EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000021095 (Gene tree)
Gene ID: 113130814
Gene Symbol: si:dkey-13a21.4
Alias: zgc:110195
Full Name: ras-related protein rab7-like
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 1902 bases
Position: chrOOHQ01000082.1:21947664-21949565
Accession: 113130814
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000031330	MMR_HSR1	PF01926.23	1.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000032148	-	615	-	ENSMAMP00000031330	204 (aa)	XP_026163470	UPI000E459572

Gene Model

Click here to download ENSMAMG00000021095's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000021095's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000021095	si:dkey-13a21.4	93	35.602	ENSMAMG00000019230	si:dkey-16l2.16	85	35.602
ENSMAMG00000021095	si:dkey-13a21.4	58	32.773	ENSMAMG00000012997	RAP2B	94	33.846
ENSMAMG00000021095	si:dkey-13a21.4	74	38.462	ENSMAMG00000006640	-	63	38.462
ENSMAMG00000021095	si:dkey-13a21.4	99	51.208	ENSMAMG00000023962	RAB7A	99	51.208
ENSMAMG00000021095	si:dkey-13a21.4	80	34.731	ENSMAMG00000022707	dnajc27	61	34.731
ENSMAMG00000021095	si:dkey-13a21.4	84	37.572	ENSMAMG00000002795	rab15	79	37.572
ENSMAMG00000021095	si:dkey-13a21.4	92	34.392	ENSMAMG00000012233	rab6bb	89	34.392
ENSMAMG00000021095	si:dkey-13a21.4	77	35.000	ENSMAMG00000006378	rab11bb	71	35.000
ENSMAMG00000021095	si:dkey-13a21.4	83	34.503	ENSMAMG00000011549	rab2a	81	33.714
ENSMAMG00000021095	si:dkey-13a21.4	84	33.918	ENSMAMG00000008168	rabl2	73	33.918
ENSMAMG00000021095	si:dkey-13a21.4	77	34.375	ENSMAMG00000018556	rab11ba	72	34.177
ENSMAMG00000021095	si:dkey-13a21.4	75	39.744	ENSMAMG00000017431	zgc:101559	65	39.744
ENSMAMG00000021095	si:dkey-13a21.4	94	35.751	ENSMAMG00000006862	rab12	71	35.751
ENSMAMG00000021095	si:dkey-13a21.4	79	35.583	ENSMAMG00000018450	-	74	35.583
ENSMAMG00000021095	si:dkey-13a21.4	77	36.076	ENSMAMG00000017327	rab11a	72	36.076
ENSMAMG00000021095	si:dkey-13a21.4	79	37.423	ENSMAMG00000022322	rab5c	72	37.423
ENSMAMG00000021095	si:dkey-13a21.4	77	34.375	ENSMAMG00000018533	-	71	34.375
ENSMAMG00000021095	si:dkey-13a21.4	99	34.615	ENSMAMG00000009672	rab6ba	98	34.615
ENSMAMG00000021095	si:dkey-13a21.4	77	38.750	ENSMAMG00000021329	RAB39B	74	38.750
ENSMAMG00000021095	si:dkey-13a21.4	96	34.615	ENSMAMG00000000238	rab32b	91	34.615
ENSMAMG00000021095	si:dkey-13a21.4	79	38.272	ENSMAMG00000012488	rab6a	76	38.272
ENSMAMG00000021095	si:dkey-13a21.4	88	36.066	ENSMAMG00000018672	rab34a	69	36.066
ENSMAMG00000021095	si:dkey-13a21.4	79	36.810	ENSMAMG00000016207	-	72	36.810
ENSMAMG00000021095	si:dkey-13a21.4	96	46.465	ENSMAMG00000013538	rab9a	96	46.465
ENSMAMG00000021095	si:dkey-13a21.4	86	39.773	ENSMAMG00000011973	rab30	85	39.773
ENSMAMG00000021095	si:dkey-13a21.4	87	38.764	ENSMAMG00000020135	zgc:171927	80	38.764
ENSMAMG00000021095	si:dkey-13a21.4	89	35.912	ENSMAMG00000014320	rab18a	83	35.912
ENSMAMG00000021095	si:dkey-13a21.4	85	34.463	ENSMAMG00000010136	rab36	64	34.463
ENSMAMG00000021095	si:dkey-13a21.4	96	35.000	ENSMAMG00000020859	rab41	92	35.000
