EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000022930 (Gene tree)
Gene ID: 113121622
Gene Symbol: shrprbck1r
Alias: sipl1-rbck1|zgc:175152
Full Name: ranBP-type and C3HC4-type zinc finger-containing protein 1
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 9582 bases
Position: chrOOHQ01000089.1:5531215-5540796
Accession: 113121622
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000034106	zf-RanBP	PF00641.18	2.4e-06	1	1
ENSMAMP00000034105	zf-RanBP	PF00641.18	2.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000034974	-	3338	-	ENSMAMP00000034105	703 (aa)	XP_026148075	UPI000E4581B1
ENSMAMT00000034975	-	2100	-	ENSMAMP00000034106	699 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000022930's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000022930's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000022930	shrprbck1r	51	70.968	ENSMAMG00000014645	sharpin	92	70.968

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000022930	shrprbck1r	60	56.912	ENSAPOG00000023352	sharpin	95	56.613	Acanthochromis_polyacanthus
ENSMAMG00000022930	shrprbck1r	100	82.058	ENSAPOG00000022737	shrprbck1r	100	81.919	Acanthochromis_polyacanthus
ENSMAMG00000022930	shrprbck1r	100	81.294	ENSACIG00000002184	shrprbck1r	100	81.294	Amphilophus_citrinellus
ENSMAMG00000022930	shrprbck1r	100	84.712	ENSAOCG00000002890	shrprbck1r	100	84.712	Amphiprion_ocellaris
ENSMAMG00000022930	shrprbck1r	60	57.373	ENSAOCG00000017464	sharpin	95	57.077	Amphiprion_ocellaris
ENSMAMG00000022930	shrprbck1r	60	57.373	ENSAPEG00000004049	sharpin	95	57.077	Amphiprion_percula
ENSMAMG00000022930	shrprbck1r	100	82.817	ENSAPEG00000023274	shrprbck1r	100	82.560	Amphiprion_percula
ENSMAMG00000022930	shrprbck1r	100	84.419	ENSATEG00000014561	shrprbck1r	100	84.419	Anabas_testudineus
ENSMAMG00000022930	shrprbck1r	60	57.674	ENSATEG00000007832	sharpin	88	57.209	Anabas_testudineus
ENSMAMG00000022930	shrprbck1r	100	81.857	ENSACLG00000022609	shrprbck1r	100	81.857	Astatotilapia_calliptera
ENSMAMG00000022930	shrprbck1r	100	68.665	ENSAMXG00000021016	shrprbck1r	100	68.622	Astyanax_mexicanus
ENSMAMG00000022930	shrprbck1r	55	56.883	ENSAMXG00000006229	sharpin	97	56.883	Astyanax_mexicanus
ENSMAMG00000022930	shrprbck1r	100	76.879	ENSCSEG00000011306	shrprbck1r	100	76.879	Cynoglossus_semilaevis
ENSMAMG00000022930	shrprbck1r	100	79.155	ENSCVAG00000007250	shrprbck1r	100	78.873	Cyprinodon_variegatus
ENSMAMG00000022930	shrprbck1r	65	51.566	ENSCVAG00000006586	sharpin	99	51.368	Cyprinodon_variegatus
ENSMAMG00000022930	shrprbck1r	100	69.167	ENSDARG00000059871	shrprbck1r	100	69.167	Danio_rerio
ENSMAMG00000022930	shrprbck1r	55	54.499	ENSDARG00000076995	sharpin	94	53.964	Danio_rerio
ENSMAMG00000022930	shrprbck1r	100	72.905	ENSELUG00000016022	shrprbck1r	100	72.765	Esox_lucius
ENSMAMG00000022930	shrprbck1r	65	53.079	ENSFHEG00000013564	sharpin	98	52.229	Fundulus_heteroclitus
