EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000021788 (Gene tree)
Gene ID: 113142517
Gene Symbol: larp1
Alias: wu:fb92d03|wu:fd15e07
Full Name: La ribonucleoprotein domain family member 1
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 36244 bases
Position: chrOOHQ01000002.1:22628614-22664857
Accession: 113142517
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000032402	La	PF05383.17	3.5e-21	1	1
ENSMAMP00000032406	La	PF05383.17	3.9e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000033247	-	3060	-	ENSMAMP00000032406	1019 (aa)	-	-
ENSMAMT00000033243	-	3267	-	ENSMAMP00000032402	1088 (aa)	XP_026183320	UPI000E4609BA

Gene Model

Click here to download ENSMAMG00000021788's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000021788's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000021788	larp1	95	51.789	ENSMAMG00000000081	larp1b	93	53.347

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000021788	larp1	87	67.716	ENSG00000155506	LARP1	90	81.212	Homo_sapiens
ENSMAMG00000021788	larp1	87	96.698	ENSAPOG00000020685	larp1	98	96.698	Acanthochromis_polyacanthus
ENSMAMG00000021788	larp1	85	70.273	ENSAMEG00000016673	LARP1	99	68.219	Ailuropoda_melanoleuca
ENSMAMG00000021788	larp1	100	82.901	ENSACIG00000012994	larp1	100	81.958	Amphilophus_citrinellus
ENSMAMG00000021788	larp1	80	90.154	ENSAOCG00000007792	larp1	100	92.883	Amphiprion_ocellaris
ENSMAMG00000021788	larp1	100	91.026	ENSAPEG00000022246	larp1	100	91.117	Amphiprion_percula
ENSMAMG00000021788	larp1	100	87.691	ENSATEG00000013523	larp1	100	89.668	Anabas_testudineus
ENSMAMG00000021788	larp1	79	75.924	ENSAPLG00000007559	LARP1	99	72.246	Anas_platyrhynchos
ENSMAMG00000021788	larp1	86	70.631	ENSACAG00000004071	LARP1	94	76.303	Anolis_carolinensis
ENSMAMG00000021788	larp1	87	67.136	ENSANAG00000029949	LARP1	99	65.055	Aotus_nancymaae
ENSMAMG00000021788	larp1	100	89.337	ENSACLG00000015256	larp1	99	91.870	Astatotilapia_calliptera
ENSMAMG00000021788	larp1	99	75.385	ENSAMXG00000000859	larp1	99	75.827	Astyanax_mexicanus
ENSMAMG00000021788	larp1	97	64.615	ENSBTAG00000008443	LARP1	99	64.216	Bos_taurus
ENSMAMG00000021788	larp1	99	63.316	ENSCJAG00000004454	LARP1	99	63.453	Callithrix_jacchus
ENSMAMG00000021788	larp1	87	68.012	ENSCAFG00000017639	LARP1	99	68.186	Canis_familiaris
ENSMAMG00000021788	larp1	82	71.685	ENSCAFG00020023860	LARP1	99	71.685	Canis_lupus_dingo
ENSMAMG00000021788	larp1	98	63.498	ENSCHIG00000014414	LARP1	99	62.590	Capra_hircus
ENSMAMG00000021788	larp1	87	68.122	ENSTSYG00000013732	LARP1	99	65.650	Carlito_syrichta
ENSMAMG00000021788	larp1	79	70.546	ENSCAPG00000013865	LARP1	85	70.428	Cavia_aperea
