EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000023322 (Gene tree)
Gene ID: 113141442
Gene Symbol: srl
Alias: im:6899248|wu:fb94b10|zgc:153844
Full Name: sarcalumenin
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 8214 bases
Position: chrOOHQ01000092.1:15566178-15574391
Accession: ZDB-GENE-061110-91
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000034727	MMR_HSR1	PF01926.23	1.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000035621	-	1416	-	ENSMAMP00000034727	471 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000023322's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000023322's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000023322	srl	79	33.512	ENSMAMG00000014744	ehd3	69	33.766
ENSMAMG00000023322	srl	54	38.824	ENSMAMG00000004890	-	56	35.714
ENSMAMG00000023322	srl	85	31.762	ENSMAMG00000000024	ehd4	71	31.762
ENSMAMG00000023322	srl	82	31.701	ENSMAMG00000021737	ehd1a	70	31.701
ENSMAMG00000023322	srl	94	76.211	ENSMAMG00000013756	SRL	53	76.211

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000023322	srl	94	83.484	ENSG00000185739	SRL	99	83.721	Homo_sapiens
ENSMAMG00000023322	srl	99	95.503	ENSAPOG00000018093	srl	99	97.959	Acanthochromis_polyacanthus
ENSMAMG00000023322	srl	94	76.975	ENSAPOG00000012432	SRL	99	76.975	Acanthochromis_polyacanthus
ENSMAMG00000023322	srl	94	82.805	ENSAMEG00000010862	SRL	50	82.805	Ailuropoda_melanoleuca
ENSMAMG00000023322	srl	95	75.000	ENSACIG00000015419	SRL	99	75.450	Amphilophus_citrinellus
ENSMAMG00000023322	srl	96	96.674	ENSACIG00000015799	srl	100	96.674	Amphilophus_citrinellus
ENSMAMG00000023322	srl	92	98.387	ENSAOCG00000007574	srl	100	98.387	Amphiprion_ocellaris
ENSMAMG00000023322	srl	94	77.252	ENSAOCG00000017049	SRL	97	77.477	Amphiprion_ocellaris
ENSMAMG00000023322	srl	94	73.138	ENSAPEG00000006533	SRL	96	74.324	Amphiprion_percula
ENSMAMG00000023322	srl	99	95.717	ENSAPEG00000006911	srl	99	95.717	Amphiprion_percula
ENSMAMG00000023322	srl	94	76.316	ENSATEG00000009643	SRL	52	76.535	Anabas_testudineus
ENSMAMG00000023322	srl	99	96.567	ENSATEG00000024315	srl	99	96.567	Anabas_testudineus
ENSMAMG00000023322	srl	94	82.781	ENSACAG00000016380	SRL	84	82.456	Anolis_carolinensis
ENSMAMG00000023322	srl	99	94.218	ENSACLG00000027685	srl	97	97.072	Astatotilapia_calliptera
ENSMAMG00000023322	srl	96	73.866	ENSACLG00000024674	SRL	57	74.561	Astatotilapia_calliptera
ENSMAMG00000023322	srl	89	78.333	ENSAMXG00000038693	SRL	100	74.393	Astyanax_mexicanus
ENSMAMG00000023322	srl	99	90.832	ENSAMXG00000018789	srl	92	90.812	Astyanax_mexicanus
ENSMAMG00000023322	srl	96	82.522	ENSBTAG00000001078	SRL	56	83.900	Bos_taurus
ENSMAMG00000023322	srl	94	83.258	ENSCJAG00000019750	SRL	93	83.258	Callithrix_jacchus
ENSMAMG00000023322	srl	97	80.568	ENSCAFG00000019233	SRL	82	82.805	Canis_familiaris
ENSMAMG00000023322	srl	94	82.805	ENSCAFG00020025024	SRL	54	82.805	Canis_lupus_dingo
ENSMAMG00000023322	srl	99	80.171	ENSCHIG00000017927	SRL	55	83.900	Capra_hircus