ENSMAMG00000022930	shrprbck1r	53	58.084	ENSGMOG00000010123	sharpin	90	58.154	Gadus_morhua
ENSMAMG00000022930	shrprbck1r	100	77.887	ENSGAFG00000009309	shrprbck1r	100	77.606	Gambusia_affinis
ENSMAMG00000022930	shrprbck1r	60	44.630	ENSGAFG00000021405	sharpin	95	43.780	Gambusia_affinis
ENSMAMG00000022930	shrprbck1r	75	80.718	ENSGACG00000002544	shrprbck1r	100	80.718	Gasterosteus_aculeatus
ENSMAMG00000022930	shrprbck1r	100	81.857	ENSHBUG00000021933	shrprbck1r	100	81.857	Haplochromis_burtoni
ENSMAMG00000022930	shrprbck1r	60	52.969	ENSHCOG00000018847	sharpin	80	52.506	Hippocampus_comes
ENSMAMG00000022930	shrprbck1r	54	55.754	ENSIPUG00000011951	sharpin	95	77.419	Ictalurus_punctatus
ENSMAMG00000022930	shrprbck1r	97	67.385	ENSIPUG00000014247	shrprbck1r	100	65.517	Ictalurus_punctatus
ENSMAMG00000022930	shrprbck1r	100	77.701	ENSKMAG00000015215	shrprbck1r	100	77.778	Kryptolebias_marmoratus
ENSMAMG00000022930	shrprbck1r	60	57.512	ENSKMAG00000015204	sharpin	76	57.042	Kryptolebias_marmoratus
ENSMAMG00000022930	shrprbck1r	60	56.948	ENSLBEG00000016624	sharpin	96	56.264	Labrus_bergylta
ENSMAMG00000022930	shrprbck1r	100	83.380	ENSLBEG00000016876	shrprbck1r	100	83.380	Labrus_bergylta
ENSMAMG00000022930	shrprbck1r	95	52.111	ENSLACG00000010948	-	97	52.111	Latimeria_chalumnae
ENSMAMG00000022930	shrprbck1r	100	68.056	ENSLOCG00000008910	shrprbck1r	100	68.194	Lepisosteus_oculatus
ENSMAMG00000022930	shrprbck1r	100	81.716	ENSMZEG00005021257	shrprbck1r	100	81.716	Maylandia_zebra
ENSMAMG00000022930	shrprbck1r	51	60.000	ENSMMOG00000016788	sharpin	89	67.442	Mola_mola
ENSMAMG00000022930	shrprbck1r	100	78.121	ENSMMOG00000003764	shrprbck1r	100	78.121	Mola_mola
ENSMAMG00000022930	shrprbck1r	51	70.968	ENSMALG00000020528	sharpin	93	70.968	Monopterus_albus
ENSMAMG00000022930	shrprbck1r	96	84.683	ENSMALG00000008861	shrprbck1r	95	84.683	Monopterus_albus
ENSMAMG00000022930	shrprbck1r	100	82.138	ENSNBRG00000002270	shrprbck1r	100	82.138	Neolamprologus_brichardi
ENSMAMG00000022930	shrprbck1r	100	81.921	ENSONIG00000014401	shrprbck1r	100	81.921	Oreochromis_niloticus
ENSMAMG00000022930	shrprbck1r	55	55.283	ENSONIG00000009626	-	97	55.037	Oreochromis_niloticus
ENSMAMG00000022930	shrprbck1r	100	78.169	ENSORLG00000007392	shrprbck1r	100	77.606	Oryzias_latipes
ENSMAMG00000022930	shrprbck1r	60	54.695	ENSORLG00000017281	sharpin	95	54.567	Oryzias_latipes
ENSMAMG00000022930	shrprbck1r	100	77.606	ENSORLG00020018619	shrprbck1r	100	77.042	Oryzias_latipes_hni
ENSMAMG00000022930	shrprbck1r	60	54.801	ENSORLG00020000801	sharpin	95	54.673	Oryzias_latipes_hni
ENSMAMG00000022930	shrprbck1r	60	54.460	ENSORLG00015009860	sharpin	95	54.333	Oryzias_latipes_hsok
ENSMAMG00000022930	shrprbck1r	100	77.606	ENSORLG00015018865	shrprbck1r	100	77.465	Oryzias_latipes_hsok
ENSMAMG00000022930	shrprbck1r	100	78.451	ENSOMEG00000012749	shrprbck1r	100	78.169	Oryzias_melastigma
