EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000021148 (Gene tree)
Gene ID: 113135849
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 9676 bases
Position: chrOOHQ01000019.1:5317916-5327591
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000031402	RRM_1	PF00076.22	3.6e-17	1	1
ENSMAMP00000031404	RRM_1	PF00076.22	4.2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000032221	-	846	-	ENSMAMP00000031402	281 (aa)	-	-
ENSMAMT00000032223	-	2526	-	ENSMAMP00000031404	302 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000021148's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000021148's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000021148	-	81	69.828	ENSMAMG00000021609	-	82	79.310

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000021148	-	88	68.199	ENSG00000205937	RNPS1	92	68.582	Homo_sapiens
ENSMAMG00000021148	-	84	65.833	ENSAPOG00000017310	RNPS1	77	73.640	Acanthochromis_polyacanthus
ENSMAMG00000021148	-	90	95.985	ENSAPOG00000014649	-	99	95.985	Acanthochromis_polyacanthus
ENSMAMG00000021148	-	88	68.199	ENSAMEG00000017861	RNPS1	80	74.180	Ailuropoda_melanoleuca
ENSMAMG00000021148	-	75	93.868	ENSACIG00000020701	RNPS1	82	93.868	Amphilophus_citrinellus
ENSMAMG00000021148	-	74	66.667	ENSACIG00000014367	-	76	71.429	Amphilophus_citrinellus
ENSMAMG00000021148	-	81	74.138	ENSAOCG00000002404	RNPS1	82	74.569	Amphiprion_ocellaris
ENSMAMG00000021148	-	96	92.123	ENSAPEG00000019263	-	100	92.123	Amphiprion_percula
ENSMAMG00000021148	-	81	74.138	ENSAPEG00000006497	RNPS1	80	74.678	Amphiprion_percula
ENSMAMG00000021148	-	81	69.828	ENSATEG00000024267	RNPS1	82	79.310	Anabas_testudineus
ENSMAMG00000021148	-	74	70.270	ENSATEG00000000835	RNPS1	90	82.775	Anabas_testudineus
ENSMAMG00000021148	-	88	50.385	ENSAPLG00000006231	RNPS1	53	81.651	Anas_platyrhynchos
ENSMAMG00000021148	-	68	66.822	ENSACAG00000004088	RNPS1	93	63.203	Anolis_carolinensis
ENSMAMG00000021148	-	88	67.816	ENSANAG00000028802	RNPS1	85	74.167	Aotus_nancymaae
ENSMAMG00000021148	-	70	69.545	ENSANAG00000029802	-	84	69.545	Aotus_nancymaae
ENSMAMG00000021148	-	81	71.304	ENSACLG00000025942	RNPS1	82	77.391	Astatotilapia_calliptera
ENSMAMG00000021148	-	86	87.654	ENSACLG00000021537	-	89	90.171	Astatotilapia_calliptera
ENSMAMG00000021148	-	81	80.870	ENSAMXG00000006330	-	82	81.579	Astyanax_mexicanus
ENSMAMG00000021148	-	89	68.182	ENSBTAG00000009969	RNPS1	86	74.486	Bos_taurus
ENSMAMG00000021148	-	88	68.199	ENSCJAG00000014969	RNPS1	99	64.407	Callithrix_jacchus
ENSMAMG00000021148	-	88	68.199	ENSCAFG00000019397	RNPS1	80	74.180	Canis_familiaris
ENSMAMG00000021148	-	88	68.199	ENSCAFG00020026159	RNPS1	95	65.919	Canis_lupus_dingo
ENSMAMG00000021148	-	70	69.608	ENSCHIG00000014621	-	68	70.443	Capra_hircus
ENSMAMG00000021148	-	88	68.199	ENSTSYG00000001629	RNPS1	85	74.583	Carlito_syrichta
