EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000021720 (Gene tree)
Gene ID: 113131377
Gene Symbol: zbtb18
Alias: si:ch211-221n23.1|znf238
Full Name: zinc finger and BTB domain containing 18
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 7671 bases
Position: chrOOHQ01000028.1:17880229-17887899
Accession: 113131377
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000032294	zf-C2H2	PF00096.26	3.5e-12	1	3
ENSMAMP00000032294	zf-C2H2	PF00096.26	3.5e-12	2	3
ENSMAMP00000032294	zf-C2H2	PF00096.26	3.5e-12	3	3
ENSMAMP00000032294	zf-met	PF12874.7	2.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000033132	-	4951	XM_026308535	ENSMAMP00000032294	576 (aa)	XP_026164319	UPI000E455CDB

Gene Model

Click here to download ENSMAMG00000021720's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000021720's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000021720	zbtb18	51	34.513	ENSMAMG00000018656	ZBTB14	72	34.513
ENSMAMG00000021720	zbtb18	94	41.026	ENSMAMG00000002542	zbtb16a	56	41.026

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000021720	zbtb18	100	97.064	ENSAPOG00000005168	zbtb18	100	97.064	Acanthochromis_polyacanthus
ENSMAMG00000021720	zbtb18	99	86.491	ENSACIG00000008655	zbtb18	99	86.491	Amphilophus_citrinellus
ENSMAMG00000021720	zbtb18	100	97.064	ENSAOCG00000014105	zbtb18	100	97.064	Amphiprion_ocellaris
ENSMAMG00000021720	zbtb18	100	96.564	ENSAPEG00000003817	zbtb18	79	96.564	Amphiprion_percula
ENSMAMG00000021720	zbtb18	100	97.222	ENSATEG00000010192	zbtb18	100	97.222	Anabas_testudineus
ENSMAMG00000021720	zbtb18	99	96.848	ENSACLG00000022978	zbtb18	98	96.848	Astatotilapia_calliptera
ENSMAMG00000021720	zbtb18	99	73.469	ENSAMXG00000042119	zbtb18	99	72.109	Astyanax_mexicanus
ENSMAMG00000021720	zbtb18	100	92.535	ENSCSEG00000003083	zbtb18	100	92.535	Cynoglossus_semilaevis
ENSMAMG00000021720	zbtb18	100	94.271	ENSCVAG00000016785	zbtb18	100	94.271	Cyprinodon_variegatus
ENSMAMG00000021720	zbtb18	98	72.426	ENSDARG00000028228	zbtb18	100	73.822	Danio_rerio
ENSMAMG00000021720	zbtb18	100	75.517	ENSELUG00000013471	zbtb18	100	74.828	Esox_lucius
ENSMAMG00000021720	zbtb18	99	93.902	ENSFHEG00000020005	zbtb18	99	93.902	Fundulus_heteroclitus
ENSMAMG00000021720	zbtb18	57	91.971	ENSGMOG00000018718	zbtb18	60	90.256	Gadus_morhua
ENSMAMG00000021720	zbtb18	99	91.986	ENSGAFG00000000619	zbtb18	99	91.986	Gambusia_affinis
ENSMAMG00000021720	zbtb18	100	90.972	ENSGACG00000010518	zbtb18	97	90.972	Gasterosteus_aculeatus
ENSMAMG00000021720	zbtb18	100	96.875	ENSHBUG00000013654	zbtb18	100	96.875	Haplochromis_burtoni
ENSMAMG00000021720	zbtb18	61	82.632	ENSHCOG00000002345	zbtb18	94	82.632	Hippocampus_comes
ENSMAMG00000021720	zbtb18	99	65.292	ENSIPUG00000008912	zbtb18	99	65.799	Ictalurus_punctatus
ENSMAMG00000021720	zbtb18	100	95.139	ENSKMAG00000002780	zbtb18	100	95.139	Kryptolebias_marmoratus
ENSMAMG00000021720	zbtb18	100	95.139	ENSLBEG00000014796	zbtb18	100	95.139	Labrus_bergylta
