EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000023477 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 816 bases
Position: chrOOHQ01000082.1:23838361-23839176
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000034967	RRM_1	PF00076.22	4.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000035865	-	282	-	ENSMAMP00000034967	93 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000023477's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000023477's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000023477	-	83	32.292	ENSMAMG00000003753	TRA2B	52	32.292
ENSMAMG00000023477	-	98	74.725	ENSMAMG00000004888	srsf4	53	74.725
ENSMAMG00000023477	-	78	43.421	ENSMAMG00000023637	-	61	43.421
ENSMAMG00000023477	-	66	33.871	ENSMAMG00000011137	RALYL	64	33.871

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000023477	-	89	87.059	ENSG00000124193	SRSF6	63	87.059	Homo_sapiens
ENSMAMG00000023477	-	82	93.421	ENSAPOG00000016635	-	58	84.043	Acanthochromis_polyacanthus
ENSMAMG00000023477	-	90	97.619	ENSACIG00000020091	-	82	97.619	Amphilophus_citrinellus
ENSMAMG00000023477	-	82	93.421	ENSAOCG00000019438	-	72	91.463	Amphiprion_ocellaris
ENSMAMG00000023477	-	89	87.059	ENSANAG00000024080	SRSF6	63	87.059	Aotus_nancymaae
ENSMAMG00000023477	-	90	97.619	ENSACLG00000024373	-	88	97.619	Astatotilapia_calliptera
ENSMAMG00000023477	-	78	94.521	ENSAMXG00000042692	-	59	92.683	Astyanax_mexicanus
ENSMAMG00000023477	-	89	88.235	ENSBTAG00000008527	SRSF6	63	88.235	Bos_taurus
ENSMAMG00000023477	-	89	87.059	ENSCJAG00000048403	SRSF6	63	87.059	Callithrix_jacchus
ENSMAMG00000023477	-	89	88.235	ENSCAFG00000009289	SRSF6	63	88.235	Canis_familiaris
ENSMAMG00000023477	-	89	88.235	ENSCAFG00020013559	SRSF6	63	88.235	Canis_lupus_dingo
ENSMAMG00000023477	-	89	88.235	ENSCHIG00000015890	-	63	88.235	Capra_hircus
ENSMAMG00000023477	-	89	87.059	ENSCPOG00000011761	SRSF6	63	87.059	Cavia_porcellus
ENSMAMG00000023477	-	89	87.059	ENSCCAG00000026018	-	63	87.059	Cebus_capucinus
ENSMAMG00000023477	-	89	87.059	ENSCATG00000030794	SRSF6	63	87.059	Cercocebus_atys
ENSMAMG00000023477	-	89	87.059	ENSCLAG00000010247	SRSF6	63	87.059	Chinchilla_lanigera
ENSMAMG00000023477	-	89	87.059	ENSCGRG00001022339	Srsf6	63	87.059	Cricetulus_griseus_chok1gshd
ENSMAMG00000023477	-	82	93.421	ENSCSEG00000019778	SRSF6	69	84.783	Cynoglossus_semilaevis
ENSMAMG00000023477	-	82	90.789	ENSCVAG00000001863	SRSF6	81	89.024	Cyprinodon_variegatus
ENSMAMG00000023477	-	78	93.151	ENSDARG00000016783	srsf6b	86	91.463	Danio_rerio
ENSMAMG00000023477	-	89	87.059	ENSDORG00000028378	Srsf6	63	87.059	Dipodomys_ordii
ENSMAMG00000023477	-	94	92.308	ENSELUG00000024182	SRSF6	87	92.135	Esox_lucius
ENSMAMG00000023477	-	92	89.655	ENSELUG00000013506	SRSF6	78	89.655	Esox_lucius
ENSMAMG00000023477	-	89	85.882	ENSGALG00000000990	SRSF6	63	85.882	Gallus_gallus
ENSMAMG00000023477	-	82	92.105	ENSGAFG00000019088	-	55	81.250	Gambusia_affinis
ENSMAMG00000023477	-	89	87.059	ENSGGOG00000009808	SRSF6	63	87.059	Gorilla_gorilla
ENSMAMG00000023477	-	89	87.059	ENSHGLG00000007348	SRSF6	63	87.059	Heterocephalus_glaber_female
