EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000021835 (Gene tree)
Gene ID: -
Gene Symbol: lrpprc
Alias: fc13c04|im:7150924|im:7151572|wu:fc13c04|wu:fj38h02
Full Name: leucine-rich pentatricopeptide repeat containing
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 42657 bases
Position: chrOOHQ01000028.1:18190896-18233552
Accession: ZDB-GENE-030131-7887
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000032483	PPR	PF01535.20	2.8e-32	1	5
ENSMAMP00000032483	PPR	PF01535.20	2.8e-32	2	5
ENSMAMP00000032483	PPR	PF01535.20	2.8e-32	3	5
ENSMAMP00000032483	PPR	PF01535.20	2.8e-32	4	5
ENSMAMP00000032483	PPR	PF01535.20	2.8e-32	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000033330	-	3918	-	ENSMAMP00000032483	1305 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000021835's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000021835's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000021835	lrpprc	98	65.347	ENSAPOG00000016610	lrpprc	98	65.053	Acanthochromis_polyacanthus
ENSMAMG00000021835	lrpprc	97	48.731	ENSAMEG00000005852	LRPPRC	99	48.611	Ailuropoda_melanoleuca
ENSMAMG00000021835	lrpprc	98	68.363	ENSACIG00000009604	lrpprc	97	68.178	Amphilophus_citrinellus
ENSMAMG00000021835	lrpprc	91	76.953	ENSAOCG00000005886	lrpprc	92	76.953	Amphiprion_ocellaris
ENSMAMG00000021835	lrpprc	92	77.419	ENSAPEG00000002937	lrpprc	96	77.419	Amphiprion_percula
ENSMAMG00000021835	lrpprc	91	72.901	ENSATEG00000010555	lrpprc	95	76.652	Anabas_testudineus
ENSMAMG00000021835	lrpprc	94	51.855	ENSACAG00000029278	LRPPRC	98	50.467	Anolis_carolinensis
ENSMAMG00000021835	lrpprc	98	48.647	ENSANAG00000027440	LRPPRC	93	58.600	Aotus_nancymaae
ENSMAMG00000021835	lrpprc	95	70.543	ENSACLG00000023712	lrpprc	92	77.922	Astatotilapia_calliptera
ENSMAMG00000021835	lrpprc	98	48.229	ENSCJAG00000000794	LRPPRC	93	57.760	Callithrix_jacchus
ENSMAMG00000021835	lrpprc	88	59.417	ENSCHIG00000020173	LRPPRC	98	47.977	Capra_hircus
ENSMAMG00000021835	lrpprc	95	42.702	ENSCAPG00000013631	LRPPRC	98	42.250	Cavia_aperea
ENSMAMG00000021835	lrpprc	85	46.821	ENSCPOG00000000204	LRPPRC	98	46.417	Cavia_porcellus
ENSMAMG00000021835	lrpprc	98	48.146	ENSCCAG00000031900	LRPPRC	93	58.600	Cebus_capucinus
ENSMAMG00000021835	lrpprc	98	48.246	ENSCATG00000014187	LRPPRC	93	56.693	Cercocebus_atys
ENSMAMG00000021835	lrpprc	98	47.009	ENSCLAG00000005203	LRPPRC	98	46.662	Chinchilla_lanigera
ENSMAMG00000021835	lrpprc	98	48.385	ENSCSAG00000013233	LRPPRC	98	47.814	Chlorocebus_sabaeus
ENSMAMG00000021835	lrpprc	82	49.944	ENSCHOG00000003631	LRPPRC	82	49.944	Choloepus_hoffmanni
ENSMAMG00000021835	lrpprc	85	61.765	ENSCANG00000034961	LRPPRC	96	61.011	Colobus_angolensis_palliatus
ENSMAMG00000021835	lrpprc	98	47.667	ENSCGRG00001016261	Lrpprc	98	47.228	Cricetulus_griseus_chok1gshd
