EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000023432 (Gene tree)
Gene ID: 113130238
Gene Symbol: shq1
Alias: zgc:158255
Full Name: SHQ1%2C H/ACA ribonucleoprotein assembly factor
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 33717 bases
Position: chrOOHQ01000082.1:22912291-22946007
Accession: 113130238
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000034888	SHQ1	PF04925.15	3.5e-67	1	1
ENSMAMP00000034885	SHQ1	PF04925.15	3.6e-67	1	1
ENSMAMP00000034886	SHQ1	PF04925.15	3.6e-67	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000035782	-	2120	-	ENSMAMP00000034885	649 (aa)	-	-
ENSMAMT00000035783	-	4888	-	ENSMAMP00000034886	649 (aa)	-	-
ENSMAMT00000035785	-	4870	-	ENSMAMP00000034888	643 (aa)	XP_026162481	UPI000E461C24

Gene Model

Click here to download ENSMAMG00000023432's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000023432's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000023432	shq1	87	53.093	ENSG00000144736	SHQ1	100	72.000	Homo_sapiens
ENSMAMG00000023432	shq1	96	78.548	ENSAPOG00000000397	shq1	99	78.387	Acanthochromis_polyacanthus
ENSMAMG00000023432	shq1	91	51.913	ENSAMEG00000015140	SHQ1	99	50.582	Ailuropoda_melanoleuca
ENSMAMG00000023432	shq1	96	76.737	ENSACIG00000021249	shq1	99	76.252	Amphilophus_citrinellus
ENSMAMG00000023432	shq1	96	78.526	ENSAOCG00000023311	shq1	99	78.205	Amphiprion_ocellaris
ENSMAMG00000023432	shq1	96	77.689	ENSAPEG00000021686	shq1	99	77.528	Amphiprion_percula
ENSMAMG00000023432	shq1	95	78.479	ENSATEG00000008475	shq1	99	77.994	Anabas_testudineus
ENSMAMG00000023432	shq1	77	56.299	ENSAPLG00000013926	SHQ1	87	58.444	Anas_platyrhynchos
ENSMAMG00000023432	shq1	95	50.000	ENSACAG00000014809	SHQ1	91	50.470	Anolis_carolinensis
ENSMAMG00000023432	shq1	88	39.062	ENSANAG00000030500	-	69	43.108	Aotus_nancymaae
ENSMAMG00000023432	shq1	75	58.045	ENSANAG00000029241	SHQ1	96	50.256	Aotus_nancymaae
ENSMAMG00000023432	shq1	96	74.960	ENSACLG00000023077	shq1	96	75.606	Astatotilapia_calliptera
ENSMAMG00000023432	shq1	74	60.294	ENSAMXG00000043822	shq1	98	52.090	Astyanax_mexicanus
ENSMAMG00000023432	shq1	91	52.073	ENSBTAG00000005436	SHQ1	99	50.984	Bos_taurus
ENSMAMG00000023432	shq1	64	59.574	ENSCJAG00000015131	SHQ1	72	59.952	Callithrix_jacchus
ENSMAMG00000023432	shq1	87	53.887	ENSCAFG00000006434	SHQ1	72	61.631	Canis_familiaris
ENSMAMG00000023432	shq1	87	54.064	ENSCAFG00020016743	SHQ1	72	61.871	Canis_lupus_dingo
ENSMAMG00000023432	shq1	91	52.239	ENSCHIG00000012271	SHQ1	91	52.066	Capra_hircus