ENSMAMG00000021788	larp1	85	69.706	ENSCPOG00000003377	LARP1	99	68.325	Cavia_porcellus
ENSMAMG00000021788	larp1	99	63.228	ENSCCAG00000025201	LARP1	99	63.365	Cebus_capucinus
ENSMAMG00000021788	larp1	99	60.978	ENSCATG00000030675	LARP1	96	65.625	Cercocebus_atys
ENSMAMG00000021788	larp1	90	67.389	ENSCLAG00000012755	LARP1	99	66.734	Chinchilla_lanigera
ENSMAMG00000021788	larp1	82	69.275	ENSCSAG00000010800	LARP1	98	68.658	Chlorocebus_sabaeus
ENSMAMG00000021788	larp1	84	66.284	ENSCHOG00000012716	LARP1	91	67.201	Choloepus_hoffmanni
ENSMAMG00000021788	larp1	88	73.899	ENSCPBG00000002173	LARP1	91	73.207	Chrysemys_picta_bellii
ENSMAMG00000021788	larp1	90	65.918	ENSCANG00000037418	LARP1	96	65.918	Colobus_angolensis_palliatus
ENSMAMG00000021788	larp1	99	64.213	ENSCGRG00001016913	Larp1	99	64.107	Cricetulus_griseus_chok1gshd
ENSMAMG00000021788	larp1	85	65.714	ENSCGRG00000009916	Larp1	99	65.714	Cricetulus_griseus_crigri
ENSMAMG00000021788	larp1	100	87.602	ENSCSEG00000016431	larp1	100	88.054	Cynoglossus_semilaevis
ENSMAMG00000021788	larp1	100	84.192	ENSCVAG00000022687	larp1	100	85.547	Cyprinodon_variegatus
ENSMAMG00000021788	larp1	99	68.533	ENSDARG00000101722	larp1	96	72.813	Danio_rerio
ENSMAMG00000021788	larp1	99	63.588	ENSDNOG00000012073	LARP1	99	63.412	Dasypus_novemcinctus
ENSMAMG00000021788	larp1	87	66.046	ENSDORG00000002897	Larp1	98	65.346	Dipodomys_ordii
ENSMAMG00000021788	larp1	82	69.836	ENSETEG00000020251	LARP1	100	69.508	Echinops_telfairi
ENSMAMG00000021788	larp1	99	63.301	ENSEASG00005001070	LARP1	99	63.828	Equus_asinus_asinus
ENSMAMG00000021788	larp1	99	63.795	ENSECAG00000017002	LARP1	79	64.345	Equus_caballus
ENSMAMG00000021788	larp1	85	66.302	ENSEEUG00000001065	LARP1	99	65.389	Erinaceus_europaeus
ENSMAMG00000021788	larp1	99	78.488	ENSELUG00000019403	larp1	99	78.559	Esox_lucius
ENSMAMG00000021788	larp1	99	63.509	ENSFCAG00000000592	LARP1	99	63.947	Felis_catus
ENSMAMG00000021788	larp1	78	76.348	ENSFALG00000008335	LARP1	99	76.838	Ficedula_albicollis
ENSMAMG00000021788	larp1	87	68.394	ENSFDAG00000021125	LARP1	99	68.394	Fukomys_damarensis
ENSMAMG00000021788	larp1	64	76.096	ENSFHEG00000020307	larp1	97	76.338	Fundulus_heteroclitus
ENSMAMG00000021788	larp1	99	67.769	ENSGALG00000040109	LARP1	97	73.048	Gallus_gallus
ENSMAMG00000021788	larp1	97	69.415	ENSGAGG00000025113	LARP1	95	77.427	Gopherus_agassizii
ENSMAMG00000021788	larp1	88	66.967	ENSGGOG00000006048	LARP1	94	67.067	Gorilla_gorilla
ENSMAMG00000021788	larp1	100	89.829	ENSHBUG00000020762	larp1	99	92.339	Haplochromis_burtoni
ENSMAMG00000021788	larp1	99	63.282	ENSHGLG00000006267	LARP1	99	63.158	Heterocephalus_glaber_female
