EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000021313 (Gene tree)
Gene ID: 113142894
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein 4-like
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 16409 bases
Position: chrOOHQ01000002.1:19686231-19702639
Accession: 113142894
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000031646	RRM_5	PF13893.6	5.5e-11	1	2
ENSMAMP00000031646	RRM_5	PF13893.6	5.5e-11	2	2
ENSMAMP00000031658	RRM_5	PF13893.6	6.4e-11	1	2
ENSMAMP00000031658	RRM_5	PF13893.6	6.4e-11	2	2
ENSMAMP00000031647	RRM_5	PF13893.6	7.2e-11	1	2
ENSMAMP00000031647	RRM_5	PF13893.6	7.2e-11	2	2
ENSMAMP00000031652	RRM_5	PF13893.6	7.2e-11	1	2
ENSMAMP00000031652	RRM_5	PF13893.6	7.2e-11	2	2
ENSMAMP00000031654	RRM_5	PF13893.6	7.2e-11	1	2
ENSMAMP00000031654	RRM_5	PF13893.6	7.2e-11	2	2
ENSMAMP00000031645	RRM_5	PF13893.6	4.6e-09	1	2
ENSMAMP00000031645	RRM_5	PF13893.6	4.6e-09	2	2
ENSMAMP00000031646	RRM_1	PF00076.22	3.9e-33	1	2
ENSMAMP00000031646	RRM_1	PF00076.22	3.9e-33	2	2
ENSMAMP00000031658	RRM_1	PF00076.22	4.5e-33	1	2
ENSMAMP00000031658	RRM_1	PF00076.22	4.5e-33	2	2
ENSMAMP00000031647	RRM_1	PF00076.22	5.1e-33	1	2
ENSMAMP00000031647	RRM_1	PF00076.22	5.1e-33	2	2
ENSMAMP00000031652	RRM_1	PF00076.22	5.1e-33	1	2
ENSMAMP00000031652	RRM_1	PF00076.22	5.1e-33	2	2
ENSMAMP00000031654	RRM_1	PF00076.22	5.1e-33	1	2
ENSMAMP00000031654	RRM_1	PF00076.22	5.1e-33	2	2
ENSMAMP00000031645	RRM_1	PF00076.22	1.2e-25	1	2
ENSMAMP00000031645	RRM_1	PF00076.22	1.2e-25	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000032489	-	2319	-	ENSMAMP00000031658	548 (aa)	XP_026184026	UPI000E45A0CC
ENSMAMT00000032477	-	1968	-	ENSMAMP00000031646	521 (aa)	XP_026184027	UPI000E4572AE
ENSMAMT00000032476	-	1632	-	ENSMAMP00000031645	543 (aa)	-	-
ENSMAMT00000032478	-	1952	-	ENSMAMP00000031647	581 (aa)	-	-
ENSMAMT00000032483	-	2608	-	ENSMAMP00000031652	581 (aa)	-	-
ENSMAMT00000032485	-	2047	-	ENSMAMP00000031654	581 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000021313's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000021313's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000021313	-	71	62.271	ENSMAMG00000014394	rbm14b	61	62.271

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000021313	-	99	88.989	ENSAPOG00000003380	-	99	89.170	Acanthochromis_polyacanthus
ENSMAMG00000021313	-	72	62.366	ENSAPOG00000021712	rbm14b	68	62.366	Acanthochromis_polyacanthus
ENSMAMG00000021313	-	72	62.366	ENSACIG00000000381	rbm14b	65	62.590	Amphilophus_citrinellus
ENSMAMG00000021313	-	99	86.933	ENSACIG00000021173	-	99	86.933	Amphilophus_citrinellus
ENSMAMG00000021313	-	72	62.724	ENSAOCG00000008941	rbm14b	82	55.303	Amphiprion_ocellaris
ENSMAMG00000021313	-	100	88.628	ENSAOCG00000001659	-	100	88.628	Amphiprion_ocellaris
ENSMAMG00000021313	-	72	62.724	ENSAPEG00000003161	rbm14b	82	55.725	Amphiprion_percula
ENSMAMG00000021313	-	99	89.474	ENSAPEG00000016988	-	99	89.474	Amphiprion_percula
ENSMAMG00000021313	-	100	89.101	ENSATEG00000009700	-	97	89.101	Anabas_testudineus
ENSMAMG00000021313	-	72	61.649	ENSATEG00000003034	rbm14b	78	56.892	Anabas_testudineus
ENSMAMG00000021313	-	72	62.366	ENSACLG00000014355	rbm14b	64	62.590	Astatotilapia_calliptera
