EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000022180 (Gene tree)
Gene ID: 113140051
Gene Symbol: rad54l
Alias: zgc:56289
Full Name: RAD54 like
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 13492 bases
Position: chrOOHQ01000042.1:1058374-1071865
Accession: 113140051
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000032970	ResIII	PF04851.15	1.3e-09	1	1
ENSMAMP00000032966	ResIII	PF04851.15	1.4e-09	1	1
ENSMAMP00000032973	ResIII	PF04851.15	1.5e-09	1	1
ENSMAMP00000032970	DEAD	PF00270.29	7.6e-06	1	1
ENSMAMP00000032966	DEAD	PF00270.29	8.5e-06	1	1
ENSMAMP00000032973	DEAD	PF00270.29	9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000033821	-	3794	-	ENSMAMP00000032966	717 (aa)	-	-
ENSMAMT00000033828	-	3436	XM_026323775	ENSMAMP00000032973	740 (aa)	XP_026179560	UPI000E45D9E3
ENSMAMT00000033825	-	3680	-	ENSMAMP00000032970	679 (aa)	-	UPI000E465261

Gene Model

Click here to download ENSMAMG00000022180's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000022180's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000022180	rad54l	74	30.709	ENSMAMG00000007069	srcap	87	30.315
ENSMAMG00000022180	rad54l	73	32.735	ENSMAMG00000012822	chd1l	52	32.535
ENSMAMG00000022180	rad54l	97	42.611	ENSMAMG00000012269	rad54b	77	42.693
ENSMAMG00000022180	rad54l	73	35.849	ENSMAMG00000009850	hells	64	37.563

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000022180	rad54l	100	82.111	ENSG00000085999	RAD54L	100	89.333	Homo_sapiens
ENSMAMG00000022180	rad54l	100	88.807	ENSAPOG00000011643	rad54l	99	87.415	Acanthochromis_polyacanthus
ENSMAMG00000022180	rad54l	100	81.232	ENSAMEG00000013902	RAD54L	99	78.313	Ailuropoda_melanoleuca
ENSMAMG00000022180	rad54l	99	88.183	ENSACIG00000001939	rad54l	99	86.024	Amphilophus_citrinellus
ENSMAMG00000022180	rad54l	100	92.489	ENSAOCG00000017576	rad54l	100	90.676	Amphiprion_ocellaris
ENSMAMG00000022180	rad54l	100	92.194	ENSAPEG00000020658	rad54l	98	90.986	Amphiprion_percula
ENSMAMG00000022180	rad54l	99	92.467	ENSATEG00000006767	rad54l	99	91.416	Anabas_testudineus
ENSMAMG00000022180	rad54l	99	83.456	ENSAPLG00000006389	RAD54L	99	82.496	Anas_platyrhynchos
ENSMAMG00000022180	rad54l	99	84.638	ENSACAG00000002312	RAD54L	99	81.157	Anolis_carolinensis
ENSMAMG00000022180	rad54l	100	81.965	ENSANAG00000035439	RAD54L	99	79.223	Aotus_nancymaae
ENSMAMG00000022180	rad54l	99	88.166	ENSACLG00000018711	rad54l	99	86.024	Astatotilapia_calliptera
ENSMAMG00000022180	rad54l	99	88.183	ENSAMXG00000012777	rad54l	99	85.521	Astyanax_mexicanus
ENSMAMG00000022180	rad54l	100	81.965	ENSBTAG00000019901	RAD54L	99	79.116	Bos_taurus
ENSMAMG00000022180	rad54l	98	58.754	WBGene00004298	rad-54	84	57.554	Caenorhabditis_elegans