ENSMAMG00000021788	larp1	91	56.522	ENSHGLG00100003395	-	93	55.634	Heterocephalus_glaber_male
ENSMAMG00000021788	larp1	87	67.947	ENSHGLG00100014230	-	99	67.745	Heterocephalus_glaber_male
ENSMAMG00000021788	larp1	88	94.629	ENSHCOG00000010786	larp1	99	91.687	Hippocampus_comes
ENSMAMG00000021788	larp1	97	71.010	ENSIPUG00000019105	Larp1	98	72.049	Ictalurus_punctatus
ENSMAMG00000021788	larp1	84	68.687	ENSSTOG00000005678	LARP1	99	65.789	Ictidomys_tridecemlineatus
ENSMAMG00000021788	larp1	99	60.936	ENSJJAG00000016950	Larp1	99	60.788	Jaculus_jaculus
ENSMAMG00000021788	larp1	100	86.685	ENSKMAG00000018468	larp1	99	89.857	Kryptolebias_marmoratus
ENSMAMG00000021788	larp1	98	85.283	ENSLBEG00000027172	larp1	100	85.072	Labrus_bergylta
ENSMAMG00000021788	larp1	94	76.316	ENSLOCG00000012457	larp1	99	75.831	Lepisosteus_oculatus
ENSMAMG00000021788	larp1	99	64.018	ENSLAFG00000008991	LARP1	99	63.378	Loxodonta_africana
ENSMAMG00000021788	larp1	87	67.240	ENSMFAG00000031651	LARP1	96	65.527	Macaca_fascicularis
ENSMAMG00000021788	larp1	84	67.789	ENSMMUG00000009411	LARP1	99	65.010	Macaca_mulatta
ENSMAMG00000021788	larp1	84	69.978	ENSMNEG00000039294	LARP1	99	70.946	Macaca_nemestrina
ENSMAMG00000021788	larp1	87	67.442	ENSMLEG00000035142	LARP1	96	65.723	Mandrillus_leucophaeus
ENSMAMG00000021788	larp1	100	89.337	ENSMZEG00005009345	larp1	99	91.870	Maylandia_zebra
ENSMAMG00000021788	larp1	85	73.767	ENSMGAG00000005696	LARP1	99	70.522	Meleagris_gallopavo
ENSMAMG00000021788	larp1	99	64.358	ENSMAUG00000001385	Larp1	99	64.107	Mesocricetus_auratus
ENSMAMG00000021788	larp1	89	66.269	ENSMICG00000000837	LARP1	99	71.541	Microcebus_murinus
ENSMAMG00000021788	larp1	98	64.311	ENSMOCG00000008920	Larp1	99	64.043	Microtus_ochrogaster
ENSMAMG00000021788	larp1	97	64.862	ENSMMOG00000013364	larp1	100	66.422	Mola_mola
ENSMAMG00000021788	larp1	84	71.795	ENSMODG00000008663	LARP1	98	68.884	Monodelphis_domestica
ENSMAMG00000021788	larp1	100	89.646	ENSMALG00000017180	larp1	100	89.646	Monopterus_albus
ENSMAMG00000021788	larp1	99	64.107	MGP_CAROLIEiJ_G0016383	Larp1	99	64.057	Mus_caroli
ENSMAMG00000021788	larp1	99	64.196	ENSMUSG00000037331	Larp1	99	64.146	Mus_musculus
ENSMAMG00000021788	larp1	99	64.050	MGP_PahariEiJ_G0017518	Larp1	99	63.911	Mus_pahari
ENSMAMG00000021788	larp1	99	64.196	MGP_SPRETEiJ_G0017225	Larp1	99	64.146	Mus_spretus
ENSMAMG00000021788	larp1	82	61.522	ENSMPUG00000013564	LARP1	99	61.628	Mustela_putorius_furo
ENSMAMG00000021788	larp1	87	64.813	ENSMLUG00000002608	LARP1	99	64.914	Myotis_lucifugus
ENSMAMG00000021788	larp1	87	66.219	ENSNGAG00000001098	Larp1	99	65.253	Nannospalax_galili