ENSMAMG00000021095	si:dkey-13a21.4	99	51.691	ENSMAMG00000020246	-	99	51.691
ENSMAMG00000021095	si:dkey-13a21.4	86	50.273	ENSMAMG00000009927	rab9b	88	50.273
ENSMAMG00000021095	si:dkey-13a21.4	81	36.145	ENSMAMG00000012471	rab25a	76	36.145
ENSMAMG00000021095	si:dkey-13a21.4	82	30.588	ENSMAMG00000013700	si:ch73-116o1.2	80	30.588
ENSMAMG00000021095	si:dkey-13a21.4	71	31.034	ENSMAMG00000004359	hrasb	80	32.692
ENSMAMG00000021095	si:dkey-13a21.4	73	39.073	ENSMAMG00000001098	rab33ba	61	39.073
ENSMAMG00000021095	si:dkey-13a21.4	85	33.143	ENSMAMG00000012750	rab14	80	33.143
ENSMAMG00000021095	si:dkey-13a21.4	77	35.625	ENSMAMG00000010278	rab11al	71	35.625
ENSMAMG00000021095	si:dkey-13a21.4	76	31.210	ENSMAMG00000001320	si:cabz01085950.1	64	31.210
ENSMAMG00000021095	si:dkey-13a21.4	91	34.946	ENSMAMG00000015456	rab23	77	35.583
ENSMAMG00000021095	si:dkey-13a21.4	89	34.946	ENSMAMG00000020214	rab34b	73	34.946
ENSMAMG00000021095	si:dkey-13a21.4	79	38.889	ENSMAMG00000018306	-	78	38.889
ENSMAMG00000021095	si:dkey-13a21.4	93	37.696	ENSMAMG00000014602	rab13	84	39.535
ENSMAMG00000021095	si:dkey-13a21.4	81	36.747	ENSMAMG00000010297	rab25b	76	36.747
ENSMAMG00000021095	si:dkey-13a21.4	96	36.275	ENSMAMG00000000565	rab33a	85	36.275
ENSMAMG00000021095	si:dkey-13a21.4	89	38.674	ENSMAMG00000018445	rab18b	83	38.674
ENSMAMG00000021095	si:dkey-13a21.4	77	36.478	ENSMAMG00000002296	rab42a	72	36.478
ENSMAMG00000021095	si:dkey-13a21.4	79	38.037	ENSMAMG00000012573	rab5aa	74	38.037
ENSMAMG00000021095	si:dkey-13a21.4	86	39.326	ENSMAMG00000020286	-	81	39.326
ENSMAMG00000021095	si:dkey-13a21.4	74	32.258	ENSMAMG00000014747	rasl11b	65	32.258
ENSMAMG00000021095	si:dkey-13a21.4	83	34.706	ENSMAMG00000006886	RAB15	78	34.706
ENSMAMG00000021095	si:dkey-13a21.4	79	39.634	ENSMAMG00000006963	RAB29	80	39.634
ENSMAMG00000021095	si:dkey-13a21.4	79	38.650	ENSMAMG00000006024	rab22a	82	38.650
ENSMAMG00000021095	si:dkey-13a21.4	77	37.107	ENSMAMG00000011131	-	73	37.107
ENSMAMG00000021095	si:dkey-13a21.4	79	37.654	ENSMAMG00000001408	rab1ba	80	37.654

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000021095	si:dkey-13a21.4	100	87.745	ENSACIG00000011024	si:dkey-13a21.4	100	87.745	Amphilophus_citrinellus
ENSMAMG00000021095	si:dkey-13a21.4	100	83.824	ENSAOCG00000020491	si:dkey-13a21.4	100	83.824	Amphiprion_ocellaris
ENSMAMG00000021095	si:dkey-13a21.4	100	83.824	ENSAPEG00000023338	si:dkey-13a21.4	92	83.824	Amphiprion_percula
ENSMAMG00000021095	si:dkey-13a21.4	100	86.275	ENSATEG00000014958	si:dkey-13a21.4	100	86.275	Anabas_testudineus
ENSMAMG00000021095	si:dkey-13a21.4	96	53.333	ENSACAG00000012345	-	97	53.333	Anolis_carolinensis
ENSMAMG00000021095	si:dkey-13a21.4	100	85.784	ENSACLG00000021109	si:dkey-13a21.4	99	85.784	Astatotilapia_calliptera
ENSMAMG00000021095	si:dkey-13a21.4	100	53.271	ENSAMXG00000032663	si:dkey-13a21.4	99	53.271	Astyanax_mexicanus
ENSMAMG00000021095	si:dkey-13a21.4	89	56.284	WBGene00004271	rab-7	100	51.196	Caenorhabditis_elegans
ENSMAMG00000021095	si:dkey-13a21.4	100	83.333	ENSCVAG00000001150	si:dkey-13a21.4	100	83.333	Cyprinodon_variegatus