ENSMAMG00000023322	srl	99	79.449	ENSTSYG00000007919	SRL	99	83.953	Carlito_syrichta
ENSMAMG00000023322	srl	94	83.710	ENSCPOG00000012643	SRL	99	79.787	Cavia_porcellus
ENSMAMG00000023322	srl	94	77.602	ENSCCAG00000032646	SRL	100	84.433	Cebus_capucinus
ENSMAMG00000023322	srl	94	83.484	ENSCATG00000032227	-	93	83.484	Cercocebus_atys
ENSMAMG00000023322	srl	94	83.937	ENSCLAG00000016242	SRL	99	80.000	Chinchilla_lanigera
ENSMAMG00000023322	srl	82	86.234	ENSCHOG00000001618	SRL	52	86.234	Choloepus_hoffmanni
ENSMAMG00000023322	srl	97	86.788	ENSCPBG00000026371	SRL	98	79.368	Chrysemys_picta_bellii
ENSMAMG00000023322	srl	88	61.151	ENSCING00000005231	-	93	61.151	Ciona_intestinalis
ENSMAMG00000023322	srl	94	83.484	ENSCANG00000035872	SRL	99	83.721	Colobus_angolensis_palliatus
ENSMAMG00000023322	srl	94	84.163	ENSCGRG00001016630	Srl	99	80.213	Cricetulus_griseus_chok1gshd
ENSMAMG00000023322	srl	94	84.163	ENSCGRG00000005458	Srl	99	80.213	Cricetulus_griseus_crigri
ENSMAMG00000023322	srl	96	74.558	ENSCSEG00000011866	SRL	89	75.676	Cynoglossus_semilaevis
ENSMAMG00000023322	srl	99	93.148	ENSCSEG00000016151	srl	99	92.719	Cynoglossus_semilaevis
ENSMAMG00000023322	srl	96	76.087	ENSCVAG00000022465	SRL	60	76.652	Cyprinodon_variegatus
ENSMAMG00000023322	srl	96	94.667	ENSCVAG00000003513	srl	99	92.408	Cyprinodon_variegatus
ENSMAMG00000023322	srl	99	90.426	ENSDARG00000104587	srl	99	90.426	Danio_rerio
ENSMAMG00000023322	srl	80	78.125	ENSDARG00000112959	CABZ01072309.1	100	78.125	Danio_rerio
ENSMAMG00000023322	srl	94	83.710	ENSDNOG00000011643	SRL	53	83.710	Dasypus_novemcinctus
ENSMAMG00000023322	srl	94	83.937	ENSDORG00000014807	Srl	99	80.000	Dipodomys_ordii
ENSMAMG00000023322	srl	79	65.775	ENSEBUG00000015937	srl	94	65.775	Eptatretus_burgeri
ENSMAMG00000023322	srl	94	83.900	ENSEASG00005000942	SRL	53	83.900	Equus_asinus_asinus
ENSMAMG00000023322	srl	99	80.171	ENSECAG00000024219	SRL	93	83.900	Equus_caballus
ENSMAMG00000023322	srl	99	83.918	ENSELUG00000015616	srl	94	86.900	Esox_lucius
ENSMAMG00000023322	srl	94	82.579	ENSFCAG00000022075	SRL	93	82.579	Felis_catus
ENSMAMG00000023322	srl	93	83.409	ENSFALG00000004328	SRL	63	83.409	Ficedula_albicollis
ENSMAMG00000023322	srl	94	84.163	ENSFDAG00000006199	SRL	99	80.810	Fukomys_damarensis
ENSMAMG00000023322	srl	96	94.690	ENSFHEG00000011239	srl	96	95.270	Fundulus_heteroclitus
ENSMAMG00000023322	srl	94	76.577	ENSFHEG00000011854	SRL	99	76.802	Fundulus_heteroclitus
ENSMAMG00000023322	srl	94	89.868	ENSGMOG00000014954	srl	100	89.868	Gadus_morhua
ENSMAMG00000023322	srl	98	80.778	ENSGALG00000038884	SRL	98	80.778	Gallus_gallus
ENSMAMG00000023322	srl	99	92.128	ENSGAFG00000000010	srl	99	92.077	Gambusia_affinis
ENSMAMG00000023322	srl	95	77.283	ENSGAFG00000016984	SRL	99	77.928	Gambusia_affinis
ENSMAMG00000023322	srl	94	94.725	ENSGACG00000011332	srl	100	94.725	Gasterosteus_aculeatus
ENSMAMG00000023322	srl	94	83.484	ENSGGOG00000011312	-	93	83.484	Gorilla_gorilla
ENSMAMG00000023322	srl	96	73.978	ENSHBUG00000015710	SRL	57	75.000	Haplochromis_burtoni