ENSMAMG00000021148	-	80	65.272	ENSTSYG00000031848	-	97	64.435	Carlito_syrichta
ENSMAMG00000021148	-	88	67.816	ENSCAPG00000007731	RNPS1	80	73.770	Cavia_aperea
ENSMAMG00000021148	-	88	67.816	ENSCPOG00000002066	RNPS1	85	74.167	Cavia_porcellus
ENSMAMG00000021148	-	83	71.667	ENSCCAG00000034480	RNPS1	85	74.167	Cebus_capucinus
ENSMAMG00000021148	-	91	62.082	ENSCATG00000042361	-	86	64.231	Cercocebus_atys
ENSMAMG00000021148	-	88	68.199	ENSCATG00000013756	RNPS1	97	64.017	Cercocebus_atys
ENSMAMG00000021148	-	88	68.199	ENSCLAG00000015546	RNPS1	85	74.583	Chinchilla_lanigera
ENSMAMG00000021148	-	90	73.050	ENSCSAG00000005219	-	80	71.250	Chlorocebus_sabaeus
ENSMAMG00000021148	-	88	67.816	ENSCHOG00000004866	RNPS1	80	73.770	Choloepus_hoffmanni
ENSMAMG00000021148	-	70	51.174	ENSCPBG00000000214	RNPS1	83	48.718	Chrysemys_picta_bellii
ENSMAMG00000021148	-	88	68.199	ENSCANG00000041307	RNPS1	85	74.583	Colobus_angolensis_palliatus
ENSMAMG00000021148	-	88	68.199	ENSCGRG00001020431	Rnps1	85	74.583	Cricetulus_griseus_chok1gshd
ENSMAMG00000021148	-	80	66.946	ENSCGRG00000014021	Rnps1	77	73.853	Cricetulus_griseus_crigri
ENSMAMG00000021148	-	81	87.281	ENSCSEG00000000402	RNPS1	77	90.909	Cynoglossus_semilaevis
ENSMAMG00000021148	-	81	74.569	ENSCSEG00000015997	RNPS1	81	75.107	Cynoglossus_semilaevis
ENSMAMG00000021148	-	78	73.543	ENSCVAG00000010868	RNPS1	76	79.167	Cyprinodon_variegatus
ENSMAMG00000021148	-	81	63.675	ENSDARG00000116743	rnps1	82	70.513	Danio_rerio
ENSMAMG00000021148	-	81	63.675	ENSDARG00000100188	RNPS1	82	70.513	Danio_rerio
ENSMAMG00000021148	-	88	68.199	ENSDNOG00000016081	RNPS1	80	74.180	Dasypus_novemcinctus
ENSMAMG00000021148	-	83	71.667	ENSDORG00000001755	Rnps1	85	74.167	Dipodomys_ordii
ENSMAMG00000021148	-	88	68.199	ENSEASG00005004862	RNPS1	80	74.180	Equus_asinus_asinus
ENSMAMG00000021148	-	78	63.948	ENSECAG00000023288	RNPS1	84	64.378	Equus_caballus
ENSMAMG00000021148	-	75	73.333	ENSELUG00000015003	RNPS1	77	74.408	Esox_lucius
ENSMAMG00000021148	-	88	68.582	ENSFCAG00000007690	RNPS1	85	75.000	Felis_catus
ENSMAMG00000021148	-	83	70.000	ENSFALG00000004868	RNPS1	85	72.199	Ficedula_albicollis
ENSMAMG00000021148	-	88	67.816	ENSFDAG00000003386	RNPS1	85	74.167	Fukomys_damarensis
ENSMAMG00000021148	-	76	69.124	ENSFHEG00000011705	RNPS1	77	77.419	Fundulus_heteroclitus
ENSMAMG00000021148	-	81	71.429	ENSGMOG00000001503	RNPS1	82	74.359	Gadus_morhua
ENSMAMG00000021148	-	83	70.000	ENSGALG00000009288	RNPS1	84	72.083	Gallus_gallus
ENSMAMG00000021148	-	76	72.222	ENSGAFG00000005457	RNPS1	75	77.465	Gambusia_affinis
ENSMAMG00000021148	-	81	69.957	ENSGACG00000011261	RNPS1	82	76.395	Gasterosteus_aculeatus
ENSMAMG00000021148	-	81	80.702	ENSGACG00000005641	-	82	84.956	Gasterosteus_aculeatus
ENSMAMG00000021148	-	88	66.284	ENSGAGG00000010452	RNPS1	79	71.311	Gopherus_agassizii
ENSMAMG00000021148	-	71	69.082	ENSGGOG00000026421	-	79	71.981	Gorilla_gorilla
