EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000021196 (Gene tree)
Gene ID: -
Gene Symbol: zgc:171929
Alias: -
Full Name: zgc:171929
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 3895 bases
Position: chrOOHQ01000002.1:504054-507948
Accession: ZDB-GENE-070820-19
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000031467	zf-C2H2	PF00096.26	2.3e-16	1	4
ENSMAMP00000031467	zf-C2H2	PF00096.26	2.3e-16	2	4
ENSMAMP00000031467	zf-C2H2	PF00096.26	2.3e-16	3	4
ENSMAMP00000031467	zf-C2H2	PF00096.26	2.3e-16	4	4
ENSMAMP00000031467	zf-met	PF12874.7	0.00018	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000032293	-	720	-	ENSMAMP00000031467	239 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000021196's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000021196's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000021196	zgc:171929	62	37.647	ENSMAMG00000007352	-	96	37.647
ENSMAMG00000021196	zgc:171929	54	39.024	ENSMAMG00000001808	zbtb47b	51	39.024
ENSMAMG00000021196	zgc:171929	92	36.559	ENSMAMG00000016484	-	97	36.893
ENSMAMG00000021196	zgc:171929	60	41.053	ENSMAMG00000014758	-	79	41.053
ENSMAMG00000021196	zgc:171929	52	37.500	ENSMAMG00000002083	-	93	37.079
ENSMAMG00000021196	zgc:171929	60	42.857	ENSMAMG00000017946	-	76	38.298
ENSMAMG00000021196	zgc:171929	69	39.560	ENSMAMG00000022502	-	86	39.560
ENSMAMG00000021196	zgc:171929	56	39.394	ENSMAMG00000016087	-	82	39.394
ENSMAMG00000021196	zgc:171929	59	35.833	ENSMAMG00000016542	-	59	35.833
ENSMAMG00000021196	zgc:171929	67	46.939	ENSMAMG00000006312	-	90	41.772
ENSMAMG00000021196	zgc:171929	51	34.694	ENSMAMG00000018743	-	65	33.673
ENSMAMG00000021196	zgc:171929	56	40.278	ENSMAMG00000018114	-	73	36.471
ENSMAMG00000021196	zgc:171929	56	39.450	ENSMAMG00000016519	-	67	39.450
ENSMAMG00000021196	zgc:171929	74	40.789	ENSMAMG00000022206	-	57	40.789
ENSMAMG00000021196	zgc:171929	53	37.079	ENSMAMG00000015434	-	78	37.079
ENSMAMG00000021196	zgc:171929	58	30.282	ENSMAMG00000010384	-	50	30.282
ENSMAMG00000021196	zgc:171929	60	43.210	ENSMAMG00000016119	-	84	43.210
ENSMAMG00000021196	zgc:171929	58	36.782	ENSMAMG00000010902	-	58	36.782
ENSMAMG00000021196	zgc:171929	60	44.156	ENSMAMG00000022154	-	51	44.156
ENSMAMG00000021196	zgc:171929	56	41.892	ENSMAMG00000019385	-	55	41.892
ENSMAMG00000021196	zgc:171929	56	40.000	ENSMAMG00000019301	-	71	36.752
ENSMAMG00000021196	zgc:171929	60	34.375	ENSMAMG00000002731	znf1056	62	34.375
ENSMAMG00000021196	zgc:171929	68	43.820	ENSMAMG00000009817	-	100	30.189

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000021196	zgc:171929	100	77.406	ENSAPOG00000006365	zgc:171929	98	77.406	Acanthochromis_polyacanthus
ENSMAMG00000021196	zgc:171929	100	80.498	ENSAOCG00000010460	zgc:171929	98	80.498	Amphiprion_ocellaris
ENSMAMG00000021196	zgc:171929	62	64.189	ENSAPLG00000016199	OVOL2	79	64.189	Anas_platyrhynchos
ENSMAMG00000021196	zgc:171929	88	45.064	ENSACAG00000014216	OVOL2	91	45.064	Anolis_carolinensis
ENSMAMG00000021196	zgc:171929	62	62.162	ENSTSYG00000012790	OVOL2	74	62.162	Carlito_syrichta
ENSMAMG00000021196	zgc:171929	59	65.714	ENSCAPG00000005775	OVOL2	83	65.714	Cavia_aperea
ENSMAMG00000021196	zgc:171929	89	49.083	ENSCPBG00000023454	OVOL2	90	49.083	Chrysemys_picta_bellii
ENSMAMG00000021196	zgc:171929	96	47.234	ENSCANG00000033179	OVOL2	97	47.234	Colobus_angolensis_palliatus
ENSMAMG00000021196	zgc:171929	100	64.964	ENSCVAG00000001397	zgc:171929	100	64.964	Cyprinodon_variegatus
ENSMAMG00000021196	zgc:171929	59	65.035	ENSDORG00000016697	Ovol2	59	65.035	Dipodomys_ordii