ENSMAMG00000021835	lrpprc	98	47.667	ENSCGRG00000004072	Lrpprc	98	47.228	Cricetulus_griseus_crigri
ENSMAMG00000021835	lrpprc	98	50.610	ENSCSEG00000003850	lrpprc	97	60.121	Cynoglossus_semilaevis
ENSMAMG00000021835	lrpprc	98	65.507	ENSCVAG00000012967	lrpprc	98	65.522	Cyprinodon_variegatus
ENSMAMG00000021835	lrpprc	98	54.146	ENSDARG00000043970	lrpprc	97	54.003	Danio_rerio
ENSMAMG00000021835	lrpprc	98	48.169	ENSDNOG00000012594	-	98	47.974	Dasypus_novemcinctus
ENSMAMG00000021835	lrpprc	83	39.336	ENSDNOG00000032336	-	98	39.336	Dasypus_novemcinctus
ENSMAMG00000021835	lrpprc	95	49.479	ENSDORG00000012233	Lrpprc	98	48.135	Dipodomys_ordii
ENSMAMG00000021835	lrpprc	98	47.701	ENSETEG00000006657	LRPPRC	98	47.414	Echinops_telfairi
ENSMAMG00000021835	lrpprc	76	52.539	ENSEEUG00000012340	LRPPRC	77	52.539	Erinaceus_europaeus
ENSMAMG00000021835	lrpprc	85	74.328	ENSELUG00000012803	lrpprc	89	74.328	Esox_lucius
ENSMAMG00000021835	lrpprc	98	49.284	ENSFCAG00000013468	LRPPRC	98	48.958	Felis_catus
ENSMAMG00000021835	lrpprc	94	46.884	ENSFALG00000012738	LRPPRC	97	46.366	Ficedula_albicollis
ENSMAMG00000021835	lrpprc	98	46.482	ENSFDAG00000015328	LRPPRC	98	46.203	Fukomys_damarensis
ENSMAMG00000021835	lrpprc	98	64.523	ENSFHEG00000019604	lrpprc	98	64.387	Fundulus_heteroclitus
ENSMAMG00000021835	lrpprc	98	59.469	ENSGMOG00000008337	lrpprc	98	59.643	Gadus_morhua
ENSMAMG00000021835	lrpprc	98	63.649	ENSGAFG00000001455	lrpprc	98	63.559	Gambusia_affinis
ENSMAMG00000021835	lrpprc	98	65.145	ENSGACG00000010679	lrpprc	98	65.582	Gasterosteus_aculeatus
ENSMAMG00000021835	lrpprc	98	66.856	ENSHBUG00000000393	lrpprc	96	66.524	Haplochromis_burtoni
ENSMAMG00000021835	lrpprc	98	47.089	ENSHGLG00000006123	LRPPRC	98	47.063	Heterocephalus_glaber_female
ENSMAMG00000021835	lrpprc	54	45.375	ENSHGLG00100005960	-	94	45.120	Heterocephalus_glaber_male
ENSMAMG00000021835	lrpprc	97	63.591	ENSHCOG00000002107	lrpprc	100	63.591	Hippocampus_comes
ENSMAMG00000021835	lrpprc	98	56.872	ENSIPUG00000009406	lrpprc	97	56.740	Ictalurus_punctatus
ENSMAMG00000021835	lrpprc	98	48.575	ENSSTOG00000011185	LRPPRC	98	48.491	Ictidomys_tridecemlineatus
ENSMAMG00000021835	lrpprc	98	47.826	ENSJJAG00000020475	Lrpprc	98	47.629	Jaculus_jaculus
ENSMAMG00000021835	lrpprc	97	56.619	ENSKMAG00000003287	lrpprc	83	56.345	Kryptolebias_marmoratus
ENSMAMG00000021835	lrpprc	98	60.641	ENSLBEG00000023225	lrpprc	97	73.347	Labrus_bergylta
ENSMAMG00000021835	lrpprc	98	54.175	ENSLACG00000014030	LRPPRC	98	53.928	Latimeria_chalumnae
ENSMAMG00000021835	lrpprc	98	55.734	ENSLOCG00000016390	lrpprc	96	55.384	Lepisosteus_oculatus
ENSMAMG00000021835	lrpprc	98	46.230	ENSLAFG00000008614	LRPPRC	98	46.032	Loxodonta_africana
ENSMAMG00000021835	lrpprc	98	48.629	ENSMFAG00000041560	LRPPRC	96	61.011	Macaca_fascicularis