ENSMAMG00000021148	-	88	68.199	ENSGGOG00000014275	RNPS1	95	65.929	Gorilla_gorilla
ENSMAMG00000021148	-	81	92.105	ENSHBUG00000017337	-	82	92.105	Haplochromis_burtoni
ENSMAMG00000021148	-	81	70.870	ENSHBUG00000002494	RNPS1	82	76.957	Haplochromis_burtoni
ENSMAMG00000021148	-	88	68.199	ENSHGLG00000013957	RNPS1	85	74.583	Heterocephalus_glaber_female
ENSMAMG00000021148	-	79	67.521	ENSHGLG00000006292	-	91	69.469	Heterocephalus_glaber_female
ENSMAMG00000021148	-	86	69.200	ENSHGLG00100015267	-	78	70.183	Heterocephalus_glaber_male
ENSMAMG00000021148	-	88	68.199	ENSHGLG00100003539	RNPS1	85	74.583	Heterocephalus_glaber_male
ENSMAMG00000021148	-	70	64.878	ENSHGLG00100011610	-	83	65.366	Heterocephalus_glaber_male
ENSMAMG00000021148	-	88	63.985	ENSHGLG00100001721	-	85	61.303	Heterocephalus_glaber_male
ENSMAMG00000021148	-	81	61.702	ENSIPUG00000011746	rnps1	91	71.610	Ictalurus_punctatus
ENSMAMG00000021148	-	83	69.915	ENSJJAG00000019234	-	68	70.339	Jaculus_jaculus
ENSMAMG00000021148	-	88	60.392	ENSJJAG00000010326	-	81	64.407	Jaculus_jaculus
ENSMAMG00000021148	-	88	68.199	ENSJJAG00000015576	-	85	74.583	Jaculus_jaculus
ENSMAMG00000021148	-	81	74.892	ENSKMAG00000009135	RNPS1	82	79.221	Kryptolebias_marmoratus
ENSMAMG00000021148	-	88	68.199	ENSMFAG00000042142	RNPS1	85	74.583	Macaca_fascicularis
ENSMAMG00000021148	-	88	63.462	ENSMFAG00000044121	-	90	61.923	Macaca_fascicularis
ENSMAMG00000021148	-	70	69.951	ENSMMUG00000019238	-	79	72.906	Macaca_mulatta
ENSMAMG00000021148	-	89	64.906	ENSMMUG00000041726	-	91	64.231	Macaca_mulatta
ENSMAMG00000021148	-	89	65.283	ENSMNEG00000024827	-	91	64.615	Macaca_nemestrina
ENSMAMG00000021148	-	71	64.251	ENSMLEG00000040232	-	80	66.184	Mandrillus_leucophaeus
ENSMAMG00000021148	-	88	68.199	ENSMLEG00000036928	RNPS1	85	74.583	Mandrillus_leucophaeus
ENSMAMG00000021148	-	81	92.105	ENSMZEG00005006256	-	83	92.105	Maylandia_zebra
ENSMAMG00000021148	-	81	71.304	ENSMZEG00005012742	RNPS1	82	77.391	Maylandia_zebra
ENSMAMG00000021148	-	79	64.979	ENSMGAG00000010042	RNPS1	98	64.979	Meleagris_gallopavo
ENSMAMG00000021148	-	88	67.816	ENSMICG00000031543	RNPS1	85	74.167	Microcebus_murinus
ENSMAMG00000021148	-	88	68.199	ENSMOCG00000003429	Rnps1	85	74.583	Microtus_ochrogaster
ENSMAMG00000021148	-	88	59.851	ENSMOCG00000000276	-	69	55.556	Microtus_ochrogaster
ENSMAMG00000021148	-	79	85.714	ENSMMOG00000004680	-	79	85.455	Mola_mola
ENSMAMG00000021148	-	75	76.190	ENSMMOG00000010863	RNPS1	77	75.587	Mola_mola
ENSMAMG00000021148	-	88	67.939	ENSMODG00000015891	RNPS1	85	70.229	Monodelphis_domestica
ENSMAMG00000021148	-	75	70.485	ENSMALG00000016619	RNPS1	73	75.109	Monopterus_albus
ENSMAMG00000021148	-	81	86.404	ENSMALG00000013384	-	86	82.533	Monopterus_albus
ENSMAMG00000021148	-	88	68.199	ENSMUSG00000034681	Rnps1	85	74.583	Mus_musculus
ENSMAMG00000021148	-	87	68.462	MGP_PahariEiJ_G0023498	Rnps1	85	74.583	Mus_pahari
