.046	ENSMUSG00000030138	Bms1	99	62.360	Mus_musculus
ENSMAMG00000020855	bms1	87	71.795	MGP_PahariEiJ_G0022539	Bms1	99	62.037	Mus_pahari
ENSMAMG00000020855	bms1	90	69.816	MGP_SPRETEiJ_G0029816	Bms1	99	61.985	Mus_spretus
ENSMAMG00000020855	bms1	98	65.046	ENSMPUG00000017276	BMS1	99	60.156	Mustela_putorius_furo
ENSMAMG00000020855	bms1	99	59.018	ENSMLUG00000003260	BMS1	99	59.154	Myotis_lucifugus
ENSMAMG00000020855	bms1	90	63.757	ENSNGAG00000015258	Bms1	99	56.245	Nannospalax_galili
ENSMAMG00000020855	bms1	88	74.083	ENSNLEG00000015791	BMS1	99	58.340	Nomascus_leucogenys
ENSMAMG00000020855	bms1	85	74.083	ENSOPRG00000005195	BMS1	80	73.839	Ochotona_princeps
ENSMAMG00000020855	bms1	89	70.203	ENSODEG00000005554	BMS1	99	59.133	Octodon_degus
ENSMAMG00000020855	bms1	100	80.595	ENSONIG00000007227	bms1	100	80.279	Oreochromis_niloticus
ENSMAMG00000020855	bms1	91	70.091	ENSOANG00000000662	-	88	65.835	Ornithorhynchus_anatinus
ENSMAMG00000020855	bms1	95	65.920	ENSOCUG00000005354	BMS1	99	59.317	Oryctolagus_cuniculus
ENSMAMG00000020855	bms1	99	77.925	ENSORLG00000014655	bms1	99	78.921	Oryzias_latipes
ENSMAMG00000020855	bms1	52	81.541	ENSORLG00020016246	bms1	99	75.687	Oryzias_latipes_hni
ENSMAMG00000020855	bms1	99	75.772	ENSORLG00015014183	bms1	99	76.206	Oryzias_latipes_hsok
ENSMAMG00000020855	bms1	99	78.117	ENSOMEG00000015042	bms1	99	78.207	Oryzias_melastigma
ENSMAMG00000020855	bms1	97	64.915	ENSOGAG00000006511	BMS1	99	58.963	Otolemur_garnettii
ENSMAMG00000020855	bms1	99	59.491	ENSOARG00000003900	BMS1	99	60.309	Ovis_aries
ENSMAMG00000020855	bms1	90	71.005	ENSPPAG00000027837	BMS1	99	56.899	Pan_paniscus
ENSMAMG00000020855	bms1	99	59.168	ENSPPRG00000001311	BMS1	99	58.873	Panthera_pardus
ENSMAMG00000020855	bms1	87	74.328	ENSPTIG00000009652	BMS1	99	58.888	Panthera_tigris_altaica
ENSMAMG00000020855	bms1	90	71.005	ENSPTRG00000002441	BMS1	99	59.612	Pan_troglodytes
ENSMAMG00000020855	bms1	97	76.997	ENSPKIG00000008165	bms1	90	74.771	Paramormyrops_kingsleyae
ENSMAMG00000020855	bms1	92	67.857	ENSPSIG00000006481	BMS1	89	66.197	Pelodiscus_sinensis
ENSMAMG00000020855	bms1	90	70.507	ENSPEMG00000022467	Bms1	99	54.461	Peromyscus_maniculatus_bairdii
ENSMAMG00000020855	bms1	88	71.461	ENSPCIG00000001339	BMS1	98	73.239	Phascolarctos_cinereus
ENSMAMG00000020855	bms1	97	81.541	ENSPFOG00000015180	bms1	99	76.438	Poecilia_formosa
ENSMAMG00000020855	bms1	99	76.949	ENSPMEG00000023176	bms1	94	77.861	Poecilia_mexicana
ENSMAMG00000020855	bms1	99	76.368	ENSPREG00000002695	bms1	99	76.631	Poecilia_reticulata
