EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000021921 (Gene tree)
Gene ID: 113132260
Gene Symbol: si:ch211-117n7.8
Alias: -
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 42961 bases
Position: chrOOHQ01000028.1:18542327-18585287
Accession: 113132260
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000032571	S1	PF00575.23	7.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000033420	-	4756	XM_026310242	ENSMAMP00000032571	994 (aa)	XP_026166027	-

Gene Model

Click here to download ENSMAMG00000021921's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000021921's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000021921	si:ch211-117n7.8	99	50.346	ENSG00000068784	SRBD1	82	56.250	Homo_sapiens
ENSMAMG00000021921	si:ch211-117n7.8	100	79.706	ENSAPOG00000005103	si:ch211-117n7.8	100	78.571	Acanthochromis_polyacanthus
ENSMAMG00000021921	si:ch211-117n7.8	85	55.747	ENSAMEG00000005993	SRBD1	82	56.799	Ailuropoda_melanoleuca
ENSMAMG00000021921	si:ch211-117n7.8	97	80.303	ENSACIG00000009875	si:ch211-117n7.8	100	79.980	Amphilophus_citrinellus
ENSMAMG00000021921	si:ch211-117n7.8	100	78.782	ENSAOCG00000024718	si:ch211-117n7.8	100	78.116	Amphiprion_ocellaris
ENSMAMG00000021921	si:ch211-117n7.8	97	79.959	ENSAPEG00000002645	si:ch211-117n7.8	99	79.265	Amphiprion_percula
ENSMAMG00000021921	si:ch211-117n7.8	100	81.169	ENSATEG00000010844	si:ch211-117n7.8	100	81.169	Anabas_testudineus
ENSMAMG00000021921	si:ch211-117n7.8	86	57.258	ENSAPLG00000006313	SRBD1	82	57.964	Anas_platyrhynchos
ENSMAMG00000021921	si:ch211-117n7.8	85	56.140	ENSANAG00000025573	SRBD1	82	56.490	Aotus_nancymaae
ENSMAMG00000021921	si:ch211-117n7.8	100	81.391	ENSACLG00000024219	si:ch211-117n7.8	100	80.901	Astatotilapia_calliptera
ENSMAMG00000021921	si:ch211-117n7.8	100	63.340	ENSAMXG00000004294	SRBD1	100	63.439	Astyanax_mexicanus
ENSMAMG00000021921	si:ch211-117n7.8	84	56.353	ENSBTAG00000007508	SRBD1	80	56.511	Bos_taurus
ENSMAMG00000021921	si:ch211-117n7.8	84	56.353	ENSCJAG00000000727	SRBD1	82	56.611	Callithrix_jacchus
ENSMAMG00000021921	si:ch211-117n7.8	85	56.009	ENSCAFG00000002554	SRBD1	83	56.407	Canis_familiaris
ENSMAMG00000021921	si:ch211-117n7.8	97	48.473	ENSCAFG00020026284	SRBD1	95	57.143	Canis_lupus_dingo
ENSMAMG00000021921	si:ch211-117n7.8	84	56.840	ENSCHIG00000016535	SRBD1	81	57.023	Capra_hircus
ENSMAMG00000021921	si:ch211-117n7.8	94	52.165	ENSTSYG00000012797	SRBD1	99	50.048	Carlito_syrichta
ENSMAMG00000021921	si:ch211-117n7.8	99	50.000	ENSCPOG00000004773	SRBD1	83	56.326	Cavia_porcellus
ENSMAMG00000021921	si:ch211-117n7.8	85	56.257	ENSCCAG00000025589	SRBD1	82	56.490	Cebus_capucinus
ENSMAMG00000021921	si:ch211-117n7.8	87	55.114	ENSCATG00000039530	SRBD1	82	56.611	Cercocebus_atys
ENSMAMG00000021921	si:ch211-117n7.8	99	50.904	ENSCLAG00000008623	SRBD1	82	57.056	Chinchilla_lanigera