ENSMAMG00000023432	shq1	79	48.728	ENSCAPG00000009343	SHQ1	92	59.236	Cavia_aperea
ENSMAMG00000023432	shq1	87	53.439	ENSCPOG00000011443	SHQ1	96	53.322	Cavia_porcellus
ENSMAMG00000023432	shq1	64	52.246	ENSCCAG00000027080	SHQ1	63	70.833	Cebus_capucinus
ENSMAMG00000023432	shq1	74	45.588	ENSCCAG00000036087	-	70	45.946	Cebus_capucinus
ENSMAMG00000023432	shq1	64	61.702	ENSCATG00000041238	SHQ1	97	51.092	Cercocebus_atys
ENSMAMG00000023432	shq1	67	60.998	ENSCLAG00000004206	SHQ1	76	60.998	Chinchilla_lanigera
ENSMAMG00000023432	shq1	50	60.976	ENSCSAG00000011514	SHQ1	66	60.366	Chlorocebus_sabaeus
ENSMAMG00000023432	shq1	95	50.236	ENSCPBG00000006441	SHQ1	100	51.969	Chrysemys_picta_bellii
ENSMAMG00000023432	shq1	61	43.182	ENSCING00000008013	-	97	42.664	Ciona_intestinalis
ENSMAMG00000023432	shq1	61	40.051	ENSCSAVG00000002332	-	98	40.185	Ciona_savignyi
ENSMAMG00000023432	shq1	88	52.759	ENSCANG00000039295	SHQ1	98	51.520	Colobus_angolensis_palliatus
ENSMAMG00000023432	shq1	71	58.672	ENSCGRG00001012583	Shq1	78	60.314	Cricetulus_griseus_chok1gshd
ENSMAMG00000023432	shq1	71	58.672	ENSCGRG00000009849	Shq1	78	60.314	Cricetulus_griseus_crigri
ENSMAMG00000023432	shq1	98	70.126	ENSCSEG00000007829	shq1	99	73.548	Cynoglossus_semilaevis
ENSMAMG00000023432	shq1	95	73.246	ENSCVAG00000020049	shq1	99	71.615	Cyprinodon_variegatus
ENSMAMG00000023432	shq1	67	67.361	ENSDARG00000058522	shq1	97	52.857	Danio_rerio
ENSMAMG00000023432	shq1	87	55.282	ENSDNOG00000033937	SHQ1	96	53.913	Dasypus_novemcinctus
ENSMAMG00000023432	shq1	89	47.368	ENSETEG00000005766	SHQ1	98	46.949	Echinops_telfairi
ENSMAMG00000023432	shq1	59	46.354	ENSEBUG00000005445	shq1	79	48.305	Eptatretus_burgeri
ENSMAMG00000023432	shq1	87	55.166	ENSEASG00005002237	SHQ1	72	62.350	Equus_asinus_asinus
ENSMAMG00000023432	shq1	91	53.589	ENSECAG00000015673	SHQ1	70	62.350	Equus_caballus
ENSMAMG00000023432	shq1	68	61.435	ENSEEUG00000010568	SHQ1	96	52.749	Erinaceus_europaeus
ENSMAMG00000023432	shq1	94	59.571	ENSELUG00000003476	shq1	98	63.072	Esox_lucius
ENSMAMG00000023432	shq1	87	53.065	ENSFCAG00000012781	SHQ1	79	60.480	Felis_catus
ENSMAMG00000023432	shq1	95	52.057	ENSFALG00000013428	SHQ1	100	50.000	Ficedula_albicollis
ENSMAMG00000023432	shq1	65	59.207	ENSFDAG00000005595	SHQ1	65	59.574	Fukomys_damarensis
ENSMAMG00000023432	shq1	95	71.799	ENSFHEG00000017552	shq1	100	71.078	Fundulus_heteroclitus
ENSMAMG00000023432	shq1	61	75.641	ENSGMOG00000007350	shq1	100	75.641	Gadus_morhua
ENSMAMG00000023432	shq1	95	52.133	ENSGALG00000007798	SHQ1	100	51.322	Gallus_gallus