ENSMAMG00000021313	-	100	88.468	ENSACLG00000009112	-	97	88.649	Astatotilapia_calliptera
ENSMAMG00000021313	-	69	61.818	ENSAMXG00000031225	rbm14b	67	61.818	Astyanax_mexicanus
ENSMAMG00000021313	-	74	61.055	ENSAMXG00000007233	rbm14a	82	61.055	Astyanax_mexicanus
ENSMAMG00000021313	-	69	53.606	ENSCSEG00000000357	rbm14b	80	52.511	Cynoglossus_semilaevis
ENSMAMG00000021313	-	100	82.852	ENSCSEG00000019690	-	100	83.394	Cynoglossus_semilaevis
ENSMAMG00000021313	-	100	83.154	ENSCVAG00000014858	-	100	83.513	Cyprinodon_variegatus
ENSMAMG00000021313	-	75	47.708	ENSCVAG00000013776	rbm14b	83	47.708	Cyprinodon_variegatus
ENSMAMG00000021313	-	70	61.232	ENSDARG00000103834	rbm14b	64	61.957	Danio_rerio
ENSMAMG00000021313	-	74	60.759	ENSDARG00000012723	rbm14a	80	60.660	Danio_rerio
ENSMAMG00000021313	-	88	57.371	ENSELUG00000023633	rbm14a	81	58.178	Esox_lucius
ENSMAMG00000021313	-	69	60.000	ENSELUG00000004690	rbm14b	78	61.348	Esox_lucius
ENSMAMG00000021313	-	100	80.337	ENSFHEG00000020913	-	100	81.648	Fundulus_heteroclitus
ENSMAMG00000021313	-	52	63.177	ENSFHEG00000021265	rbm14b	65	63.177	Fundulus_heteroclitus
ENSMAMG00000021313	-	73	78.182	ENSGMOG00000010840	-	78	78.182	Gadus_morhua
ENSMAMG00000021313	-	72	62.366	ENSGAFG00000001924	rbm14b	66	62.366	Gambusia_affinis
ENSMAMG00000021313	-	100	81.629	ENSGAFG00000004455	-	100	82.576	Gambusia_affinis
ENSMAMG00000021313	-	100	76.364	ENSGACG00000020440	-	95	85.867	Gasterosteus_aculeatus
ENSMAMG00000021313	-	100	88.468	ENSHBUG00000003665	-	97	88.649	Haplochromis_burtoni
ENSMAMG00000021313	-	72	62.366	ENSHBUG00000016754	rbm14b	64	62.590	Haplochromis_burtoni
ENSMAMG00000021313	-	100	75.556	ENSHCOG00000004071	-	100	75.139	Hippocampus_comes
ENSMAMG00000021313	-	80	53.630	ENSHCOG00000012571	rbm14b	99	67.296	Hippocampus_comes
ENSMAMG00000021313	-	74	56.490	ENSIPUG00000021256	rbm14a	83	56.386	Ictalurus_punctatus
ENSMAMG00000021313	-	68	61.039	ENSIPUG00000009089	rbm14b	70	61.458	Ictalurus_punctatus
ENSMAMG00000021313	-	52	62.007	ENSKMAG00000020444	rbm14b	65	62.007	Kryptolebias_marmoratus
ENSMAMG00000021313	-	99	82.917	ENSKMAG00000008514	-	99	82.917	Kryptolebias_marmoratus
ENSMAMG00000021313	-	100	84.783	ENSLBEG00000001217	-	100	84.601	Labrus_bergylta
ENSMAMG00000021313	-	72	62.816	ENSLBEG00000027934	rbm14b	60	62.816	Labrus_bergylta
ENSMAMG00000021313	-	100	88.468	ENSMZEG00005001201	-	100	88.649	Maylandia_zebra
ENSMAMG00000021313	-	72	62.366	ENSMZEG00005020834	rbm14b	65	62.590	Maylandia_zebra
ENSMAMG00000021313	-	100	85.036	ENSMMOG00000014501	-	99	85.401	Mola_mola
ENSMAMG00000021313	-	72	57.762	ENSMMOG00000012912	rbm14b	69	57.762	Mola_mola
ENSMAMG00000021313	-	69	56.693	ENSMALG00000015445	rbm14b	82	57.979	Monopterus_albus
ENSMAMG00000021313	-	72	62.366	ENSNBRG00000003378	rbm14b	65	62.590	Neolamprologus_brichardi
ENSMAMG00000021313	-	99	87.884	ENSNBRG00000004960	-	99	87.884	Neolamprologus_brichardi
ENSMAMG00000021313	-	100	77.858	ENSONIG00000008557	-	95	87.821	Oreochromis_niloticus
ENSMAMG00000021313	-	69	59.840	ENSONIG00000013035	rbm14b	82	58.000	Oreochromis_niloticus
ENSMAMG00000021313	-	72	62.007	ENSORLG00000008051	rbm14b	66	62.007	Oryzias_latipes
ENSMAMG00000021313	-	100	83.725	ENSORLG00000001900	-	100	83.460	Oryzias_latipes