ENSMAMG00000021921	si:ch211-117n7.8	87	55.114	ENSCSAG00000013350	SRBD1	82	56.490	Chlorocebus_sabaeus
ENSMAMG00000021921	si:ch211-117n7.8	75	72.093	ENSCHOG00000003805	SRBD1	68	72.093	Choloepus_hoffmanni
ENSMAMG00000021921	si:ch211-117n7.8	94	53.229	ENSCPBG00000005677	SRBD1	97	52.108	Chrysemys_picta_bellii
ENSMAMG00000021921	si:ch211-117n7.8	79	40.476	ENSCING00000005950	-	99	40.476	Ciona_intestinalis
ENSMAMG00000021921	si:ch211-117n7.8	79	42.478	ENSCSAVG00000000861	-	99	42.478	Ciona_savignyi
ENSMAMG00000021921	si:ch211-117n7.8	87	55.000	ENSCANG00000016307	SRBD1	82	56.490	Colobus_angolensis_palliatus
ENSMAMG00000021921	si:ch211-117n7.8	99	50.499	ENSCGRG00001000513	Srbd1	82	55.879	Cricetulus_griseus_chok1gshd
ENSMAMG00000021921	si:ch211-117n7.8	99	50.499	ENSCGRG00000002283	Srbd1	82	55.879	Cricetulus_griseus_crigri
ENSMAMG00000021921	si:ch211-117n7.8	100	74.177	ENSCSEG00000000856	si:ch211-117n7.8	100	72.485	Cynoglossus_semilaevis
ENSMAMG00000021921	si:ch211-117n7.8	98	77.254	ENSCVAG00000020212	si:ch211-117n7.8	99	76.868	Cyprinodon_variegatus
ENSMAMG00000021921	si:ch211-117n7.8	84	55.439	ENSDNOG00000018686	SRBD1	82	55.370	Dasypus_novemcinctus
ENSMAMG00000021921	si:ch211-117n7.8	99	50.598	ENSDORG00000010468	Srbd1	82	56.280	Dipodomys_ordii
ENSMAMG00000021921	si:ch211-117n7.8	79	35.804	FBgn0051156	CG31156	79	35.804	Drosophila_melanogaster
ENSMAMG00000021921	si:ch211-117n7.8	87	56.545	ENSETEG00000000739	SRBD1	75	56.727	Echinops_telfairi
ENSMAMG00000021921	si:ch211-117n7.8	73	48.276	ENSEBUG00000008902	si:ch211-117n7.8	95	48.276	Eptatretus_burgeri
ENSMAMG00000021921	si:ch211-117n7.8	85	53.972	ENSEASG00005003132	SRBD1	98	55.639	Equus_asinus_asinus
ENSMAMG00000021921	si:ch211-117n7.8	85	55.776	ENSECAG00000013865	SRBD1	81	56.287	Equus_caballus
ENSMAMG00000021921	si:ch211-117n7.8	100	64.818	ENSELUG00000012592	si:ch211-117n7.8	100	64.971	Esox_lucius
ENSMAMG00000021921	si:ch211-117n7.8	86	55.683	ENSFCAG00000005101	SRBD1	86	55.683	Felis_catus
ENSMAMG00000021921	si:ch211-117n7.8	85	56.808	ENSFALG00000012966	SRBD1	81	58.427	Ficedula_albicollis
ENSMAMG00000021921	si:ch211-117n7.8	98	51.224	ENSFDAG00000016670	SRBD1	99	50.907	Fukomys_damarensis
ENSMAMG00000021921	si:ch211-117n7.8	100	77.073	ENSFHEG00000019480	si:ch211-117n7.8	100	76.976	Fundulus_heteroclitus
ENSMAMG00000021921	si:ch211-117n7.8	50	69.953	ENSGMOG00000018010	-	100	69.953	Gadus_morhua
ENSMAMG00000021921	si:ch211-117n7.8	83	58.403	ENSGALG00000009990	SRBD1	83	57.882	Gallus_gallus
ENSMAMG00000021921	si:ch211-117n7.8	100	77.390	ENSGAFG00000019664	si:ch211-117n7.8	100	76.793	Gambusia_affinis
ENSMAMG00000021921	si:ch211-117n7.8	63	82.609	ENSGACG00000010794	si:ch211-117n7.8	100	82.609	Gasterosteus_aculeatus