ENSMAMG00000021835	lrpprc	96	49.332	ENSMMUG00000019841	LRPPRC	96	61.011	Macaca_mulatta
ENSMAMG00000021835	lrpprc	98	48.619	ENSMNEG00000031613	LRPPRC	93	56.299	Macaca_nemestrina
ENSMAMG00000021835	lrpprc	98	66.785	ENSMZEG00005027379	lrpprc	98	66.453	Maylandia_zebra
ENSMAMG00000021835	lrpprc	98	47.636	ENSMAUG00000012118	Lrpprc	98	47.513	Mesocricetus_auratus
ENSMAMG00000021835	lrpprc	97	47.605	ENSMICG00000010486	LRPPRC	93	56.299	Microcebus_murinus
ENSMAMG00000021835	lrpprc	98	48.610	ENSMOCG00000006048	Lrpprc	98	48.098	Microtus_ochrogaster
ENSMAMG00000021835	lrpprc	98	67.705	ENSMMOG00000007830	lrpprc	95	76.367	Mola_mola
ENSMAMG00000021835	lrpprc	94	48.629	ENSMODG00000000648	LRPPRC	98	47.982	Monodelphis_domestica
ENSMAMG00000021835	lrpprc	98	65.623	ENSMALG00000001271	lrpprc	97	65.520	Monopterus_albus
ENSMAMG00000021835	lrpprc	98	48.567	ENSMPUG00000011800	LRPPRC	99	50.661	Mustela_putorius_furo
ENSMAMG00000021835	lrpprc	97	48.844	ENSMLUG00000010575	LRPPRC	98	48.779	Myotis_lucifugus
ENSMAMG00000021835	lrpprc	98	47.518	ENSNGAG00000013069	Lrpprc	98	47.391	Nannospalax_galili
ENSMAMG00000021835	lrpprc	93	67.237	ENSNBRG00000013202	lrpprc	92	78.194	Neolamprologus_brichardi
ENSMAMG00000021835	lrpprc	98	48.306	ENSNLEG00000016782	LRPPRC	93	57.677	Nomascus_leucogenys
ENSMAMG00000021835	lrpprc	79	56.828	ENSOPRG00000016774	LRPPRC	81	56.828	Ochotona_princeps
ENSMAMG00000021835	lrpprc	95	48.519	ENSODEG00000011211	LRPPRC	98	47.323	Octodon_degus
ENSMAMG00000021835	lrpprc	98	66.785	ENSONIG00000000917	lrpprc	98	66.185	Oreochromis_niloticus
ENSMAMG00000021835	lrpprc	56	46.787	ENSOANG00000014670	-	99	46.787	Ornithorhynchus_anatinus
ENSMAMG00000021835	lrpprc	98	47.346	ENSOCUG00000015046	LRPPRC	94	47.308	Oryctolagus_cuniculus
ENSMAMG00000021835	lrpprc	85	79.730	ENSORLG00000004605	lrpprc	90	79.730	Oryzias_latipes
ENSMAMG00000021835	lrpprc	90	63.432	ENSORLG00020012536	lrpprc	99	62.864	Oryzias_latipes_hni
ENSMAMG00000021835	lrpprc	89	75.246	ENSORLG00015018270	lrpprc	92	76.289	Oryzias_latipes_hsok
ENSMAMG00000021835	lrpprc	99	47.761	ENSOGAG00000012798	LRPPRC	98	47.810	Otolemur_garnettii
ENSMAMG00000021835	lrpprc	95	48.998	ENSOARG00000006522	LRPPRC	98	47.814	Ovis_aries
ENSMAMG00000021835	lrpprc	98	48.175	ENSPPAG00000040876	LRPPRC	93	57.769	Pan_paniscus
ENSMAMG00000021835	lrpprc	98	49.213	ENSPPRG00000006578	LRPPRC	98	49.063	Panthera_pardus
ENSMAMG00000021835	lrpprc	95	50.223	ENSPTIG00000000933	LRPPRC	95	49.851	Panthera_tigris_altaica
ENSMAMG00000021835	lrpprc	98	48.567	ENSPTRG00000011880	LRPPRC	93	57.171	Pan_troglodytes
ENSMAMG00000021835	lrpprc	98	48.463	ENSPANG00000020731	LRPPRC	93	56.102	Papio_anubis
ENSMAMG00000021835	lrpprc	88	60.626	ENSPKIG00000022232	lrpprc	94	60.626	Paramormyrops_kingsleyae