ENSMAMG00000022180	rad54l	99	80.292	ENSCJAG00000021080	RAD54L	95	79.218	Callithrix_jacchus
ENSMAMG00000022180	rad54l	100	81.232	ENSCAFG00000004272	RAD54L	99	78.418	Canis_familiaris
ENSMAMG00000022180	rad54l	100	81.232	ENSCAFG00020015066	RAD54L	99	78.389	Canis_lupus_dingo
ENSMAMG00000022180	rad54l	100	81.818	ENSCHIG00000020118	RAD54L	99	78.954	Capra_hircus
ENSMAMG00000022180	rad54l	100	82.405	ENSTSYG00000002032	RAD54L	99	79.250	Carlito_syrichta
ENSMAMG00000022180	rad54l	100	82.698	ENSCPOG00000006768	RAD54L	99	80.295	Cavia_porcellus
ENSMAMG00000022180	rad54l	100	82.551	ENSCCAG00000025783	RAD54L	99	79.759	Cebus_capucinus
ENSMAMG00000022180	rad54l	100	82.111	ENSCATG00000030589	RAD54L	99	78.983	Cercocebus_atys
ENSMAMG00000022180	rad54l	100	82.551	ENSCLAG00000004645	RAD54L	99	80.187	Chinchilla_lanigera
ENSMAMG00000022180	rad54l	100	81.965	ENSCSAG00000001229	RAD54L	99	79.223	Chlorocebus_sabaeus
ENSMAMG00000022180	rad54l	99	84.195	ENSCPBG00000005675	RAD54L	99	81.377	Chrysemys_picta_bellii
ENSMAMG00000022180	rad54l	99	67.686	ENSCING00000024456	-	99	63.424	Ciona_intestinalis
ENSMAMG00000022180	rad54l	99	67.160	ENSCSAVG00000010859	-	99	62.336	Ciona_savignyi
ENSMAMG00000022180	rad54l	100	82.111	ENSCANG00000034891	RAD54L	99	79.223	Colobus_angolensis_palliatus
ENSMAMG00000022180	rad54l	100	81.965	ENSCGRG00001014807	Rad54l	99	79.301	Cricetulus_griseus_chok1gshd
ENSMAMG00000022180	rad54l	100	81.965	ENSCGRG00000016038	Rad54l	99	79.301	Cricetulus_griseus_crigri
ENSMAMG00000022180	rad54l	99	90.923	ENSCSEG00000001983	rad54l	99	85.617	Cynoglossus_semilaevis
ENSMAMG00000022180	rad54l	94	90.204	ENSCVAG00000019561	rad54l	99	90.204	Cyprinodon_variegatus
ENSMAMG00000022180	rad54l	99	87.574	ENSDARG00000018623	rad54l	99	84.688	Danio_rerio
ENSMAMG00000022180	rad54l	99	81.029	ENSDNOG00000003395	RAD54L	99	78.389	Dasypus_novemcinctus
ENSMAMG00000022180	rad54l	99	76.316	ENSDORG00000002632	Rad54l	99	72.069	Dipodomys_ordii
ENSMAMG00000022180	rad54l	99	57.059	FBgn0002989	okr	95	53.553	Drosophila_melanogaster
ENSMAMG00000022180	rad54l	76	81.472	ENSETEG00000000550	RAD54L	78	76.957	Echinops_telfairi
ENSMAMG00000022180	rad54l	100	81.525	ENSEASG00005004511	RAD54L	97	81.057	Equus_asinus_asinus
ENSMAMG00000022180	rad54l	100	81.672	ENSECAG00000008760	RAD54L	97	81.698	Equus_caballus
ENSMAMG00000022180	rad54l	99	82.196	ENSEEUG00000008113	RAD54L	99	76.644	Erinaceus_europaeus
ENSMAMG00000022180	rad54l	99	88.496	ENSELUG00000002295	rad54l	99	85.734	Esox_lucius
ENSMAMG00000022180	rad54l	100	81.378	ENSFCAG00000003444	RAD54L	99	78.610	Felis_catus
ENSMAMG00000022180	rad54l	99	83.604	ENSFALG00000009480	RAD54L	99	80.189	Ficedula_albicollis