ENSMAMG00000021921	si:ch211-117n7.8	83	58.026	ENSGAGG00000006166	SRBD1	98	57.623	Gopherus_agassizii
ENSMAMG00000021921	si:ch211-117n7.8	87	55.455	ENSGGOG00000005910	SRBD1	84	56.490	Gorilla_gorilla
ENSMAMG00000021921	si:ch211-117n7.8	97	69.262	ENSHBUG00000013207	si:ch211-117n7.8	100	68.750	Haplochromis_burtoni
ENSMAMG00000021921	si:ch211-117n7.8	99	50.395	ENSHGLG00000018153	-	82	56.606	Heterocephalus_glaber_female
ENSMAMG00000021921	si:ch211-117n7.8	99	50.395	ENSHGLG00100015183	-	96	52.088	Heterocephalus_glaber_male
ENSMAMG00000021921	si:ch211-117n7.8	94	65.437	ENSIPUG00000009661	srbd1	100	62.661	Ictalurus_punctatus
ENSMAMG00000021921	si:ch211-117n7.8	98	51.561	ENSSTOG00000005898	SRBD1	82	57.108	Ictidomys_tridecemlineatus
ENSMAMG00000021921	si:ch211-117n7.8	99	49.051	ENSJJAG00000022244	Srbd1	99	47.843	Jaculus_jaculus
ENSMAMG00000021921	si:ch211-117n7.8	99	79.545	ENSKMAG00000003473	si:ch211-117n7.8	100	78.755	Kryptolebias_marmoratus
ENSMAMG00000021921	si:ch211-117n7.8	100	80.550	ENSLBEG00000027518	si:ch211-117n7.8	100	80.157	Labrus_bergylta
ENSMAMG00000021921	si:ch211-117n7.8	84	57.529	ENSLACG00000009790	SRBD1	97	57.983	Latimeria_chalumnae
ENSMAMG00000021921	si:ch211-117n7.8	84	68.209	ENSLOCG00000016360	si:ch211-117n7.8	99	59.647	Lepisosteus_oculatus
ENSMAMG00000021921	si:ch211-117n7.8	87	55.114	ENSMFAG00000042026	SRBD1	82	56.490	Macaca_fascicularis
ENSMAMG00000021921	si:ch211-117n7.8	87	55.114	ENSMMUG00000003490	SRBD1	82	56.490	Macaca_mulatta
ENSMAMG00000021921	si:ch211-117n7.8	85	54.779	ENSMNEG00000034701	SRBD1	82	54.970	Macaca_nemestrina
ENSMAMG00000021921	si:ch211-117n7.8	87	55.227	ENSMLEG00000000745	SRBD1	82	56.611	Mandrillus_leucophaeus
ENSMAMG00000021921	si:ch211-117n7.8	100	81.587	ENSMZEG00005027369	si:ch211-117n7.8	100	81.097	Maylandia_zebra
ENSMAMG00000021921	si:ch211-117n7.8	80	55.610	ENSMGAG00000010273	SRBD1	99	55.610	Meleagris_gallopavo
ENSMAMG00000021921	si:ch211-117n7.8	78	55.062	ENSMAUG00000013916	Srbd1	95	55.062	Mesocricetus_auratus
ENSMAMG00000021921	si:ch211-117n7.8	85	56.659	ENSMICG00000007835	SRBD1	82	57.074	Microcebus_murinus
ENSMAMG00000021921	si:ch211-117n7.8	99	50.199	ENSMOCG00000018716	Srbd1	82	56.053	Microtus_ochrogaster
ENSMAMG00000021921	si:ch211-117n7.8	97	78.512	ENSMMOG00000007507	si:ch211-117n7.8	100	77.996	Mola_mola
ENSMAMG00000021921	si:ch211-117n7.8	100	81.507	ENSMALG00000001562	si:ch211-117n7.8	100	81.507	Monopterus_albus
ENSMAMG00000021921	si:ch211-117n7.8	97	51.537	MGP_CAROLIEiJ_G0021934	Srbd1	99	57.566	Mus_caroli
ENSMAMG00000021921	si:ch211-117n7.8	99	51.140	ENSMUSG00000024135	Srbd1	97	56.316	Mus_musculus
ENSMAMG00000021921	si:ch211-117n7.8	99	50.545	MGP_PahariEiJ_G0020924	Srbd1	99	50.545	Mus_pahari
ENSMAMG00000021921	si:ch211-117n7.8	99	50.746	MGP_SPRETEiJ_G0022850	Srbd1	99	50.448	Mus_spretus