ENSMAMG00000023477	-	89	87.059	ENSSTOG00000010866	SRSF6	63	87.059	Ictidomys_tridecemlineatus
ENSMAMG00000023477	-	89	87.059	ENSMFAG00000036925	SRSF6	63	87.059	Macaca_fascicularis
ENSMAMG00000023477	-	89	87.059	ENSMMUG00000006742	SRSF6	63	87.059	Macaca_mulatta
ENSMAMG00000023477	-	89	85.882	ENSMNEG00000027392	-	63	85.882	Macaca_nemestrina
ENSMAMG00000023477	-	89	87.059	ENSMAUG00000019086	-	63	87.059	Mesocricetus_auratus
ENSMAMG00000023477	-	89	87.059	ENSMICG00000008537	SRSF6	63	87.059	Microcebus_murinus
ENSMAMG00000023477	-	82	92.105	ENSMMOG00000015241	-	77	90.244	Mola_mola
ENSMAMG00000023477	-	89	87.059	MGP_CAROLIEiJ_G0024606	Srsf6	63	87.059	Mus_caroli
ENSMAMG00000023477	-	89	87.059	ENSMUSG00000016921	Srsf6	63	87.059	Mus_musculus
ENSMAMG00000023477	-	89	87.059	MGP_PahariEiJ_G0026050	Srsf6	63	87.059	Mus_pahari
ENSMAMG00000023477	-	89	87.059	MGP_SPRETEiJ_G0025528	Srsf6	63	87.059	Mus_spretus
ENSMAMG00000023477	-	89	87.059	ENSNGAG00000017560	Srsf6	63	87.059	Nannospalax_galili
ENSMAMG00000023477	-	89	87.059	ENSNLEG00000006524	SRSF6	63	87.059	Nomascus_leucogenys
ENSMAMG00000023477	-	89	87.059	ENSODEG00000016510	-	63	87.059	Octodon_degus
ENSMAMG00000023477	-	82	92.105	ENSORLG00020017506	srsf6a	60	81.633	Oryzias_latipes_hni
ENSMAMG00000023477	-	89	87.059	ENSPTRG00000044686	-	63	87.059	Pan_troglodytes
ENSMAMG00000023477	-	89	87.059	ENSPANG00000035224	SRSF6	63	87.059	Papio_anubis
ENSMAMG00000023477	-	82	93.421	ENSPKIG00000015603	-	66	82.796	Paramormyrops_kingsleyae
ENSMAMG00000023477	-	90	89.286	ENSPKIG00000018463	-	83	89.286	Paramormyrops_kingsleyae
ENSMAMG00000023477	-	96	69.663	ENSPKIG00000015703	-	70	67.416	Paramormyrops_kingsleyae
ENSMAMG00000023477	-	89	87.059	ENSPCIG00000003820	SRSF6	63	87.059	Phascolarctos_cinereus
ENSMAMG00000023477	-	82	92.105	ENSPLAG00000009243	srsf6a	60	81.250	Poecilia_latipinna
ENSMAMG00000023477	-	82	92.105	ENSPREG00000001040	srsf6a	64	81.250	Poecilia_reticulata
ENSMAMG00000023477	-	89	87.059	ENSPCOG00000026364	SRSF6	63	87.059	Propithecus_coquereli
ENSMAMG00000023477	-	89	90.361	ENSPNAG00000023179	-	64	90.361	Pygocentrus_nattereri
ENSMAMG00000023477	-	86	88.750	ENSRBIG00000041414	SRSF6	62	88.750	Rhinopithecus_bieti
ENSMAMG00000023477	-	89	87.059	ENSRROG00000029989	SRSF6	63	87.059	Rhinopithecus_roxellana
ENSMAMG00000023477	-	89	87.059	ENSSBOG00000033708	-	63	87.059	Saimiri_boliviensis_boliviensis
ENSMAMG00000023477	-	82	92.105	ENSSMAG00000014861	-	56	92.105	Scophthalmus_maximus
ENSMAMG00000023477	-	98	97.802	ENSSDUG00000011036	-	99	97.802	Seriola_dumerili
ENSMAMG00000023477	-	98	97.802	ENSSLDG00000014858	-	99	97.802	Seriola_lalandi_dorsalis
ENSMAMG00000023477	-	89	85.882	ENSSPUG00000004967	SRSF6	63	85.882	Sphenodon_punctatus
ENSMAMG00000023477	-	97	95.556	ENSSPAG00000021913	-	94	95.556	Stegastes_partitus
ENSMAMG00000023477	-	82	93.421	ENSTRUG00000021397	-	83	93.421	Takifugu_rubripes
ENSMAMG00000023477	-	89	88.235	ENSUAMG00000003559	SRSF6	63	88.235	Ursus_americanus
ENSMAMG00000023477	-	89	56.471	ENSVVUG00000019276	-	61	56.471	Vulpes_vulpes