ENSMAMG00000022180	rad54l	100	81.818	ENSFDAG00000007806	RAD54L	99	79.223	Fukomys_damarensis
ENSMAMG00000022180	rad54l	64	85.219	ENSFHEG00000009824	rad54l	83	80.785	Fundulus_heteroclitus
ENSMAMG00000022180	rad54l	100	86.745	ENSGMOG00000014568	rad54l	99	83.762	Gadus_morhua
ENSMAMG00000022180	rad54l	99	83.161	ENSGALG00000010356	RAD54L	92	80.297	Gallus_gallus
ENSMAMG00000022180	rad54l	90	87.296	ENSGAFG00000011110	rad54l	100	85.185	Gambusia_affinis
ENSMAMG00000022180	rad54l	99	91.581	ENSGACG00000003111	rad54l	97	89.445	Gasterosteus_aculeatus
ENSMAMG00000022180	rad54l	99	83.604	ENSGAGG00000014089	RAD54L	96	80.811	Gopherus_agassizii
ENSMAMG00000022180	rad54l	100	81.965	ENSGGOG00000010602	RAD54L	99	78.983	Gorilla_gorilla
ENSMAMG00000022180	rad54l	99	88.314	ENSHBUG00000007793	rad54l	99	86.160	Haplochromis_burtoni
ENSMAMG00000022180	rad54l	100	81.818	ENSHGLG00000000753	RAD54L	99	79.518	Heterocephalus_glaber_female
ENSMAMG00000022180	rad54l	100	81.818	ENSHGLG00100016987	RAD54L	99	79.384	Heterocephalus_glaber_male
ENSMAMG00000022180	rad54l	99	86.854	ENSIPUG00000015999	rad54l	99	86.167	Ictalurus_punctatus
ENSMAMG00000022180	rad54l	100	81.525	ENSSTOG00000029125	RAD54L	99	78.715	Ictidomys_tridecemlineatus
ENSMAMG00000022180	rad54l	97	70.410	ENSJJAG00000000235	-	99	66.488	Jaculus_jaculus
ENSMAMG00000022180	rad54l	99	89.217	ENSKMAG00000009944	rad54l	99	86.856	Kryptolebias_marmoratus
ENSMAMG00000022180	rad54l	99	91.815	ENSLBEG00000014617	rad54l	98	91.324	Labrus_bergylta
ENSMAMG00000022180	rad54l	100	87.629	ENSLOCG00000004144	rad54l	100	85.757	Lepisosteus_oculatus
ENSMAMG00000022180	rad54l	100	81.085	ENSLAFG00000007583	RAD54L	99	78.820	Loxodonta_africana
ENSMAMG00000022180	rad54l	100	82.111	ENSMFAG00000031241	RAD54L	99	78.983	Macaca_fascicularis
ENSMAMG00000022180	rad54l	100	82.111	ENSMMUG00000011568	RAD54L	99	78.983	Macaca_mulatta
ENSMAMG00000022180	rad54l	100	81.965	ENSMNEG00000038562	RAD54L	99	79.223	Macaca_nemestrina
ENSMAMG00000022180	rad54l	100	82.111	ENSMLEG00000038145	RAD54L	99	79.357	Mandrillus_leucophaeus
ENSMAMG00000022180	rad54l	99	88.018	ENSMZEG00005018081	rad54l	99	85.889	Maylandia_zebra
ENSMAMG00000022180	rad54l	99	83.161	ENSMGAG00000010634	RAD54L	99	80.135	Meleagris_gallopavo
ENSMAMG00000022180	rad54l	100	82.111	ENSMAUG00000020076	Rad54l	99	79.463	Mesocricetus_auratus
ENSMAMG00000022180	rad54l	100	82.258	ENSMICG00000003266	RAD54L	99	79.652	Microcebus_murinus
ENSMAMG00000022180	rad54l	100	82.551	ENSMOCG00000001778	Rad54l	99	79.732	Microtus_ochrogaster
ENSMAMG00000022180	rad54l	99	89.069	ENSMALG00000021148	rad54l	99	86.370	Monopterus_albus