ENSMAMG00000021148	-	88	68.199	MGP_SPRETEiJ_G0022092	Rnps1	85	74.583	Mus_spretus
ENSMAMG00000021148	-	88	68.199	ENSMLUG00000016808	RNPS1	80	74.180	Myotis_lucifugus
ENSMAMG00000021148	-	88	68.462	ENSNGAG00000023702	Rnps1	85	74.583	Nannospalax_galili
ENSMAMG00000021148	-	74	78.947	ENSNBRG00000023437	RNPS1	75	78.947	Neolamprologus_brichardi
ENSMAMG00000021148	-	81	92.105	ENSNBRG00000014540	-	84	92.105	Neolamprologus_brichardi
ENSMAMG00000021148	-	91	67.407	ENSNLEG00000009243	RNPS1	87	73.394	Nomascus_leucogenys
ENSMAMG00000021148	-	88	68.582	ENSMEUG00000008882	RNPS1	80	75.000	Notamacropus_eugenii
ENSMAMG00000021148	-	88	67.433	ENSOPRG00000016422	RNPS1	80	73.770	Ochotona_princeps
ENSMAMG00000021148	-	81	92.105	ENSONIG00000019627	-	83	92.105	Oreochromis_niloticus
ENSMAMG00000021148	-	88	62.782	ENSOCUG00000004387	-	85	58.846	Oryctolagus_cuniculus
ENSMAMG00000021148	-	81	68.421	ENSORLG00000008033	RNPS1	94	71.707	Oryzias_latipes
ENSMAMG00000021148	-	81	69.298	ENSORLG00020020207	RNPS1	82	75.983	Oryzias_latipes_hni
ENSMAMG00000021148	-	81	81.579	ENSORLG00015011183	RNPS1	73	86.900	Oryzias_latipes_hsok
ENSMAMG00000021148	-	81	68.860	ENSORLG00015000305	-	82	75.546	Oryzias_latipes_hsok
ENSMAMG00000021148	-	88	66.794	ENSOARG00000018056	-	68	74.180	Ovis_aries
ENSMAMG00000021148	-	90	65.299	ENSPPAG00000011845	RNPS1	86	70.417	Pan_paniscus
ENSMAMG00000021148	-	75	65.044	ENSPPAG00000037836	-	95	65.487	Pan_paniscus
ENSMAMG00000021148	-	88	68.582	ENSPPRG00000011255	RNPS1	85	75.000	Panthera_pardus
ENSMAMG00000021148	-	54	71.523	ENSPTIG00000015643	RNPS1	57	85.321	Panthera_tigris_altaica
ENSMAMG00000021148	-	88	67.816	ENSPTRG00000031310	RNPS1	85	74.167	Pan_troglodytes
ENSMAMG00000021148	-	71	69.082	ENSPTRG00000046326	-	80	71.981	Pan_troglodytes
ENSMAMG00000021148	-	88	68.199	ENSPANG00000015748	RNPS1	85	74.583	Papio_anubis
ENSMAMG00000021148	-	69	49.000	ENSPANG00000033576	-	74	50.500	Papio_anubis
ENSMAMG00000021148	-	81	69.492	ENSPKIG00000023465	RNPS1	82	68.644	Paramormyrops_kingsleyae
ENSMAMG00000021148	-	88	66.284	ENSPSIG00000006048	RNPS1	79	71.311	Pelodiscus_sinensis
ENSMAMG00000021148	-	88	68.199	ENSPEMG00000012797	Rnps1	85	74.583	Peromyscus_maniculatus_bairdii
ENSMAMG00000021148	-	88	68.582	ENSPCIG00000025012	RNPS1	85	75.417	Phascolarctos_cinereus
ENSMAMG00000021148	-	54	73.510	ENSPCIG00000016114	-	65	79.104	Phascolarctos_cinereus
ENSMAMG00000021148	-	76	73.148	ENSPFOG00000009978	RNPS1	75	78.404	Poecilia_formosa
ENSMAMG00000021148	-	76	73.148	ENSPLAG00000009343	RNPS1	75	78.404	Poecilia_latipinna
ENSMAMG00000021148	-	76	73.148	ENSPMEG00000008552	RNPS1	75	78.404	Poecilia_mexicana
ENSMAMG00000021148	-	76	73.148	ENSPREG00000001843	RNPS1	75	78.404	Poecilia_reticulata
ENSMAMG00000021148	-	88	66.667	ENSPCAG00000004514	RNPS1	80	72.131	Procavia_capensis
ENSMAMG00000021148	-	88	67.816	ENSPCOG00000005478	RNPS1	85	74.167	Propithecus_coquereli