ENSMAMG00000020855	bms1	78	73.469	ENSPCAG00000014528	BMS1	76	63.483	Procavia_capensis
ENSMAMG00000020855	bms1	94	62.893	ENSPCOG00000023834	-	99	56.880	Propithecus_coquereli
ENSMAMG00000020855	bms1	99	59.176	ENSPVAG00000000725	BMS1	99	59.314	Pteropus_vampyrus
ENSMAMG00000020855	bms1	100	77.778	ENSPNYG00000018866	bms1	100	78.964	Pundamilia_nyererei
ENSMAMG00000020855	bms1	96	77.229	ENSPNAG00000000676	bms1	99	68.504	Pygocentrus_nattereri
ENSMAMG00000020855	bms1	79	64.733	ENSRNOG00000006576	Bms1	99	62.406	Rattus_norvegicus
ENSMAMG00000020855	bms1	90	67.352	ENSRROG00000040101	BMS1	99	61.248	Rhinopithecus_roxellana
ENSMAMG00000020855	bms1	79	43.849	YPL217C	-	73	53.409	Saccharomyces_cerevisiae
ENSMAMG00000020855	bms1	88	70.776	ENSSBOG00000035778	BMS1	99	59.891	Saimiri_boliviensis_boliviensis
ENSMAMG00000020855	bms1	99	62.707	ENSSHAG00000005062	BMS1	93	66.720	Sarcophilus_harrisii
ENSMAMG00000020855	bms1	53	76.899	ENSSFOG00015022313	bms1	99	70.616	Scleropages_formosus
ENSMAMG00000020855	bms1	100	80.177	ENSSMAG00000019966	bms1	100	80.983	Scophthalmus_maximus
ENSMAMG00000020855	bms1	100	83.022	ENSSDUG00000016875	bms1	100	83.916	Seriola_dumerili
ENSMAMG00000020855	bms1	100	82.538	ENSSLDG00000015199	bms1	100	83.428	Seriola_lalandi_dorsalis
ENSMAMG00000020855	bms1	52	71.000	ENSSARG00000014407	BMS1	99	48.948	Sorex_araneus
ENSMAMG00000020855	bms1	85	76.543	ENSSPUG00000014454	BMS1	87	68.006	Sphenodon_punctatus
ENSMAMG00000020855	bms1	90	70.429	ENSSSCG00000010198	BMS1	99	59.722	Sus_scrofa
ENSMAMG00000020855	bms1	95	68.116	ENSTGUG00000006302	-	87	68.328	Taeniopygia_guttata
ENSMAMG00000020855	bms1	99	71.393	ENSTRUG00000008028	bms1	99	70.899	Takifugu_rubripes
ENSMAMG00000020855	bms1	99	75.641	ENSTNIG00000006216	bms1	99	71.080	Tetraodon_nigroviridis
ENSMAMG00000020855	bms1	65	67.774	ENSTBEG00000001673	-	63	67.427	Tupaia_belangeri
ENSMAMG00000020855	bms1	99	59.548	ENSTTRG00000007983	BMS1	91	65.000	Tursiops_truncatus
ENSMAMG00000020855	bms1	88	74.817	ENSUAMG00000023996	BMS1	99	59.566	Ursus_americanus
ENSMAMG00000020855	bms1	88	74.817	ENSUMAG00000016523	BMS1	99	59.411	Ursus_maritimus
ENSMAMG00000020855	bms1	70	72.912	ENSVPAG00000007477	BMS1	83	71.097	Vicugna_pacos
ENSMAMG00000020855	bms1	97	65.595	ENSVVUG00000021305	BMS1	99	61.224	Vulpes_vulpes
ENSMAMG00000020855	bms1	98	59.760	ENSXETG00000008158	bms1	99	61.451	Xenopus_tropicalis
ENSMAMG00000020855	bms1	99	74.430	ENSXCOG00000000506	bms1	96	87.438	Xiphophorus_couchianus
ENSMAMG00000020855	bms1	99	76.246	ENSXMAG00000014236	bms1	99	77.492	Xiphophorus_maculatus