ENSMAMG00000021835	lrpprc	54	49.562	ENSPSIG00000006830	-	91	50.127	Pelodiscus_sinensis
ENSMAMG00000021835	lrpprc	54	65.776	ENSPMGG00000016597	lrpprc	87	65.032	Periophthalmus_magnuspinnatus
ENSMAMG00000021835	lrpprc	93	42.555	ENSPMAG00000002147	lrpprc	98	42.182	Petromyzon_marinus
ENSMAMG00000021835	lrpprc	98	63.121	ENSPFOG00000011227	lrpprc	98	63.386	Poecilia_formosa
ENSMAMG00000021835	lrpprc	98	63.281	ENSPLAG00000004018	lrpprc	98	63.331	Poecilia_latipinna
ENSMAMG00000021835	lrpprc	98	62.979	ENSPMEG00000016425	lrpprc	98	63.098	Poecilia_mexicana
ENSMAMG00000021835	lrpprc	98	63.352	ENSPREG00000003662	lrpprc	98	63.064	Poecilia_reticulata
ENSMAMG00000021835	lrpprc	53	45.397	ENSPPYG00000029532	-	98	45.145	Pongo_abelii
ENSMAMG00000021835	lrpprc	81	54.924	ENSPCAG00000001430	LRPPRC	80	55.037	Procavia_capensis
ENSMAMG00000021835	lrpprc	98	46.781	ENSPVAG00000002007	LRPPRC	98	46.575	Pteropus_vampyrus
ENSMAMG00000021835	lrpprc	98	67.570	ENSPNYG00000000756	lrpprc	90	79.204	Pundamilia_nyererei
ENSMAMG00000021835	lrpprc	98	59.618	ENSPNAG00000002895	lrpprc	98	59.459	Pygocentrus_nattereri
ENSMAMG00000021835	lrpprc	98	47.783	ENSRNOG00000005877	Lrpprc	98	47.763	Rattus_norvegicus
ENSMAMG00000021835	lrpprc	98	48.323	ENSRBIG00000031552	LRPPRC	98	47.926	Rhinopithecus_bieti
ENSMAMG00000021835	lrpprc	98	48.286	ENSSBOG00000011807	LRPPRC	93	57.874	Saimiri_boliviensis_boliviensis
ENSMAMG00000021835	lrpprc	94	47.976	ENSSHAG00000018725	LRPPRC	98	47.695	Sarcophilus_harrisii
ENSMAMG00000021835	lrpprc	97	51.089	ENSSFOG00015001042	lrpprc	97	51.197	Scleropages_formosus
ENSMAMG00000021835	lrpprc	98	65.627	ENSSDUG00000019062	lrpprc	97	65.357	Seriola_dumerili
ENSMAMG00000021835	lrpprc	98	53.675	ENSSLDG00000023028	lrpprc	97	54.129	Seriola_lalandi_dorsalis
ENSMAMG00000021835	lrpprc	84	49.528	ENSSARG00000000426	LRPPRC	95	49.528	Sorex_araneus
ENSMAMG00000021835	lrpprc	98	57.371	ENSSPAG00000000162	lrpprc	98	57.323	Stegastes_partitus
ENSMAMG00000021835	lrpprc	98	48.476	ENSSSCG00000008452	LRPPRC	98	48.170	Sus_scrofa
ENSMAMG00000021835	lrpprc	93	46.662	ENSTGUG00000003759	LRPPRC	98	46.362	Taeniopygia_guttata
ENSMAMG00000021835	lrpprc	93	63.575	ENSTRUG00000008409	lrpprc	97	63.740	Takifugu_rubripes
ENSMAMG00000021835	lrpprc	98	63.669	ENSTNIG00000007470	lrpprc	98	63.597	Tetraodon_nigroviridis
ENSMAMG00000021835	lrpprc	98	46.505	ENSTTRG00000006403	LRPPRC	98	46.226	Tursiops_truncatus
ENSMAMG00000021835	lrpprc	80	61.125	ENSVPAG00000008993	LRPPRC	83	61.125	Vicugna_pacos
ENSMAMG00000021835	lrpprc	98	52.014	ENSXETG00000009296	lrpprc	98	51.667	Xenopus_tropicalis
ENSMAMG00000021835	lrpprc	98	62.139	ENSXCOG00000013343	lrpprc	96	72.435	Xiphophorus_couchianus
ENSMAMG00000021835	lrpprc	98	63.636	ENSXMAG00000018108	lrpprc	98	63.597	Xiphophorus_maculatus