ENSMAMG00000023432	shq1	61	80.769	ENSGACG00000011797	shq1	100	81.026	Gasterosteus_aculeatus
ENSMAMG00000023432	shq1	64	60.520	ENSGGOG00000034818	SHQ1	71	60.911	Gorilla_gorilla
ENSMAMG00000023432	shq1	97	74.960	ENSHBUG00000010857	shq1	99	76.144	Haplochromis_burtoni
ENSMAMG00000023432	shq1	88	51.966	ENSHGLG00000003637	SHQ1	89	51.966	Heterocephalus_glaber_female
ENSMAMG00000023432	shq1	88	51.966	ENSHGLG00100011957	SHQ1	89	51.795	Heterocephalus_glaber_male
ENSMAMG00000023432	shq1	96	64.297	ENSHCOG00000010799	shq1	99	64.239	Hippocampus_comes
ENSMAMG00000023432	shq1	68	58.575	ENSSTOG00000010043	SHQ1	97	50.524	Ictidomys_tridecemlineatus
ENSMAMG00000023432	shq1	67	61.905	ENSJJAG00000017611	Shq1	80	60.175	Jaculus_jaculus
ENSMAMG00000023432	shq1	96	72.123	ENSKMAG00000004457	shq1	99	71.567	Kryptolebias_marmoratus
ENSMAMG00000023432	shq1	67	62.980	ENSLACG00000014243	SHQ1	66	63.205	Latimeria_chalumnae
ENSMAMG00000023432	shq1	95	55.850	ENSLOCG00000009970	shq1	99	56.044	Lepisosteus_oculatus
ENSMAMG00000023432	shq1	88	53.002	ENSMFAG00000039148	SHQ1	97	51.351	Macaca_fascicularis
ENSMAMG00000023432	shq1	87	39.469	ENSMFAG00000037396	-	95	37.610	Macaca_fascicularis
ENSMAMG00000023432	shq1	87	39.469	ENSMMUG00000021761	-	95	37.610	Macaca_mulatta
ENSMAMG00000023432	shq1	80	51.215	ENSMMUG00000009571	SHQ1	93	49.449	Macaca_mulatta
ENSMAMG00000023432	shq1	88	53.002	ENSMNEG00000032667	SHQ1	97	51.351	Macaca_nemestrina
ENSMAMG00000023432	shq1	64	61.229	ENSMLEG00000038493	SHQ1	71	61.631	Mandrillus_leucophaeus
ENSMAMG00000023432	shq1	95	75.490	ENSMZEG00005008649	shq1	99	75.980	Maylandia_zebra
ENSMAMG00000023432	shq1	95	50.319	ENSMGAG00000009640	SHQ1	100	47.812	Meleagris_gallopavo
ENSMAMG00000023432	shq1	69	59.341	ENSMAUG00000022030	Shq1	79	59.911	Mesocricetus_auratus
ENSMAMG00000023432	shq1	88	51.186	ENSMICG00000009224	SHQ1	97	50.084	Microcebus_murinus
ENSMAMG00000023432	shq1	68	61.298	ENSMOCG00000017836	Shq1	78	61.298	Microtus_ochrogaster
ENSMAMG00000023432	shq1	95	70.684	ENSMMOG00000010569	shq1	99	70.130	Mola_mola
ENSMAMG00000023432	shq1	74	55.852	ENSMODG00000003926	SHQ1	75	59.569	Monodelphis_domestica
ENSMAMG00000023432	shq1	95	80.098	ENSMALG00000008870	shq1	99	79.772	Monopterus_albus
ENSMAMG00000023432	shq1	68	59.641	MGP_CAROLIEiJ_G0028689	Shq1	78	60.314	Mus_caroli
ENSMAMG00000023432	shq1	68	58.969	ENSMUSG00000035378	Shq1	78	59.641	Mus_musculus
ENSMAMG00000023432	shq1	70	59.649	MGP_PahariEiJ_G0022440	Shq1	80	60.307	Mus_pahari
ENSMAMG00000023432	shq1	74	57.084	MGP_SPRETEiJ_G0029717	Shq1	78	59.865	Mus_spretus