ENSMAMG00000021720	zbtb18	84	61.400	ENSMFAG00000033326	ZBTB18	99	59.519	Macaca_fascicularis
ENSMAMG00000021720	zbtb18	84	61.523	ENSMMUG00000015664	ZBTB18	100	59.635	Macaca_mulatta
ENSMAMG00000021720	zbtb18	100	96.875	ENSMZEG00005027394	zbtb18	100	96.875	Maylandia_zebra
ENSMAMG00000021720	zbtb18	94	51.197	ENSMGAG00000015389	-	100	51.017	Meleagris_gallopavo
ENSMAMG00000021720	zbtb18	98	87.633	ENSMMOG00000007888	zbtb18	99	87.633	Mola_mola
ENSMAMG00000021720	zbtb18	100	96.354	ENSMALG00000000725	zbtb18	100	96.354	Monopterus_albus
ENSMAMG00000021720	zbtb18	98	96.991	ENSNBRG00000013796	zbtb18	100	96.991	Neolamprologus_brichardi
ENSMAMG00000021720	zbtb18	100	97.222	ENSONIG00000000862	zbtb18	100	97.222	Oreochromis_niloticus
ENSMAMG00000021720	zbtb18	99	94.066	ENSORLG00000027425	zbtb18	98	94.396	Oryzias_latipes
ENSMAMG00000021720	zbtb18	99	94.241	ENSORLG00020011988	zbtb18	98	94.571	Oryzias_latipes_hni
ENSMAMG00000021720	zbtb18	99	94.415	ENSORLG00015017457	zbtb18	98	94.396	Oryzias_latipes_hsok
ENSMAMG00000021720	zbtb18	99	94.746	ENSOMEG00000011249	zbtb18	98	94.746	Oryzias_melastigma
ENSMAMG00000021720	zbtb18	98	55.304	ENSPKIG00000008787	-	100	55.401	Paramormyrops_kingsleyae
ENSMAMG00000021720	zbtb18	99	70.761	ENSPKIG00000021964	zbtb18	96	70.940	Paramormyrops_kingsleyae
ENSMAMG00000021720	zbtb18	98	83.540	ENSPMGG00000008020	zbtb18	100	83.540	Periophthalmus_magnuspinnatus
ENSMAMG00000021720	zbtb18	98	91.696	ENSPFOG00000022080	zbtb18	100	91.696	Poecilia_formosa
ENSMAMG00000021720	zbtb18	98	86.572	ENSPLAG00000020960	zbtb18	100	86.572	Poecilia_latipinna
ENSMAMG00000021720	zbtb18	98	86.572	ENSPLAG00000011299	-	100	86.572	Poecilia_latipinna
ENSMAMG00000021720	zbtb18	98	92.580	ENSPMEG00000007554	zbtb18	100	92.580	Poecilia_mexicana
ENSMAMG00000021720	zbtb18	99	92.857	ENSPREG00000008576	zbtb18	99	92.857	Poecilia_reticulata
ENSMAMG00000021720	zbtb18	100	96.875	ENSPNYG00000001530	zbtb18	100	96.875	Pundamilia_nyererei
ENSMAMG00000021720	zbtb18	86	71.120	ENSPNAG00000014066	zbtb18	88	67.939	Pygocentrus_nattereri
ENSMAMG00000021720	zbtb18	98	94.690	ENSSMAG00000018041	zbtb18	100	94.159	Scophthalmus_maximus
ENSMAMG00000021720	zbtb18	98	97.699	ENSSDUG00000018660	zbtb18	100	97.699	Seriola_dumerili
ENSMAMG00000021720	zbtb18	98	97.699	ENSSLDG00000022573	zbtb18	100	97.699	Seriola_lalandi_dorsalis
ENSMAMG00000021720	zbtb18	94	50.457	ENSSPUG00000010554	-	100	51.188	Sphenodon_punctatus
ENSMAMG00000021720	zbtb18	100	97.396	ENSSPAG00000002691	zbtb18	100	97.396	Stegastes_partitus
ENSMAMG00000021720	zbtb18	98	93.805	ENSTRUG00000020604	zbtb18	100	93.805	Takifugu_rubripes
ENSMAMG00000021720	zbtb18	99	85.565	ENSTNIG00000000430	zbtb18	99	85.864	Tetraodon_nigroviridis
ENSMAMG00000021720	zbtb18	98	87.633	ENSXCOG00000013308	zbtb18	100	87.633	Xiphophorus_couchianus
ENSMAMG00000021720	zbtb18	99	83.888	ENSXMAG00000018241	zbtb18	99	83.888	Xiphophorus_maculatus