ENSMAMG00000021313	-	100	83.725	ENSORLG00020019144	-	100	83.460	Oryzias_latipes_hni
ENSMAMG00000021313	-	72	62.007	ENSORLG00020005551	rbm14b	82	45.455	Oryzias_latipes_hni
ENSMAMG00000021313	-	72	61.649	ENSORLG00015022683	rbm14b	66	61.649	Oryzias_latipes_hsok
ENSMAMG00000021313	-	100	83.725	ENSORLG00015000082	-	100	83.725	Oryzias_latipes_hsok
ENSMAMG00000021313	-	80	84.179	ENSOMEG00000006508	-	96	90.667	Oryzias_melastigma
ENSMAMG00000021313	-	72	62.007	ENSOMEG00000000910	rbm14b	78	55.471	Oryzias_melastigma
ENSMAMG00000021313	-	73	49.781	ENSPKIG00000009078	rbm14b	85	49.565	Paramormyrops_kingsleyae
ENSMAMG00000021313	-	81	77.014	ENSPMGG00000018869	-	93	84.459	Periophthalmus_magnuspinnatus
ENSMAMG00000021313	-	72	62.366	ENSPMGG00000013064	rbm14b	83	62.366	Periophthalmus_magnuspinnatus
ENSMAMG00000021313	-	100	81.629	ENSPFOG00000004843	-	100	81.818	Poecilia_formosa
ENSMAMG00000021313	-	72	62.366	ENSPFOG00000003614	rbm14b	66	62.366	Poecilia_formosa
ENSMAMG00000021313	-	72	62.007	ENSPLAG00000001395	rbm14b	66	62.007	Poecilia_latipinna
ENSMAMG00000021313	-	100	81.629	ENSPLAG00000017359	-	100	81.818	Poecilia_latipinna
ENSMAMG00000021313	-	72	62.366	ENSPMEG00000012911	rbm14b	66	62.366	Poecilia_mexicana
ENSMAMG00000021313	-	100	82.342	ENSPMEG00000004894	-	100	82.523	Poecilia_mexicana
ENSMAMG00000021313	-	72	62.366	ENSPREG00000003013	rbm14b	66	62.366	Poecilia_reticulata
ENSMAMG00000021313	-	100	81.629	ENSPREG00000007274	-	100	81.818	Poecilia_reticulata
ENSMAMG00000021313	-	72	62.366	ENSPNYG00000023605	rbm14b	65	62.590	Pundamilia_nyererei
ENSMAMG00000021313	-	100	88.468	ENSPNYG00000015906	-	100	88.649	Pundamilia_nyererei
ENSMAMG00000021313	-	69	62.182	ENSPNAG00000001977	rbm14b	83	47.992	Pygocentrus_nattereri
ENSMAMG00000021313	-	74	59.179	ENSPNAG00000012473	rbm14a	85	60.000	Pygocentrus_nattereri
ENSMAMG00000021313	-	77	50.740	ENSSFOG00015023796	rbm14b	94	47.701	Scleropages_formosus
ENSMAMG00000021313	-	100	89.293	ENSSMAG00000002055	-	100	89.293	Scophthalmus_maximus
ENSMAMG00000021313	-	63	59.375	ENSSMAG00000004522	rbm14b	68	59.375	Scophthalmus_maximus
ENSMAMG00000021313	-	72	62.366	ENSSDUG00000007975	rbm14b	65	62.590	Seriola_dumerili
ENSMAMG00000021313	-	100	89.189	ENSSDUG00000020756	-	100	89.910	Seriola_dumerili
ENSMAMG00000021313	-	100	88.710	ENSSLDG00000006311	-	100	89.427	Seriola_lalandi_dorsalis
ENSMAMG00000021313	-	72	62.366	ENSSLDG00000006472	rbm14b	65	62.590	Seriola_lalandi_dorsalis
ENSMAMG00000021313	-	72	62.366	ENSSPAG00000004231	rbm14b	64	62.590	Stegastes_partitus
ENSMAMG00000021313	-	99	90.076	ENSSPAG00000010825	-	99	89.655	Stegastes_partitus
ENSMAMG00000021313	-	71	62.816	ENSTRUG00000005716	rbm14b	65	62.816	Takifugu_rubripes
ENSMAMG00000021313	-	100	79.048	ENSTRUG00000009504	-	93	79.048	Takifugu_rubripes
ENSMAMG00000021313	-	91	74.946	ENSTNIG00000000058	-	94	75.758	Tetraodon_nigroviridis
ENSMAMG00000021313	-	69	55.200	ENSTNIG00000006844	rbm14b	79	54.135	Tetraodon_nigroviridis
ENSMAMG00000021313	-	99	79.719	ENSXCOG00000006825	-	99	79.719	Xiphophorus_couchianus
ENSMAMG00000021313	-	100	82.703	ENSXMAG00000000338	-	100	82.883	Xiphophorus_maculatus
ENSMAMG00000021313	-	72	62.366	ENSXMAG00000008390	rbm14b	66	62.366	Xiphophorus_maculatus