ENSMAMG00000021196	zgc:171929	89	44.094	ENSECAG00000007899	OVOL2	92	44.094	Equus_caballus
ENSMAMG00000021196	zgc:171929	100	55.102	ENSELUG00000020356	zgc:171929	99	55.442	Esox_lucius
ENSMAMG00000021196	zgc:171929	62	63.514	ENSFALG00000007594	OVOL2	52	63.514	Ficedula_albicollis
ENSMAMG00000021196	zgc:171929	59	65.035	ENSFDAG00000008730	OVOL2	85	65.035	Fukomys_damarensis
ENSMAMG00000021196	zgc:171929	62	64.865	ENSGALG00000008702	OVOL2	54	64.865	Gallus_gallus
ENSMAMG00000021196	zgc:171929	89	43.443	ENSGAGG00000020202	OVOL2	92	43.443	Gopherus_agassizii
ENSMAMG00000021196	zgc:171929	57	83.942	ENSHCOG00000007100	zgc:171929	76	83.942	Hippocampus_comes
ENSMAMG00000021196	zgc:171929	60	60.784	ENSSTOG00000024979	OVOL2	55	60.784	Ictidomys_tridecemlineatus
ENSMAMG00000021196	zgc:171929	55	69.466	ENSJJAG00000014942	Ovol2	56	62.338	Jaculus_jaculus
ENSMAMG00000021196	zgc:171929	100	66.187	ENSLBEG00000006082	zgc:171929	100	66.187	Labrus_bergylta
ENSMAMG00000021196	zgc:171929	88	45.000	ENSLACG00000011247	OVOL2	91	45.000	Latimeria_chalumnae
ENSMAMG00000021196	zgc:171929	62	64.189	ENSMGAG00000006770	OVOL2	85	64.189	Meleagris_gallopavo
ENSMAMG00000021196	zgc:171929	64	58.434	ENSMICG00000032455	OVOL2	58	59.627	Microcebus_murinus
ENSMAMG00000021196	zgc:171929	56	67.669	ENSMODG00000005504	OVOL2	50	67.669	Monodelphis_domestica
ENSMAMG00000021196	zgc:171929	60	61.688	MGP_CAROLIEiJ_G0024381	Ovol2	64	61.688	Mus_caroli
ENSMAMG00000021196	zgc:171929	60	61.688	ENSMUSG00000037279	Ovol2	64	61.688	Mus_musculus
ENSMAMG00000021196	zgc:171929	55	68.702	MGP_PahariEiJ_G0025825	Ovol2	54	68.702	Mus_pahari
ENSMAMG00000021196	zgc:171929	60	61.688	MGP_SPRETEiJ_G0025300	Ovol2	64	61.688	Mus_spretus
ENSMAMG00000021196	zgc:171929	55	69.466	ENSNGAG00000007174	Ovol2	54	69.466	Nannospalax_galili
ENSMAMG00000021196	zgc:171929	100	72.481	ENSONIG00000004778	zgc:171929	100	72.481	Oreochromis_niloticus
ENSMAMG00000021196	zgc:171929	56	67.669	ENSOANG00000001250	OVOL2	78	67.669	Ornithorhynchus_anatinus
ENSMAMG00000021196	zgc:171929	62	62.162	ENSOCUG00000012116	OVOL2	52	67.939	Oryctolagus_cuniculus
ENSMAMG00000021196	zgc:171929	100	68.284	ENSORLG00015015191	zgc:171929	100	68.284	Oryzias_latipes_hsok
ENSMAMG00000021196	zgc:171929	62	63.514	ENSOGAG00000030325	OVOL2	54	63.514	Otolemur_garnettii
ENSMAMG00000021196	zgc:171929	62	62.162	ENSPPAG00000032300	OVOL2	97	44.813	Pan_paniscus
ENSMAMG00000021196	zgc:171929	55	68.702	ENSPSIG00000006768	OVOL2	56	68.702	Pelodiscus_sinensis
ENSMAMG00000021196	zgc:171929	72	88.304	ENSPMEG00000005347	zgc:171929	85	88.304	Poecilia_mexicana
ENSMAMG00000021196	zgc:171929	66	60.625	ENSPCOG00000013518	OVOL2	56	61.935	Propithecus_coquereli
ENSMAMG00000021196	zgc:171929	55	67.939	ENSPVAG00000001140	OVOL2	55	67.939	Pteropus_vampyrus
ENSMAMG00000021196	zgc:171929	78	85.864	ENSSMAG00000003204	zgc:171929	81	85.864	Scophthalmus_maximus
ENSMAMG00000021196	zgc:171929	55	68.702	ENSSARG00000006563	OVOL2	78	68.702	Sorex_araneus
ENSMAMG00000021196	zgc:171929	59	64.138	ENSSPUG00000001720	OVOL2	74	64.138	Sphenodon_punctatus
ENSMAMG00000021196	zgc:171929	100	76.151	ENSSPAG00000001700	zgc:171929	98	77.824	Stegastes_partitus
ENSMAMG00000021196	zgc:171929	62	64.189	ENSTGUG00000005909	OVOL2	54	64.189	Taeniopygia_guttata
ENSMAMG00000021196	zgc:171929	89	43.028	ENSXETG00000020587	ovol1	94	43.028	Xenopus_tropicalis
ENSMAMG00000021196	zgc:171929	100	73.640	ENSXMAG00000022405	zgc:171929	100	73.640	Xiphophorus_maculatus