ENSMAMG00000023322	srl	99	94.218	ENSHBUG00000007581	srl	97	97.072	Haplochromis_burtoni
ENSMAMG00000023322	srl	94	83.937	ENSHGLG00000015271	SRL	99	80.000	Heterocephalus_glaber_female
ENSMAMG00000023322	srl	94	83.937	ENSHGLG00100019378	SRL	99	80.000	Heterocephalus_glaber_male
ENSMAMG00000023322	srl	94	75.165	ENSHCOG00000001012	SRL	50	75.165	Hippocampus_comes
ENSMAMG00000023322	srl	99	93.590	ENSHCOG00000008687	srl	99	96.205	Hippocampus_comes
ENSMAMG00000023322	srl	99	89.979	ENSIPUG00000012513	srl	99	89.979	Ictalurus_punctatus
ENSMAMG00000023322	srl	93	69.954	ENSIPUG00000011609	SRL	95	69.954	Ictalurus_punctatus
ENSMAMG00000023322	srl	94	83.710	ENSSTOG00000021151	-	99	79.787	Ictidomys_tridecemlineatus
ENSMAMG00000023322	srl	99	80.556	ENSJJAG00000016400	Srl	94	84.389	Jaculus_jaculus
ENSMAMG00000023322	srl	94	77.551	ENSKMAG00000019537	SRL	100	77.551	Kryptolebias_marmoratus
ENSMAMG00000023322	srl	97	92.341	ENSKMAG00000014115	srl	93	96.200	Kryptolebias_marmoratus
ENSMAMG00000023322	srl	99	93.148	ENSLBEG00000026643	srl	99	93.148	Labrus_bergylta
ENSMAMG00000023322	srl	94	75.792	ENSLBEG00000013811	SRL	95	76.018	Labrus_bergylta
ENSMAMG00000023322	srl	94	85.520	ENSLACG00000002825	SRL	98	85.520	Latimeria_chalumnae
ENSMAMG00000023322	srl	100	86.624	ENSLOCG00000002644	srl	94	90.745	Lepisosteus_oculatus
ENSMAMG00000023322	srl	94	82.805	ENSLAFG00000006329	SRL	50	82.805	Loxodonta_africana
ENSMAMG00000023322	srl	91	83.721	ENSMFAG00000037383	SRL	99	83.721	Macaca_fascicularis
ENSMAMG00000023322	srl	99	80.472	ENSMNEG00000019236	-	93	83.484	Macaca_nemestrina
ENSMAMG00000023322	srl	94	76.244	ENSMLEG00000032156	SRL	93	76.244	Mandrillus_leucophaeus
ENSMAMG00000023322	srl	96	73.763	ENSMZEG00005004010	SRL	57	74.781	Maylandia_zebra
ENSMAMG00000023322	srl	99	94.218	ENSMZEG00005004548	srl	97	97.072	Maylandia_zebra
ENSMAMG00000023322	srl	93	84.091	ENSMGAG00000009342	SRL	92	87.123	Meleagris_gallopavo
ENSMAMG00000023322	srl	94	83.521	ENSMICG00000032307	SRL	94	83.521	Microcebus_murinus
ENSMAMG00000023322	srl	99	79.574	ENSMOCG00000008208	Srl	99	79.574	Microtus_ochrogaster
ENSMAMG00000023322	srl	94	74.505	ENSMMOG00000021572	SRL	99	74.505	Mola_mola
ENSMAMG00000023322	srl	96	96.444	ENSMMOG00000013970	srl	100	96.444	Mola_mola
ENSMAMG00000023322	srl	96	82.927	ENSMODG00000016380	-	50	84.127	Monodelphis_domestica
ENSMAMG00000023322	srl	96	96.239	ENSMALG00000005039	srl	99	96.429	Monopterus_albus
ENSMAMG00000023322	srl	89	77.088	ENSMALG00000000670	SRL	98	77.088	Monopterus_albus
ENSMAMG00000023322	srl	94	84.842	MGP_CAROLIEiJ_G0020400	Srl	99	80.851	Mus_caroli
ENSMAMG00000023322	srl	94	84.842	ENSMUSG00000022519	Srl	99	80.851	Mus_musculus
ENSMAMG00000023322	srl	94	84.842	MGP_SPRETEiJ_G0021294	Srl	99	80.851	Mus_spretus
ENSMAMG00000023322	srl	94	82.805	ENSMPUG00000015025	SRL	54	82.805	Mustela_putorius_furo
ENSMAMG00000023322	srl	100	79.830	ENSMLUG00000030733	SRL	56	83.710	Myotis_lucifugus