ENSMAMG00000021788	larp1	91	87.087	ENSNBRG00000008963	larp1	98	87.287	Neolamprologus_brichardi
ENSMAMG00000021788	larp1	87	66.565	ENSNLEG00000016588	LARP1	99	65.635	Nomascus_leucogenys
ENSMAMG00000021788	larp1	84	69.841	ENSMEUG00000002957	LARP1	94	69.841	Notamacropus_eugenii
ENSMAMG00000021788	larp1	87	67.745	ENSOPRG00000013014	LARP1	99	67.644	Ochotona_princeps
ENSMAMG00000021788	larp1	89	67.365	ENSODEG00000010824	LARP1	99	68.122	Octodon_degus
ENSMAMG00000021788	larp1	99	84.802	ENSONIG00000017308	larp1	99	85.265	Oreochromis_niloticus
ENSMAMG00000021788	larp1	89	69.292	ENSOANG00000005096	LARP1	98	70.170	Ornithorhynchus_anatinus
ENSMAMG00000021788	larp1	99	63.968	ENSOCUG00000013066	LARP1	99	63.879	Oryctolagus_cuniculus
ENSMAMG00000021788	larp1	100	85.009	ENSORLG00000000824	larp1	100	86.128	Oryzias_latipes
ENSMAMG00000021788	larp1	100	85.270	ENSORLG00020022241	larp1	100	84.995	Oryzias_latipes_hni
ENSMAMG00000021788	larp1	100	83.715	ENSORLG00015007538	larp1	100	84.995	Oryzias_latipes_hsok
ENSMAMG00000021788	larp1	100	83.989	ENSOMEG00000003134	larp1	100	85.178	Oryzias_melastigma
ENSMAMG00000021788	larp1	87	68.325	ENSOGAG00000016750	LARP1	99	68.122	Otolemur_garnettii
ENSMAMG00000021788	larp1	87	66.872	ENSOARG00000009893	LARP1	99	66.769	Ovis_aries
ENSMAMG00000021788	larp1	87	67.442	ENSPPAG00000042993	LARP1	93	67.543	Pan_paniscus
ENSMAMG00000021788	larp1	87	66.734	ENSPPRG00000009780	LARP1	94	66.227	Panthera_pardus
ENSMAMG00000021788	larp1	87	66.937	ENSPTIG00000007013	LARP1	94	66.734	Panthera_tigris_altaica
ENSMAMG00000021788	larp1	99	60.978	ENSPTRG00000017447	LARP1	93	67.543	Pan_troglodytes
ENSMAMG00000021788	larp1	99	60.978	ENSPANG00000008080	LARP1	96	65.723	Papio_anubis
ENSMAMG00000021788	larp1	98	66.850	ENSPKIG00000017153	-	99	68.511	Paramormyrops_kingsleyae
ENSMAMG00000021788	larp1	98	76.471	ENSPKIG00000010096	larp1	99	77.260	Paramormyrops_kingsleyae
ENSMAMG00000021788	larp1	96	77.077	ENSPMGG00000011599	larp1	99	77.650	Periophthalmus_magnuspinnatus
ENSMAMG00000021788	larp1	87	65.979	ENSPEMG00000022523	Larp1	99	65.283	Peromyscus_maniculatus_bairdii
ENSMAMG00000021788	larp1	97	65.746	ENSPCIG00000019242	LARP1	89	66.331	Phascolarctos_cinereus
ENSMAMG00000021788	larp1	100	82.671	ENSPFOG00000005836	larp1	100	82.491	Poecilia_formosa
ENSMAMG00000021788	larp1	100	82.310	ENSPLAG00000008936	larp1	100	82.310	Poecilia_latipinna
ENSMAMG00000021788	larp1	100	82.310	ENSPMEG00000013656	larp1	100	82.130	Poecilia_mexicana
ENSMAMG00000021788	larp1	88	85.348	ENSPREG00000005726	larp1	99	85.348	Poecilia_reticulata