ENSMAMG00000022180	rad54l	97	82.246	MGP_CAROLIEiJ_G0026325	Rad54l	99	75.521	Mus_caroli
ENSMAMG00000022180	rad54l	100	81.818	ENSMUSG00000028702	Rad54l	99	79.116	Mus_musculus
ENSMAMG00000022180	rad54l	100	82.111	MGP_PahariEiJ_G0028657	Rad54l	99	79.223	Mus_pahari
ENSMAMG00000022180	rad54l	100	81.818	MGP_SPRETEiJ_G0027297	Rad54l	99	79.116	Mus_spretus
ENSMAMG00000022180	rad54l	99	81.351	ENSMPUG00000012883	RAD54L	99	78.150	Mustela_putorius_furo
ENSMAMG00000022180	rad54l	100	81.818	ENSMLUG00000003763	RAD54L	99	79.060	Myotis_lucifugus
ENSMAMG00000022180	rad54l	100	81.818	ENSNGAG00000024213	Rad54l	99	79.195	Nannospalax_galili
ENSMAMG00000022180	rad54l	100	82.111	ENSNLEG00000016548	RAD54L	99	78.983	Nomascus_leucogenys
ENSMAMG00000022180	rad54l	99	78.539	ENSMEUG00000006793	RAD54L	99	78.539	Notamacropus_eugenii
ENSMAMG00000022180	rad54l	90	81.754	ENSOPRG00000016016	RAD54L	90	81.754	Ochotona_princeps
ENSMAMG00000022180	rad54l	100	82.551	ENSODEG00000008519	RAD54L	99	80.027	Octodon_degus
ENSMAMG00000022180	rad54l	99	88.018	ENSONIG00000007659	rad54l	99	85.889	Oreochromis_niloticus
ENSMAMG00000022180	rad54l	99	82.353	ENSOCUG00000005229	RAD54L	99	79.491	Oryctolagus_cuniculus
ENSMAMG00000022180	rad54l	99	88.018	ENSORLG00000002958	rad54l	99	84.688	Oryzias_latipes
ENSMAMG00000022180	rad54l	99	88.018	ENSORLG00020006554	rad54l	99	88.018	Oryzias_latipes_hni
ENSMAMG00000022180	rad54l	99	88.018	ENSORLG00015002907	rad54l	99	84.824	Oryzias_latipes_hsok
ENSMAMG00000022180	rad54l	99	88.905	ENSOMEG00000007770	rad54l	99	85.637	Oryzias_melastigma
ENSMAMG00000022180	rad54l	100	81.845	ENSOARG00000002264	RAD54L	99	79.011	Ovis_aries
ENSMAMG00000022180	rad54l	100	81.965	ENSPPAG00000031222	RAD54L	99	78.983	Pan_paniscus
ENSMAMG00000022180	rad54l	100	81.378	ENSPPRG00000010317	RAD54L	99	78.476	Panthera_pardus
ENSMAMG00000022180	rad54l	100	81.378	ENSPTIG00000012200	RAD54L	99	78.476	Panthera_tigris_altaica
ENSMAMG00000022180	rad54l	100	81.965	ENSPTRG00000000689	RAD54L	99	78.983	Pan_troglodytes
ENSMAMG00000022180	rad54l	100	82.111	ENSPANG00000016295	RAD54L	99	79.357	Papio_anubis
ENSMAMG00000022180	rad54l	99	82.265	ENSPKIG00000016172	rad54l	99	78.138	Paramormyrops_kingsleyae
ENSMAMG00000022180	rad54l	99	84.490	ENSPSIG00000003258	RAD54L	99	81.421	Pelodiscus_sinensis
ENSMAMG00000022180	rad54l	99	84.421	ENSPMGG00000016335	rad54l	99	80.162	Periophthalmus_magnuspinnatus
ENSMAMG00000022180	rad54l	100	82.111	ENSPEMG00000011422	Rad54l	99	79.570	Peromyscus_maniculatus_bairdii
ENSMAMG00000022180	rad54l	99	71.450	ENSPMAG00000007719	rad54l	99	68.108	Petromyzon_marinus
ENSMAMG00000022180	rad54l	99	82.127	ENSPCIG00000029032	RAD54L	99	79.352	Phascolarctos_cinereus