ENSMAMG00000023322	srl	94	84.615	ENSNGAG00000019741	Srl	99	80.638	Nannospalax_galili
ENSMAMG00000023322	srl	99	93.790	ENSNBRG00000023775	srl	99	93.790	Neolamprologus_brichardi
ENSMAMG00000023322	srl	96	73.763	ENSNBRG00000002422	SRL	56	76.157	Neolamprologus_brichardi
ENSMAMG00000023322	srl	94	77.602	ENSNLEG00000029051	SRL	93	77.602	Nomascus_leucogenys
ENSMAMG00000023322	srl	97	75.163	ENSOPRG00000000477	-	52	77.149	Ochotona_princeps
ENSMAMG00000023322	srl	94	84.389	ENSODEG00000013256	SRL	99	80.426	Octodon_degus
ENSMAMG00000023322	srl	96	96.896	ENSONIG00000005192	srl	96	96.896	Oreochromis_niloticus
ENSMAMG00000023322	srl	96	95.575	ENSORLG00000008291	srl	92	96.392	Oryzias_latipes
ENSMAMG00000023322	srl	94	75.000	ENSORLG00000015064	SRL	97	75.000	Oryzias_latipes
ENSMAMG00000023322	srl	96	96.018	ENSORLG00020019784	srl	80	96.622	Oryzias_latipes_hni
ENSMAMG00000023322	srl	94	75.225	ENSORLG00020018173	SRL	97	75.225	Oryzias_latipes_hni
ENSMAMG00000023322	srl	96	95.575	ENSORLG00015009342	srl	91	96.171	Oryzias_latipes_hsok
ENSMAMG00000023322	srl	94	75.225	ENSORLG00015019063	SRL	97	75.225	Oryzias_latipes_hsok
ENSMAMG00000023322	srl	94	73.904	ENSOMEG00000005682	SRL	53	74.179	Oryzias_melastigma
ENSMAMG00000023322	srl	96	95.354	ENSOMEG00000010006	srl	98	95.909	Oryzias_melastigma
ENSMAMG00000023322	srl	94	82.883	ENSOGAG00000029266	SRL	54	82.883	Otolemur_garnettii
ENSMAMG00000023322	srl	99	80.728	ENSOARG00000003074	SRL	55	83.900	Ovis_aries
ENSMAMG00000023322	srl	94	83.484	ENSPPAG00000024919	-	99	83.721	Pan_paniscus
ENSMAMG00000023322	srl	94	82.579	ENSPPRG00000010274	SRL	99	83.023	Panthera_pardus
ENSMAMG00000023322	srl	94	82.579	ENSPTIG00000015162	SRL	99	83.023	Panthera_tigris_altaica
ENSMAMG00000023322	srl	94	83.484	ENSPTRG00000007712	SRL	99	83.721	Pan_troglodytes
ENSMAMG00000023322	srl	99	80.687	ENSPANG00000013804	SRL	95	83.484	Papio_anubis
ENSMAMG00000023322	srl	99	77.778	ENSPKIG00000024974	SRL	93	77.778	Paramormyrops_kingsleyae
ENSMAMG00000023322	srl	99	89.574	ENSPKIG00000006405	srl	94	93.018	Paramormyrops_kingsleyae
ENSMAMG00000023322	srl	94	84.199	ENSPSIG00000008586	SRL	50	84.199	Pelodiscus_sinensis
ENSMAMG00000023322	srl	97	93.435	ENSPMGG00000021081	srl	95	95.475	Periophthalmus_magnuspinnatus
ENSMAMG00000023322	srl	94	75.169	ENSPMGG00000023505	-	100	75.169	Periophthalmus_magnuspinnatus
ENSMAMG00000023322	srl	94	83.710	ENSPEMG00000015842	Srl	99	79.787	Peromyscus_maniculatus_bairdii
ENSMAMG00000023322	srl	89	68.578	ENSPMAG00000004786	srl	99	68.578	Petromyzon_marinus
ENSMAMG00000023322	srl	97	81.699	ENSPCIG00000012128	SRL	96	83.673	Phascolarctos_cinereus
ENSMAMG00000023322	srl	99	90.397	ENSPFOG00000011408	srl	98	90.397	Poecilia_formosa
ENSMAMG00000023322	srl	95	75.947	ENSPLAG00000002932	SRL	99	76.577	Poecilia_latipinna
ENSMAMG00000023322	srl	99	92.340	ENSPLAG00000008017	srl	99	91.489	Poecilia_latipinna
ENSMAMG00000023322	srl	99	92.340	ENSPMEG00000006745	srl	99	91.489	Poecilia_mexicana
ENSMAMG00000023322	srl	96	74.514	ENSPMEG00000005890	SRL	60	74.617	Poecilia_mexicana