ENSMAMG00000021788	larp1	85	67.086	ENSPCAG00000006407	LARP1	97	66.876	Procavia_capensis
ENSMAMG00000021788	larp1	87	61.218	ENSPCOG00000016949	LARP1	99	63.756	Propithecus_coquereli
ENSMAMG00000021788	larp1	97	64.151	ENSPVAG00000002262	LARP1	99	63.222	Pteropus_vampyrus
ENSMAMG00000021788	larp1	100	89.247	ENSPNYG00000007938	larp1	99	91.870	Pundamilia_nyererei
ENSMAMG00000021788	larp1	98	75.256	ENSPNAG00000021427	larp1	99	76.723	Pygocentrus_nattereri
ENSMAMG00000021788	larp1	87	66.116	ENSRNOG00000031544	Larp1	99	65.416	Rattus_norvegicus
ENSMAMG00000021788	larp1	90	65.723	ENSRBIG00000038005	LARP1	96	65.820	Rhinopithecus_bieti
ENSMAMG00000021788	larp1	90	65.723	ENSRROG00000034073	LARP1	99	71.171	Rhinopithecus_roxellana
ENSMAMG00000021788	larp1	90	66.082	ENSSBOG00000019816	LARP1	99	65.182	Saimiri_boliviensis_boliviensis
ENSMAMG00000021788	larp1	84	73.034	ENSSHAG00000011115	LARP1	99	70.031	Sarcophilus_harrisii
ENSMAMG00000021788	larp1	99	73.266	ENSSFOG00015018058	-	99	73.785	Scleropages_formosus
ENSMAMG00000021788	larp1	88	78.248	ENSSFOG00015020304	larp1	95	79.145	Scleropages_formosus
ENSMAMG00000021788	larp1	94	84.459	ENSSMAG00000007468	larp1	98	85.907	Scophthalmus_maximus
ENSMAMG00000021788	larp1	100	90.917	ENSSDUG00000000268	larp1	100	91.097	Seriola_dumerili
ENSMAMG00000021788	larp1	84	86.203	ENSSLDG00000016505	larp1	99	85.731	Seriola_lalandi_dorsalis
ENSMAMG00000021788	larp1	55	83.936	ENSSARG00000013907	-	87	78.909	Sorex_araneus
ENSMAMG00000021788	larp1	98	66.390	ENSSPUG00000012179	-	99	66.574	Sphenodon_punctatus
ENSMAMG00000021788	larp1	100	91.179	ENSSPAG00000003910	larp1	100	91.269	Stegastes_partitus
ENSMAMG00000021788	larp1	99	63.246	ENSSSCG00000017069	LARP1	99	70.601	Sus_scrofa
ENSMAMG00000021788	larp1	85	71.414	ENSTGUG00000000704	LARP1	100	71.624	Taeniopygia_guttata
ENSMAMG00000021788	larp1	99	85.149	ENSTRUG00000009470	larp1	99	84.698	Takifugu_rubripes
ENSMAMG00000021788	larp1	82	67.931	ENSTBEG00000003381	LARP1	99	67.931	Tupaia_belangeri
ENSMAMG00000021788	larp1	83	70.510	ENSTTRG00000015934	LARP1	99	68.029	Tursiops_truncatus
ENSMAMG00000021788	larp1	99	63.509	ENSUAMG00000019334	LARP1	99	63.860	Ursus_americanus
ENSMAMG00000021788	larp1	87	65.923	ENSUMAG00000002934	LARP1	99	66.024	Ursus_maritimus
ENSMAMG00000021788	larp1	82	71.685	ENSVVUG00000004644	LARP1	99	71.685	Vulpes_vulpes
ENSMAMG00000021788	larp1	90	71.146	ENSXETG00000008413	larp1	94	71.146	Xenopus_tropicalis
ENSMAMG00000021788	larp1	85	83.962	ENSXCOG00000004022	larp1	99	81.866	Xiphophorus_couchianus
ENSMAMG00000021788	larp1	100	82.204	ENSXMAG00000018780	larp1	100	82.023	Xiphophorus_maculatus