ENSMAMG00000022930	shrprbck1r	50	74.074	ENSOMEG00000005729	sharpin	85	76.923	Oryzias_melastigma
ENSMAMG00000022930	shrprbck1r	100	69.874	ENSPKIG00000006933	shrprbck1r	100	69.874	Paramormyrops_kingsleyae
ENSMAMG00000022930	shrprbck1r	66	57.531	ENSPKIG00000018308	-	96	57.741	Paramormyrops_kingsleyae
ENSMAMG00000022930	shrprbck1r	100	76.130	ENSPMGG00000013254	shrprbck1r	100	75.989	Periophthalmus_magnuspinnatus
ENSMAMG00000022930	shrprbck1r	60	53.653	ENSPFOG00000015253	sharpin	95	52.740	Poecilia_formosa
ENSMAMG00000022930	shrprbck1r	100	78.732	ENSPFOG00000004214	shrprbck1r	100	78.592	Poecilia_formosa
ENSMAMG00000022930	shrprbck1r	100	78.451	ENSPLAG00000020523	shrprbck1r	100	78.310	Poecilia_latipinna
ENSMAMG00000022930	shrprbck1r	60	53.881	ENSPLAG00000000423	sharpin	95	52.968	Poecilia_latipinna
ENSMAMG00000022930	shrprbck1r	56	46.565	ENSPMEG00000023030	sharpin	89	41.727	Poecilia_mexicana
ENSMAMG00000022930	shrprbck1r	100	77.542	ENSPMEG00000006877	shrprbck1r	100	77.401	Poecilia_mexicana
ENSMAMG00000022930	shrprbck1r	65	51.681	ENSPREG00000009702	sharpin	99	50.630	Poecilia_reticulata
ENSMAMG00000022930	shrprbck1r	100	76.771	ENSPREG00000014689	shrprbck1r	100	76.629	Poecilia_reticulata
ENSMAMG00000022930	shrprbck1r	100	82.278	ENSPNYG00000022601	shrprbck1r	100	82.278	Pundamilia_nyererei
ENSMAMG00000022930	shrprbck1r	100	67.490	ENSPNAG00000007847	shrprbck1r	100	67.400	Pygocentrus_nattereri
ENSMAMG00000022930	shrprbck1r	55	54.830	ENSPNAG00000002911	sharpin	99	54.948	Pygocentrus_nattereri
ENSMAMG00000022930	shrprbck1r	78	63.071	ENSSFOG00015014150	-	99	61.775	Scleropages_formosus
ENSMAMG00000022930	shrprbck1r	59	65.972	ENSSFOG00015004028	sharpin	99	52.716	Scleropages_formosus
ENSMAMG00000022930	shrprbck1r	100	80.000	ENSSMAG00000018085	shrprbck1r	100	80.000	Scophthalmus_maximus
ENSMAMG00000022930	shrprbck1r	60	45.176	ENSSDUG00000019039	sharpin	96	44.706	Seriola_dumerili
ENSMAMG00000022930	shrprbck1r	100	87.394	ENSSDUG00000002959	shrprbck1r	100	87.394	Seriola_dumerili
ENSMAMG00000022930	shrprbck1r	100	86.037	ENSSLDG00000009026	shrprbck1r	100	86.037	Seriola_lalandi_dorsalis
ENSMAMG00000022930	shrprbck1r	96	82.507	ENSSPAG00000016097	shrprbck1r	99	82.362	Stegastes_partitus
ENSMAMG00000022930	shrprbck1r	60	52.582	ENSTRUG00000011046	sharpin	96	51.643	Takifugu_rubripes
ENSMAMG00000022930	shrprbck1r	100	78.531	ENSTRUG00000006949	shrprbck1r	100	78.531	Takifugu_rubripes
ENSMAMG00000022930	shrprbck1r	55	55.890	ENSTNIG00000008521	sharpin	94	55.388	Tetraodon_nigroviridis
ENSMAMG00000022930	shrprbck1r	60	43.437	ENSXCOG00000015019	sharpin	88	74.074	Xiphophorus_couchianus
ENSMAMG00000022930	shrprbck1r	100	76.238	ENSXCOG00000006701	shrprbck1r	100	76.096	Xiphophorus_couchianus
ENSMAMG00000022930	shrprbck1r	100	76.096	ENSXMAG00000018972	shrprbck1r	100	75.955	Xiphophorus_maculatus
ENSMAMG00000022930	shrprbck1r	65	51.789	ENSXMAG00000022076	sharpin	99	50.526	Xiphophorus_maculatus