ENSMAMG00000023432	shq1	87	54.196	ENSMPUG00000017006	SHQ1	94	52.604	Mustela_putorius_furo
ENSMAMG00000023432	shq1	80	51.233	ENSMLUG00000013539	SHQ1	76	58.209	Myotis_lucifugus
ENSMAMG00000023432	shq1	74	52.201	ENSNGAG00000023317	Shq1	77	54.005	Nannospalax_galili
ENSMAMG00000023432	shq1	81	73.180	ENSNBRG00000024004	shq1	98	73.755	Neolamprologus_brichardi
ENSMAMG00000023432	shq1	87	52.577	ENSNLEG00000002731	SHQ1	71	61.391	Nomascus_leucogenys
ENSMAMG00000023432	shq1	67	55.556	ENSMEUG00000009350	-	67	55.556	Notamacropus_eugenii
ENSMAMG00000023432	shq1	87	53.097	ENSODEG00000009192	SHQ1	94	58.333	Octodon_degus
ENSMAMG00000023432	shq1	95	75.530	ENSONIG00000020264	shq1	99	76.183	Oreochromis_niloticus
ENSMAMG00000023432	shq1	87	54.087	ENSOCUG00000016695	SHQ1	96	53.472	Oryctolagus_cuniculus
ENSMAMG00000023432	shq1	95	62.500	ENSORLG00000023538	shq1	99	62.662	Oryzias_latipes
ENSMAMG00000023432	shq1	95	63.175	ENSORLG00020003697	shq1	98	62.993	Oryzias_latipes_hni
ENSMAMG00000023432	shq1	96	61.477	ENSORLG00015021040	shq1	99	62.338	Oryzias_latipes_hsok
ENSMAMG00000023432	shq1	89	66.782	ENSOMEG00000001225	shq1	96	67.483	Oryzias_melastigma
ENSMAMG00000023432	shq1	75	58.418	ENSOGAG00000003898	SHQ1	78	61.024	Otolemur_garnettii
ENSMAMG00000023432	shq1	91	51.815	ENSOARG00000009547	SHQ1	99	51.815	Ovis_aries
ENSMAMG00000023432	shq1	86	39.716	ENSPPAG00000043263	-	69	44.363	Pan_paniscus
ENSMAMG00000023432	shq1	87	53.265	ENSPPAG00000027714	SHQ1	71	61.391	Pan_paniscus
ENSMAMG00000023432	shq1	87	53.887	ENSPPRG00000004769	SHQ1	96	53.217	Panthera_pardus
ENSMAMG00000023432	shq1	87	51.515	ENSPTIG00000011478	SHQ1	96	50.877	Panthera_tigris_altaica
ENSMAMG00000023432	shq1	87	53.265	ENSPTRG00000015106	SHQ1	71	61.391	Pan_troglodytes
ENSMAMG00000023432	shq1	86	39.714	ENSPTRG00000048303	-	68	43.627	Pan_troglodytes
ENSMAMG00000023432	shq1	64	61.939	ENSPANG00000002881	SHQ1	71	62.350	Papio_anubis
ENSMAMG00000023432	shq1	66	68.632	ENSPKIG00000021517	shq1	72	68.932	Paramormyrops_kingsleyae
ENSMAMG00000023432	shq1	95	50.791	ENSPSIG00000005536	SHQ1	100	51.501	Pelodiscus_sinensis
ENSMAMG00000023432	shq1	95	60.743	ENSPMGG00000008838	shq1	99	60.743	Periophthalmus_magnuspinnatus
ENSMAMG00000023432	shq1	64	60.993	ENSPEMG00000000251	Shq1	80	60.175	Peromyscus_maniculatus_bairdii
ENSMAMG00000023432	shq1	68	57.047	ENSPMAG00000005372	shq1	94	58.993	Petromyzon_marinus
ENSMAMG00000023432	shq1	87	70.893	ENSPFOG00000003118	shq1	98	69.107	Poecilia_formosa