ENSMAMG00000021148	-	88	68.199	ENSPVAG00000005105	RNPS1	80	74.180	Pteropus_vampyrus
ENSMAMG00000021148	-	81	71.304	ENSPNYG00000000585	RNPS1	82	77.391	Pundamilia_nyererei
ENSMAMG00000021148	-	64	71.667	ENSPNYG00000006233	-	80	70.984	Pundamilia_nyererei
ENSMAMG00000021148	-	81	79.565	ENSPNAG00000025479	RNPS1	82	83.333	Pygocentrus_nattereri
ENSMAMG00000021148	-	81	64.557	ENSPNAG00000017784	-	83	72.269	Pygocentrus_nattereri
ENSMAMG00000021148	-	84	66.667	ENSRNOG00000027239	AABR07037800.1	80	66.805	Rattus_norvegicus
ENSMAMG00000021148	-	88	67.816	ENSRNOG00000008703	Rnps1	80	73.770	Rattus_norvegicus
ENSMAMG00000021148	-	83	72.083	ENSRBIG00000038965	-	90	73.387	Rhinopithecus_bieti
ENSMAMG00000021148	-	88	68.199	ENSRROG00000041252	RNPS1	85	74.583	Rhinopithecus_roxellana
ENSMAMG00000021148	-	88	68.199	ENSSBOG00000027927	RNPS1	85	74.583	Saimiri_boliviensis_boliviensis
ENSMAMG00000021148	-	88	68.582	ENSSHAG00000016951	RNPS1	80	75.000	Sarcophilus_harrisii
ENSMAMG00000021148	-	81	69.787	ENSSFOG00015022746	RNPS1	85	71.489	Scleropages_formosus
ENSMAMG00000021148	-	81	78.879	ENSSFOG00015019341	-	82	71.863	Scleropages_formosus
ENSMAMG00000021148	-	81	75.109	ENSSMAG00000016933	RNPS1	82	75.109	Scophthalmus_maximus
ENSMAMG00000021148	-	92	96.403	ENSSDUG00000006433	-	93	96.403	Seriola_dumerili
ENSMAMG00000021148	-	81	68.534	ENSSDUG00000011453	RNPS1	82	77.586	Seriola_dumerili
ENSMAMG00000021148	-	79	68.750	ENSSLDG00000021341	RNPS1	81	77.232	Seriola_lalandi_dorsalis
ENSMAMG00000021148	-	76	68.545	ENSSLDG00000018362	-	75	79.654	Seriola_lalandi_dorsalis
ENSMAMG00000021148	-	88	65.900	ENSSPUG00000016588	RNPS1	79	71.311	Sphenodon_punctatus
ENSMAMG00000021148	-	85	96.512	ENSSPAG00000005411	-	100	96.512	Stegastes_partitus
ENSMAMG00000021148	-	88	67.816	ENSSSCG00000008048	RNPS1	80	73.770	Sus_scrofa
ENSMAMG00000021148	-	83	69.583	ENSTGUG00000003237	RNPS1	85	71.784	Taeniopygia_guttata
ENSMAMG00000021148	-	81	67.094	ENSTRUG00000008602	RNPS1	82	71.368	Takifugu_rubripes
ENSMAMG00000021148	-	81	68.376	ENSTNIG00000009753	RNPS1	81	73.504	Tetraodon_nigroviridis
ENSMAMG00000021148	-	81	76.623	ENSTNIG00000007411	-	83	79.574	Tetraodon_nigroviridis
ENSMAMG00000021148	-	91	69.259	ENSTBEG00000009098	RNPS1	96	68.582	Tupaia_belangeri
ENSMAMG00000021148	-	88	68.199	ENSTTRG00000008220	RNPS1	80	74.180	Tursiops_truncatus
ENSMAMG00000021148	-	88	68.199	ENSUAMG00000004462	RNPS1	95	68.582	Ursus_americanus
ENSMAMG00000021148	-	88	68.199	ENSUMAG00000022327	RNPS1	80	74.180	Ursus_maritimus
ENSMAMG00000021148	-	88	63.985	ENSVPAG00000009976	RNPS1	85	64.368	Vicugna_pacos
ENSMAMG00000021148	-	88	68.199	ENSVVUG00000009244	RNPS1	80	74.180	Vulpes_vulpes
ENSMAMG00000021148	-	79	68.996	ENSXETG00000024439	rnps1	71	74.429	Xenopus_tropicalis
ENSMAMG00000021148	-	81	74.026	ENSXMAG00000004827	RNPS1	82	78.355	Xiphophorus_maculatus