EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000023439 (Gene tree)
Gene ID: 113140979
Gene Symbol: ern1
Alias: sb:eu1005|zgc:109932
Full Name: endoplasmic reticulum to nucleus signaling 1
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 17435 bases
Position: chrOOHQ01000092.1:16482025-16499459
Accession: 113140979
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000034900	Ribonuc_2-5A	PF06479.12	1.7e-40	1	1
ENSMAMP00000034898	Ribonuc_2-5A	PF06479.12	1.8e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000035798	-	3201	-	ENSMAMP00000034900	1066 (aa)	-	-
ENSMAMT00000035796	-	5313	-	ENSMAMP00000034898	1089 (aa)	XP_026180921	UPI000E458B0B

Gene Model

Click here to download ENSMAMG00000023439's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000023439's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000023439	ern1	87	56.746	ENSMAMG00000008619	ern2	97	57.438

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000023439	ern1	98	88.962	ENSAPOG00000009999	ern1	99	87.912	Acanthochromis_polyacanthus
ENSMAMG00000023439	ern1	100	87.843	ENSACIG00000021716	ern1	100	87.843	Amphilophus_citrinellus
ENSMAMG00000023439	ern1	99	88.754	ENSAOCG00000012309	ern1	99	88.472	Amphiprion_ocellaris
ENSMAMG00000023439	ern1	99	88.379	ENSAPEG00000011263	ern1	99	94.168	Amphiprion_percula
ENSMAMG00000023439	ern1	100	89.854	ENSATEG00000024468	ern1	100	89.854	Anabas_testudineus
ENSMAMG00000023439	ern1	100	88.483	ENSACLG00000027919	ern1	100	88.483	Astatotilapia_calliptera
ENSMAMG00000023439	ern1	95	81.551	ENSAMXG00000000944	ern1	99	80.153	Astyanax_mexicanus
ENSMAMG00000023439	ern1	94	88.711	ENSCSEG00000014500	ern1	99	88.390	Cynoglossus_semilaevis
ENSMAMG00000023439	ern1	98	85.893	ENSCVAG00000002988	ern1	99	86.372	Cyprinodon_variegatus
ENSMAMG00000023439	ern1	90	82.627	ENSDARG00000013997	ern1	100	82.834	Danio_rerio
ENSMAMG00000023439	ern1	92	80.517	ENSELUG00000005957	ern1	98	79.864	Esox_lucius
ENSMAMG00000023439	ern1	98	85.701	ENSFHEG00000005578	ern1	99	85.005	Fundulus_heteroclitus
ENSMAMG00000023439	ern1	88	87.021	ENSGMOG00000011232	ern1	100	87.021	Gadus_morhua
ENSMAMG00000023439	ern1	95	86.994	ENSGAFG00000020231	ern1	97	86.898	Gambusia_affinis
ENSMAMG00000023439	ern1	88	92.128	ENSGACG00000011700	ern1	98	91.932	Gasterosteus_aculeatus
ENSMAMG00000023439	ern1	99	88.577	ENSHBUG00000012581	ern1	99	88.577	Haplochromis_burtoni
ENSMAMG00000023439	ern1	98	84.145	ENSHCOG00000016199	ern1	99	83.520	Hippocampus_comes
ENSMAMG00000023439	ern1	97	79.460	ENSIPUG00000011083	ern1	99	78.551	Ictalurus_punctatus
ENSMAMG00000023439	ern1	98	86.015	ENSKMAG00000019499	ern1	98	85.140	Kryptolebias_marmoratus
ENSMAMG00000023439	ern1	99	84.893	ENSLBEG00000025907	ern1	100	84.736	Labrus_bergylta
ENSMAMG00000023439	ern1	100	88.483	ENSMZEG00005003221	ern1	100	88.483	Maylandia_zebra
ENSMAMG00000023439	ern1	89	92.186	ENSMMOG00000007650	ern1	97	91.564	Mola_mola
ENSMAMG00000023439	ern1	99	88.630	ENSMALG00000017775	ern1	98	88.434	Monopterus_albus
ENSMAMG00000023439	ern1	99	88.379	ENSNBRG00000002179	ern1	99	88.379	Neolamprologus_brichardi
ENSMAMG00000023439	ern1	89	92.381	ENSONIG00000017169	ern1	98	92.479	Oreochromis_niloticus
ENSMAMG00000023439	ern1	98	85.538	ENSORLG00000008940	ern1	100	85.130	Oryzias_latipes
ENSMAMG00000023439	ern1	98	85.442	ENSORLG00020018387	ern1	100	85.223	Oryzias_latipes_hni
ENSMAMG00000023439	ern1	98	85.157	ENSORLG00015007946	ern1	100	85.037	Oryzias_latipes_hsok
ENSMAMG00000023439	ern1	98	85.463	ENSOMEG00000011741	ern1	100	85.000	Oryzias_melastigma
ENSMAMG00000023439	ern1	89	83.053	ENSPKIG00000005593	ern1	96	83.053	Paramormyrops_kingsleyae
ENSMAMG00000023439	ern1	94	87.686	ENSPMGG00000020442	ern1	99	86.990	Periophthalmus_magnuspinnatus
ENSMAMG00000023439	ern1	95	87.175	ENSPFOG00000007378	ern1	97	87.078	Poecilia_formosa
ENSMAMG00000023439	ern1	98	86.342	ENSPLAG00000014780	ern1	99	85.421	Poecilia_latipinna
ENSMAMG00000023439	ern1	98	86.507	ENSPMEG00000016324	ern1	99	85.607	Poecilia_mexicana
ENSMAMG00000023439	ern1	98	85.823	ENSPREG00000006286	ern1	99	84.944	Poecilia_reticulata
ENSMAMG00000023439	ern1	100	88.574	ENSPNYG00000017929	ern1	99	91.462	Pundamilia_nyererei
ENSMAMG00000023439	ern1	95	81.594	ENSPNAG00000029447	ern1	99	80.478	Pygocentrus_nattereri
ENSMAMG00000023439	ern1	100	87.339	ENSSMAG00000015042	ern1	100	87.339	Scophthalmus_maximus
ENSMAMG00000023439	ern1	100	91.348	ENSSDUG00000009098	ern1	100	91.348	Seriola_dumerili
ENSMAMG00000023439	ern1	100	90.893	ENSSLDG00000023254	ern1	100	90.893	Seriola_lalandi_dorsalis
ENSMAMG00000023439	ern1	99	88.086	ENSSPAG00000017539	ern1	99	88.086	Stegastes_partitus
ENSMAMG00000023439	ern1	95	86.969	ENSTRUG00000001041	ern1	97	86.969	Takifugu_rubripes
ENSMAMG00000023439	ern1	88	91.800	ENSTNIG00000017990	ern1	98	91.923	Tetraodon_nigroviridis
ENSMAMG00000023439	ern1	93	89.585	ENSXCOG00000010330	ern1	97	89.585	Xiphophorus_couchianus
ENSMAMG00000023439	ern1	98	86.220	ENSXMAG00000001310	ern1	99	85.327	Xiphophorus_maculatus