EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000023492 (Gene tree)
Gene ID: 113141194
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 287-like
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 3642 bases
Position: chrOOHQ01000092.1:16702915-16706556
Accession: 113141194
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000034988	zf-C2H2	PF00096.26	5.9e-26	1	5
ENSMAMP00000034988	zf-C2H2	PF00096.26	5.9e-26	2	5
ENSMAMP00000034988	zf-C2H2	PF00096.26	5.9e-26	3	5
ENSMAMP00000034988	zf-C2H2	PF00096.26	5.9e-26	4	5
ENSMAMP00000034988	zf-C2H2	PF00096.26	5.9e-26	5	5
ENSMAMP00000034988	zf-met	PF12874.7	3.1e-06	1	2
ENSMAMP00000034988	zf-met	PF12874.7	3.1e-06	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000035887	-	3115	-	ENSMAMP00000034988	405 (aa)	XP_026181247	UPI000E464988

Gene Model

Click here to download ENSMAMG00000023492's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000023492's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000023492	-	64	42.857	ENSMAMG00000017939	-	87	42.857
ENSMAMG00000023492	-	60	37.668	ENSMAMG00000014758	-	91	37.668
ENSMAMG00000023492	-	77	37.126	ENSMAMG00000009817	-	69	39.437
ENSMAMG00000023492	-	98	40.230	ENSMAMG00000014743	-	89	40.230
ENSMAMG00000023492	-	53	38.342	ENSMAMG00000019301	-	94	41.593
ENSMAMG00000023492	-	61	36.364	ENSMAMG00000015632	snai2	72	36.364
ENSMAMG00000023492	-	58	40.854	ENSMAMG00000002731	znf1056	80	40.854
ENSMAMG00000023492	-	59	36.957	ENSMAMG00000006312	-	92	47.778
ENSMAMG00000023492	-	98	39.583	ENSMAMG00000017946	-	89	39.583
ENSMAMG00000023492	-	71	39.205	ENSMAMG00000016119	-	90	39.205
ENSMAMG00000023492	-	68	34.171	ENSMAMG00000002166	zbtb41	60	32.821
ENSMAMG00000023492	-	55	44.554	ENSMAMG00000022502	-	93	44.554
ENSMAMG00000023492	-	55	41.964	ENSMAMG00000009313	znf646	61	41.964
ENSMAMG00000023492	-	58	36.126	ENSMAMG00000015670	-	70	36.126
ENSMAMG00000023492	-	50	34.483	ENSMAMG00000004457	PRDM15	55	34.483
ENSMAMG00000023492	-	54	39.583	ENSMAMG00000010902	-	61	39.583
ENSMAMG00000023492	-	98	44.531	ENSMAMG00000018071	-	92	32.727
ENSMAMG00000023492	-	56	41.860	ENSMAMG00000022147	-	68	41.860
ENSMAMG00000023492	-	56	43.750	ENSMAMG00000016087	-	96	43.750
ENSMAMG00000023492	-	55	32.642	ENSMAMG00000009555	-	52	32.821
ENSMAMG00000023492	-	100	88.889	ENSMAMG00000023490	-	100	88.889
ENSMAMG00000023492	-	98	35.366	ENSMAMG00000022154	-	88	35.366
ENSMAMG00000023492	-	54	36.585	ENSMAMG00000013419	prdm5	71	36.585
ENSMAMG00000023492	-	50	46.154	ENSMAMG00000002083	-	93	37.500
ENSMAMG00000023492	-	98	31.382	ENSMAMG00000022150	-	96	31.382
ENSMAMG00000023492	-	59	37.805	ENSMAMG00000022152	-	63	37.805
ENSMAMG00000023492	-	98	34.434	ENSMAMG00000019385	-	99	34.434
ENSMAMG00000023492	-	98	44.848	ENSMAMG00000018114	-	93	44.848
ENSMAMG00000023492	-	52	43.396	ENSMAMG00000001157	znf236	51	43.396
ENSMAMG00000023492	-	54	38.144	ENSMAMG00000007352	-	96	38.144

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000023492	-	99	40.741	ENSACLG00000026187	-	97	40.741	Astatotilapia_calliptera
ENSMAMG00000023492	-	99	40.741	ENSHBUG00000004077	-	97	43.810	Haplochromis_burtoni
ENSMAMG00000023492	-	58	36.090	ENSLBEG00000024451	-	55	36.090	Labrus_bergylta
ENSMAMG00000023492	-	99	40.741	ENSMZEG00005006457	-	97	40.741	Maylandia_zebra
ENSMAMG00000023492	-	97	40.741	ENSNBRG00000018141	-	96	40.741	Neolamprologus_brichardi
ENSMAMG00000023492	-	99	40.741	ENSPREG00000020857	-	94	40.741	Poecilia_reticulata
ENSMAMG00000023492	-	99	46.699	ENSSDUG00000008329	-	75	71.681	Seriola_dumerili
ENSMAMG00000023492	-	99	40.741	ENSXMAG00000025209	-	94	40.741	Xiphophorus_maculatus