ENSMAMG00000022180	rad54l	90	87.948	ENSPFOG00000013732	rad54l	100	87.107	Poecilia_formosa
ENSMAMG00000022180	rad54l	90	85.227	ENSPLAG00000023416	rad54l	100	85.413	Poecilia_latipinna
ENSMAMG00000022180	rad54l	90	87.948	ENSPMEG00000008299	rad54l	100	85.481	Poecilia_mexicana
ENSMAMG00000022180	rad54l	99	86.854	ENSPREG00000019955	rad54l	99	84.688	Poecilia_reticulata
ENSMAMG00000022180	rad54l	100	68.668	ENSPPYG00000001398	RAD54L	99	66.667	Pongo_abelii
ENSMAMG00000022180	rad54l	80	82.039	ENSPCAG00000005323	RAD54L	80	82.039	Procavia_capensis
ENSMAMG00000022180	rad54l	100	81.965	ENSPCOG00000015423	RAD54L	99	79.518	Propithecus_coquereli
ENSMAMG00000022180	rad54l	99	86.637	ENSPNYG00000002942	rad54l	95	86.637	Pundamilia_nyererei
ENSMAMG00000022180	rad54l	99	87.445	ENSPNAG00000012483	rad54l	99	84.553	Pygocentrus_nattereri
ENSMAMG00000022180	rad54l	100	82.111	ENSRNOG00000013148	Rad54l	99	79.250	Rattus_norvegicus
ENSMAMG00000022180	rad54l	100	82.111	ENSRBIG00000043495	RAD54L	99	79.116	Rhinopithecus_bieti
ENSMAMG00000022180	rad54l	100	82.111	ENSRROG00000020844	RAD54L	99	79.357	Rhinopithecus_roxellana
ENSMAMG00000022180	rad54l	88	49.379	YGL163C	RAD54	71	50.155	Saccharomyces_cerevisiae
ENSMAMG00000022180	rad54l	100	82.551	ENSSBOG00000024672	RAD54L	99	79.759	Saimiri_boliviensis_boliviensis
ENSMAMG00000022180	rad54l	100	82.232	ENSSHAG00000000110	RAD54L	99	79.357	Sarcophilus_harrisii
ENSMAMG00000022180	rad54l	99	91.728	ENSSDUG00000019147	rad54l	99	89.702	Seriola_dumerili
ENSMAMG00000022180	rad54l	99	91.728	ENSSLDG00000012330	rad54l	99	89.837	Seriola_lalandi_dorsalis
ENSMAMG00000022180	rad54l	81	85.353	ENSSARG00000006689	RAD54L	100	78.365	Sorex_araneus
ENSMAMG00000022180	rad54l	100	91.605	ENSSPAG00000011016	rad54l	100	89.324	Stegastes_partitus
ENSMAMG00000022180	rad54l	100	81.965	ENSSSCG00000003905	RAD54L	99	78.954	Sus_scrofa
ENSMAMG00000022180	rad54l	99	83.752	ENSTGUG00000008233	RAD54L	99	80.432	Taeniopygia_guttata
ENSMAMG00000022180	rad54l	99	88.410	ENSTRUG00000008410	rad54l	96	87.830	Takifugu_rubripes
ENSMAMG00000022180	rad54l	99	85.229	ENSTNIG00000004716	rad54l	99	81.140	Tetraodon_nigroviridis
ENSMAMG00000022180	rad54l	99	79.764	ENSTTRG00000006315	RAD54L	99	74.431	Tursiops_truncatus
ENSMAMG00000022180	rad54l	100	81.525	ENSUAMG00000011824	RAD54L	99	78.302	Ursus_americanus
ENSMAMG00000022180	rad54l	100	80.205	ENSUMAG00000023603	RAD54L	99	77.089	Ursus_maritimus
ENSMAMG00000022180	rad54l	100	81.085	ENSVVUG00000007201	RAD54L	99	78.284	Vulpes_vulpes
ENSMAMG00000022180	rad54l	99	77.059	ENSXETG00000004369	rad54l	99	76.056	Xenopus_tropicalis
ENSMAMG00000022180	rad54l	51	87.106	ENSXCOG00000016028	rad54l	84	84.197	Xiphophorus_couchianus