ENSMAMG00000021095	si:dkey-13a21.4	96	64.615	ENSDARG00000026098	si:dkey-13a21.4	95	64.615	Danio_rerio
ENSMAMG00000021095	si:dkey-13a21.4	89	52.717	ENSDNOG00000043559	-	96	50.505	Dasypus_novemcinctus
ENSMAMG00000021095	si:dkey-13a21.4	100	81.951	ENSFHEG00000002502	si:dkey-13a21.4	100	81.951	Fundulus_heteroclitus
ENSMAMG00000021095	si:dkey-13a21.4	100	80.882	ENSGAFG00000020102	si:dkey-13a21.4	100	80.882	Gambusia_affinis
ENSMAMG00000021095	si:dkey-13a21.4	100	86.275	ENSHBUG00000014023	si:dkey-13a21.4	99	86.275	Haplochromis_burtoni
ENSMAMG00000021095	si:dkey-13a21.4	86	78.409	ENSKMAG00000021039	si:dkey-13a21.4	74	78.409	Kryptolebias_marmoratus
ENSMAMG00000021095	si:dkey-13a21.4	100	82.353	ENSLBEG00000018180	si:dkey-13a21.4	100	82.353	Labrus_bergylta
ENSMAMG00000021095	si:dkey-13a21.4	100	60.680	ENSLOCG00000014749	si:dkey-13a21.4	100	60.680	Lepisosteus_oculatus
ENSMAMG00000021095	si:dkey-13a21.4	87	53.672	ENSLAFG00000028984	-	86	53.672	Loxodonta_africana
ENSMAMG00000021095	si:dkey-13a21.4	100	86.275	ENSMZEG00005010220	si:dkey-13a21.4	99	86.275	Maylandia_zebra
ENSMAMG00000021095	si:dkey-13a21.4	99	85.714	ENSNBRG00000023214	si:dkey-13a21.4	99	85.714	Neolamprologus_brichardi
ENSMAMG00000021095	si:dkey-13a21.4	100	85.784	ENSONIG00000020296	si:dkey-13a21.4	100	85.784	Oreochromis_niloticus
ENSMAMG00000021095	si:dkey-13a21.4	100	78.922	ENSORLG00000025098	si:dkey-13a21.4	100	78.922	Oryzias_latipes
ENSMAMG00000021095	si:dkey-13a21.4	100	79.412	ENSORLG00020019465	si:dkey-13a21.4	100	79.412	Oryzias_latipes_hni
ENSMAMG00000021095	si:dkey-13a21.4	100	79.412	ENSORLG00015015121	si:dkey-13a21.4	100	79.412	Oryzias_latipes_hsok
ENSMAMG00000021095	si:dkey-13a21.4	96	63.959	ENSPKIG00000008691	si:dkey-13a21.4	96	63.959	Paramormyrops_kingsleyae
ENSMAMG00000021095	si:dkey-13a21.4	98	78.500	ENSPMGG00000023170	si:dkey-13a21.4	95	78.500	Periophthalmus_magnuspinnatus
ENSMAMG00000021095	si:dkey-13a21.4	100	81.373	ENSPFOG00000015409	si:dkey-13a21.4	100	81.373	Poecilia_formosa
ENSMAMG00000021095	si:dkey-13a21.4	100	81.373	ENSPLAG00000019688	si:dkey-13a21.4	100	81.373	Poecilia_latipinna
ENSMAMG00000021095	si:dkey-13a21.4	100	81.373	ENSPMEG00000019159	si:dkey-13a21.4	100	81.373	Poecilia_mexicana
ENSMAMG00000021095	si:dkey-13a21.4	100	80.392	ENSPREG00000022241	si:dkey-13a21.4	100	80.392	Poecilia_reticulata
ENSMAMG00000021095	si:dkey-13a21.4	100	85.784	ENSPNYG00000018613	si:dkey-13a21.4	99	85.784	Pundamilia_nyererei
ENSMAMG00000021095	si:dkey-13a21.4	100	45.714	YML001W	YPT7	100	45.714	Saccharomyces_cerevisiae
ENSMAMG00000021095	si:dkey-13a21.4	96	64.796	ENSSFOG00015009566	si:dkey-13a21.4	96	64.796	Scleropages_formosus
ENSMAMG00000021095	si:dkey-13a21.4	99	84.577	ENSSMAG00000013945	si:dkey-13a21.4	98	84.577	Scophthalmus_maximus
ENSMAMG00000021095	si:dkey-13a21.4	100	87.255	ENSSDUG00000019738	si:dkey-13a21.4	100	87.255	Seriola_dumerili
ENSMAMG00000021095	si:dkey-13a21.4	100	85.294	ENSSLDG00000011597	si:dkey-13a21.4	100	85.294	Seriola_lalandi_dorsalis
ENSMAMG00000021095	si:dkey-13a21.4	96	53.333	ENSXETG00000014257	mgc75872	97	53.333	Xenopus_tropicalis