ENSMAMG00000023432	shq1	73	68.723	ENSPMEG00000011076	shq1	97	66.596	Poecilia_mexicana
ENSMAMG00000023432	shq1	81	67.748	ENSPREG00000000591	shq1	93	67.181	Poecilia_reticulata
ENSMAMG00000023432	shq1	87	52.650	ENSPPYG00000013717	SHQ1	71	61.391	Pongo_abelii
ENSMAMG00000023432	shq1	87	53.427	ENSPCAG00000009035	SHQ1	73	62.350	Procavia_capensis
ENSMAMG00000023432	shq1	64	60.520	ENSPCOG00000008415	SHQ1	71	61.391	Propithecus_coquereli
ENSMAMG00000023432	shq1	87	51.801	ENSPVAG00000017392	SHQ1	96	52.941	Pteropus_vampyrus
ENSMAMG00000023432	shq1	95	75.204	ENSPNYG00000003878	shq1	99	75.856	Pundamilia_nyererei
ENSMAMG00000023432	shq1	94	55.916	ENSPNAG00000026840	shq1	99	57.440	Pygocentrus_nattereri
ENSMAMG00000023432	shq1	68	59.243	ENSRNOG00000005433	Shq1	75	59.519	Rattus_norvegicus
ENSMAMG00000023432	shq1	88	51.215	ENSRBIG00000026280	SHQ1	71	59.413	Rhinopithecus_bieti
ENSMAMG00000023432	shq1	88	52.911	ENSRROG00000034126	SHQ1	72	61.631	Rhinopithecus_roxellana
ENSMAMG00000023432	shq1	64	53.538	ENSSBOG00000021038	SHQ1	76	53.712	Saimiri_boliviensis_boliviensis
ENSMAMG00000023432	shq1	75	56.911	ENSSHAG00000015077	SHQ1	74	61.722	Sarcophilus_harrisii
ENSMAMG00000023432	shq1	95	58.117	ENSSFOG00015016241	shq1	99	58.347	Scleropages_formosus
ENSMAMG00000023432	shq1	96	75.201	ENSSMAG00000016151	shq1	99	75.481	Scophthalmus_maximus
ENSMAMG00000023432	shq1	96	78.526	ENSSDUG00000011986	shq1	99	78.365	Seriola_dumerili
ENSMAMG00000023432	shq1	96	77.368	ENSSLDG00000013908	shq1	99	77.528	Seriola_lalandi_dorsalis
ENSMAMG00000023432	shq1	89	45.034	ENSSARG00000007119	SHQ1	60	57.558	Sorex_araneus
ENSMAMG00000023432	shq1	81	50.000	ENSSPUG00000011526	-	97	48.175	Sphenodon_punctatus
ENSMAMG00000023432	shq1	87	54.145	ENSSSCG00000011518	SHQ1	78	60.394	Sus_scrofa
ENSMAMG00000023432	shq1	64	60.471	ENSTGUG00000009933	SHQ1	76	61.364	Taeniopygia_guttata
ENSMAMG00000023432	shq1	95	64.600	ENSTRUG00000009446	shq1	99	65.147	Takifugu_rubripes
ENSMAMG00000023432	shq1	66	74.126	ENSTNIG00000007354	shq1	99	72.062	Tetraodon_nigroviridis
ENSMAMG00000023432	shq1	68	72.340	ENSTBEG00000011295	SHQ1	52	72.340	Tupaia_belangeri
ENSMAMG00000023432	shq1	87	53.043	ENSTTRG00000005320	SHQ1	97	52.870	Tursiops_truncatus
ENSMAMG00000023432	shq1	87	53.571	ENSUMAG00000024031	SHQ1	71	61.765	Ursus_maritimus
ENSMAMG00000023432	shq1	66	50.889	ENSVPAG00000004880	SHQ1	96	45.756	Vicugna_pacos
ENSMAMG00000023432	shq1	87	53.534	ENSVVUG00000013906	SHQ1	72	61.151	Vulpes_vulpes
ENSMAMG00000023432	shq1	67	61.098	ENSXETG00000032215	shq1	99	49.445	Xenopus_tropicalis