ENSMAMG00000021921	si:ch211-117n7.8	87	55.950	ENSMLUG00000007039	SRBD1	82	57.143	Myotis_lucifugus
ENSMAMG00000021921	si:ch211-117n7.8	99	48.785	ENSNGAG00000011893	Srbd1	99	47.947	Nannospalax_galili
ENSMAMG00000021921	si:ch211-117n7.8	98	78.963	ENSNBRG00000012873	si:ch211-117n7.8	100	78.433	Neolamprologus_brichardi
ENSMAMG00000021921	si:ch211-117n7.8	85	55.789	ENSNLEG00000016877	SRBD1	82	56.130	Nomascus_leucogenys
ENSMAMG00000021921	si:ch211-117n7.8	84	55.595	ENSODEG00000012095	SRBD1	83	55.704	Octodon_degus
ENSMAMG00000021921	si:ch211-117n7.8	100	81.978	ENSONIG00000000945	si:ch211-117n7.8	98	86.108	Oreochromis_niloticus
ENSMAMG00000021921	si:ch211-117n7.8	85	55.776	ENSOCUG00000015385	SRBD1	82	56.595	Oryctolagus_cuniculus
ENSMAMG00000021921	si:ch211-117n7.8	100	71.526	ENSORLG00000004427	si:ch211-117n7.8	100	70.939	Oryzias_latipes
ENSMAMG00000021921	si:ch211-117n7.8	100	74.219	ENSORLG00020012792	si:ch211-117n7.8	100	73.633	Oryzias_latipes_hni
ENSMAMG00000021921	si:ch211-117n7.8	100	73.998	ENSORLG00015018598	si:ch211-117n7.8	100	73.412	Oryzias_latipes_hsok
ENSMAMG00000021921	si:ch211-117n7.8	99	73.689	ENSOMEG00000012229	si:ch211-117n7.8	99	78.327	Oryzias_melastigma
ENSMAMG00000021921	si:ch211-117n7.8	98	49.096	ENSOGAG00000001076	SRBD1	81	54.733	Otolemur_garnettii
ENSMAMG00000021921	si:ch211-117n7.8	84	52.828	ENSOARG00000005958	SRBD1	83	52.934	Ovis_aries
ENSMAMG00000021921	si:ch211-117n7.8	84	56.169	ENSPPAG00000038442	SRBD1	82	56.250	Pan_paniscus
ENSMAMG00000021921	si:ch211-117n7.8	86	55.632	ENSPPRG00000003449	SRBD1	86	55.632	Panthera_pardus
ENSMAMG00000021921	si:ch211-117n7.8	86	55.632	ENSPTIG00000012495	SRBD1	86	55.632	Panthera_tigris_altaica
ENSMAMG00000021921	si:ch211-117n7.8	84	56.169	ENSPTRG00000011889	SRBD1	82	56.250	Pan_troglodytes
ENSMAMG00000021921	si:ch211-117n7.8	87	55.114	ENSPANG00000008063	SRBD1	82	56.490	Papio_anubis
ENSMAMG00000021921	si:ch211-117n7.8	99	61.117	ENSPKIG00000021973	si:ch211-117n7.8	99	61.268	Paramormyrops_kingsleyae
ENSMAMG00000021921	si:ch211-117n7.8	89	54.254	ENSPSIG00000008992	SRBD1	100	50.882	Pelodiscus_sinensis
ENSMAMG00000021921	si:ch211-117n7.8	98	72.923	ENSPMGG00000013348	si:ch211-117n7.8	99	72.626	Periophthalmus_magnuspinnatus
ENSMAMG00000021921	si:ch211-117n7.8	99	49.366	ENSPEMG00000020684	Srbd1	99	48.585	Peromyscus_maniculatus_bairdii
ENSMAMG00000021921	si:ch211-117n7.8	100	77.537	ENSPFOG00000010650	si:ch211-117n7.8	100	75.665	Poecilia_formosa
ENSMAMG00000021921	si:ch211-117n7.8	100	77.833	ENSPLAG00000002141	si:ch211-117n7.8	100	75.961	Poecilia_latipinna
ENSMAMG00000021921	si:ch211-117n7.8	100	77.635	ENSPMEG00000018537	si:ch211-117n7.8	100	75.764	Poecilia_mexicana
ENSMAMG00000021921	si:ch211-117n7.8	100	76.068	ENSPREG00000003258	si:ch211-117n7.8	100	74.280	Poecilia_reticulata