ENSMAMG00000023322	srl	96	95.556	ENSPREG00000007751	srl	98	95.946	Poecilia_reticulata
ENSMAMG00000023322	srl	95	77.060	ENSPREG00000000315	SRL	99	77.477	Poecilia_reticulata
ENSMAMG00000023322	srl	89	85.203	ENSPPYG00000007053	SRL	98	85.203	Pongo_abelii
ENSMAMG00000023322	srl	94	83.900	ENSPCAG00000003378	-	50	83.900	Procavia_capensis
ENSMAMG00000023322	srl	94	83.973	ENSPCOG00000023135	SRL	99	84.651	Propithecus_coquereli
ENSMAMG00000023322	srl	96	82.119	ENSPVAG00000006586	SRL	54	83.484	Pteropus_vampyrus
ENSMAMG00000023322	srl	96	73.763	ENSPNYG00000003423	SRL	57	74.781	Pundamilia_nyererei
ENSMAMG00000023322	srl	99	94.004	ENSPNYG00000001200	srl	97	96.847	Pundamilia_nyererei
ENSMAMG00000023322	srl	99	90.598	ENSPNAG00000023106	srl	99	90.598	Pygocentrus_nattereri
ENSMAMG00000023322	srl	94	76.190	ENSPNAG00000007361	-	91	76.190	Pygocentrus_nattereri
ENSMAMG00000023322	srl	94	83.258	ENSSBOG00000029273	SRL	93	83.258	Saimiri_boliviensis_boliviensis
ENSMAMG00000023322	srl	94	93.708	ENSSFOG00015009773	srl	95	93.694	Scleropages_formosus
ENSMAMG00000023322	srl	99	93.790	ENSSMAG00000016274	srl	97	96.847	Scophthalmus_maximus
ENSMAMG00000023322	srl	94	75.165	ENSSMAG00000002232	SRL	50	75.165	Scophthalmus_maximus
ENSMAMG00000023322	srl	94	77.111	ENSSDUG00000009161	SRL	99	77.111	Seriola_dumerili
ENSMAMG00000023322	srl	94	97.297	ENSSDUG00000010808	srl	98	97.297	Seriola_dumerili
ENSMAMG00000023322	srl	96	96.460	ENSSLDG00000022024	srl	99	94.004	Seriola_lalandi_dorsalis
ENSMAMG00000023322	srl	94	76.856	ENSSLDG00000014601	SRL	100	77.412	Seriola_lalandi_dorsalis
ENSMAMG00000023322	srl	96	83.186	ENSSPUG00000016859	SRL	98	84.045	Sphenodon_punctatus
ENSMAMG00000023322	srl	99	95.513	ENSSPAG00000019105	srl	99	95.085	Stegastes_partitus
ENSMAMG00000023322	srl	94	78.231	ENSSPAG00000014254	SRL	98	78.231	Stegastes_partitus
ENSMAMG00000023322	srl	96	81.938	ENSSSCG00000007949	SRL	98	83.220	Sus_scrofa
ENSMAMG00000023322	srl	93	83.636	ENSTGUG00000003951	-	97	83.636	Taeniopygia_guttata
ENSMAMG00000023322	srl	77	85.912	ENSTGUG00000016121	-	100	85.912	Taeniopygia_guttata
ENSMAMG00000023322	srl	89	78.282	ENSTRUG00000013310	SRL	55	78.282	Takifugu_rubripes
ENSMAMG00000023322	srl	99	93.576	ENSTRUG00000006005	srl	94	96.396	Takifugu_rubripes
ENSMAMG00000023322	srl	96	96.239	ENSTNIG00000009739	srl	99	94.624	Tetraodon_nigroviridis
ENSMAMG00000023322	srl	94	82.805	ENSUAMG00000005701	SRL	55	82.805	Ursus_americanus
ENSMAMG00000023322	srl	94	82.805	ENSUMAG00000002574	SRL	55	82.805	Ursus_maritimus
ENSMAMG00000023322	srl	100	79.025	ENSXETG00000017313	srl	98	82.167	Xenopus_tropicalis
ENSMAMG00000023322	srl	96	77.111	ENSXCOG00000014584	SRL	98	77.703	Xiphophorus_couchianus
ENSMAMG00000023322	srl	89	95.249	ENSXCOG00000010424	srl	97	95.249	Xiphophorus_couchianus
ENSMAMG00000023322	srl	96	94.912	ENSXMAG00000004625	srl	95	92.077	Xiphophorus_maculatus
ENSMAMG00000023322	srl	96	74.730	ENSXMAG00000027598	SRL	62	75.274	Xiphophorus_maculatus