ENSMAMG00000021921	si:ch211-117n7.8	87	51.170	ENSPPYG00000012444	SRBD1	82	52.242	Pongo_abelii
ENSMAMG00000021921	si:ch211-117n7.8	76	51.447	ENSPCAG00000005629	SRBD1	80	51.447	Procavia_capensis
ENSMAMG00000021921	si:ch211-117n7.8	99	42.997	ENSPCOG00000017669	SRBD1	81	47.681	Propithecus_coquereli
ENSMAMG00000021921	si:ch211-117n7.8	85	49.415	ENSPVAG00000001782	SRBD1	82	49.880	Pteropus_vampyrus
ENSMAMG00000021921	si:ch211-117n7.8	97	77.128	ENSPNYG00000000508	si:ch211-117n7.8	100	76.615	Pundamilia_nyererei
ENSMAMG00000021921	si:ch211-117n7.8	94	67.018	ENSPNAG00000013492	SRBD1	100	64.712	Pygocentrus_nattereri
ENSMAMG00000021921	si:ch211-117n7.8	96	51.187	ENSRNOG00000014720	Srbd1	99	50.647	Rattus_norvegicus
ENSMAMG00000021921	si:ch211-117n7.8	87	54.659	ENSRBIG00000033486	SRBD1	82	56.130	Rhinopithecus_bieti
ENSMAMG00000021921	si:ch211-117n7.8	87	54.659	ENSRROG00000041599	SRBD1	82	56.130	Rhinopithecus_roxellana
ENSMAMG00000021921	si:ch211-117n7.8	85	56.140	ENSSBOG00000024982	SRBD1	82	56.490	Saimiri_boliviensis_boliviensis
ENSMAMG00000021921	si:ch211-117n7.8	97	60.870	ENSSFOG00015001128	si:ch211-117n7.8	99	60.415	Scleropages_formosus
ENSMAMG00000021921	si:ch211-117n7.8	100	80.626	ENSSMAG00000018256	si:ch211-117n7.8	100	80.333	Scophthalmus_maximus
ENSMAMG00000021921	si:ch211-117n7.8	97	82.755	ENSSLDG00000023189	si:ch211-117n7.8	99	82.458	Seriola_lalandi_dorsalis
ENSMAMG00000021921	si:ch211-117n7.8	99	47.348	ENSSARG00000009740	SRBD1	99	47.059	Sorex_araneus
ENSMAMG00000021921	si:ch211-117n7.8	92	54.951	ENSSPUG00000010475	SRBD1	99	54.703	Sphenodon_punctatus
ENSMAMG00000021921	si:ch211-117n7.8	97	75.852	ENSSPAG00000008092	-	99	76.800	Stegastes_partitus
ENSMAMG00000021921	si:ch211-117n7.8	97	51.423	ENSSSCG00000008445	SRBD1	81	56.766	Sus_scrofa
ENSMAMG00000021921	si:ch211-117n7.8	83	57.838	ENSTGUG00000003878	SRBD1	96	58.416	Taeniopygia_guttata
ENSMAMG00000021921	si:ch211-117n7.8	100	74.074	ENSTRUG00000007080	si:ch211-117n7.8	98	79.369	Takifugu_rubripes
ENSMAMG00000021921	si:ch211-117n7.8	98	74.187	ENSTNIG00000007464	si:ch211-117n7.8	98	73.990	Tetraodon_nigroviridis
ENSMAMG00000021921	si:ch211-117n7.8	76	58.201	ENSTTRG00000011871	SRBD1	73	58.201	Tursiops_truncatus
ENSMAMG00000021921	si:ch211-117n7.8	84	56.486	ENSUAMG00000008126	SRBD1	96	55.072	Ursus_americanus
ENSMAMG00000021921	si:ch211-117n7.8	84	56.368	ENSUMAG00000012902	SRBD1	81	56.287	Ursus_maritimus
ENSMAMG00000021921	si:ch211-117n7.8	84	55.647	ENSVPAG00000006825	SRBD1	91	55.967	Vicugna_pacos
ENSMAMG00000021921	si:ch211-117n7.8	97	49.482	ENSVVUG00000005389	SRBD1	83	56.475	Vulpes_vulpes
ENSMAMG00000021921	si:ch211-117n7.8	99	45.532	ENSXETG00000002760	srbd1	100	44.673	Xenopus_tropicalis
ENSMAMG00000021921	si:ch211-117n7.8	100	76.946	ENSXMAG00000016861	si:ch211-117n7.8	100	76.256	Xiphophorus_maculatus