EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000023526 (Gene tree)
Gene ID: 113142191
Gene Symbol: apex1
Alias: hm:zehn1532|wu:fc13d11|zap1|zgc:66204
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 6961 bases
Position: chrOOHQ01000056.1:3976813-3983773
Accession: 113142191
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000035044	Exo_endo_phos	PF03372.23	4.6e-19	1	1
ENSMAMP00000035043	Exo_endo_phos	PF03372.23	6.3e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000035944	-	5511	-	ENSMAMP00000035043	343 (aa)	XP_026182861	UPI000E457E82
ENSMAMT00000035945	-	5405	-	ENSMAMP00000035044	310 (aa)	XP_026182862	UPI000E4579E9

Gene Model

Click here to download ENSMAMG00000023526's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000023526's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000023526	apex1	99	66.456	ENSG00000100823	APEX1	88	71.326	Homo_sapiens
ENSMAMG00000023526	apex1	100	87.419	ENSAPOG00000017002	apex1	100	87.419	Acanthochromis_polyacanthus
ENSMAMG00000023526	apex1	99	66.772	ENSAMEG00000005418	APEX1	88	70.968	Ailuropoda_melanoleuca
ENSMAMG00000023526	apex1	89	92.058	ENSACIG00000010653	apex1	95	92.143	Amphilophus_citrinellus
ENSMAMG00000023526	apex1	100	87.419	ENSAOCG00000009649	apex1	100	87.419	Amphiprion_ocellaris
ENSMAMG00000023526	apex1	100	87.742	ENSAPEG00000021453	apex1	100	87.742	Amphiprion_percula
ENSMAMG00000023526	apex1	99	93.204	ENSATEG00000002883	apex1	97	93.204	Anabas_testudineus
ENSMAMG00000023526	apex1	81	30.921	ENSACAG00000011201	APEX2	59	30.565	Anolis_carolinensis
ENSMAMG00000023526	apex1	99	68.239	ENSACAG00000008099	APEX1	99	68.239	Anolis_carolinensis
ENSMAMG00000023526	apex1	99	67.089	ENSANAG00000030117	APEX1	99	67.089	Aotus_nancymaae
ENSMAMG00000023526	apex1	100	91.290	ENSACLG00000018441	apex1	100	91.290	Astatotilapia_calliptera
ENSMAMG00000023526	apex1	99	86.129	ENSAMXG00000034699	apex1	99	85.806	Astyanax_mexicanus
ENSMAMG00000023526	apex1	99	66.139	ENSBTAG00000002745	APEX1	99	66.139	Bos_taurus
ENSMAMG00000023526	apex1	91	43.007	WBGene00001372	exo-3	92	44.195	Caenorhabditis_elegans
ENSMAMG00000023526	apex1	99	67.089	ENSCJAG00000009726	APEX1	99	67.089	Callithrix_jacchus
ENSMAMG00000023526	apex1	99	67.192	ENSCAFG00000032033	APEX1	99	67.192	Canis_familiaris
ENSMAMG00000023526	apex1	99	67.192	ENSCAFG00020014377	-	99	67.192	Canis_lupus_dingo
ENSMAMG00000023526	apex1	53	61.404	ENSCAFG00020023002	-	94	61.988	Canis_lupus_dingo
ENSMAMG00000023526	apex1	99	66.139	ENSCHIG00000007298	-	99	66.139	Capra_hircus
ENSMAMG00000023526	apex1	87	56.827	ENSCHIG00000014537	-	89	54.317	Capra_hircus
ENSMAMG00000023526	apex1	99	66.246	ENSTSYG00000034813	APEX1	99	65.823	Carlito_syrichta
ENSMAMG00000023526	apex1	93	62.414	ENSCAPG00000016235	APEX1	91	70.763	Cavia_aperea
ENSMAMG00000023526	apex1	99	67.192	ENSCPOG00000030909	APEX1	88	71.326	Cavia_porcellus
ENSMAMG00000023526	apex1	99	67.089	ENSCCAG00000033056	-	99	67.089	Cebus_capucinus
ENSMAMG00000023526	apex1	99	57.911	ENSCCAG00000031931	-	87	61.649	Cebus_capucinus
ENSMAMG00000023526	apex1	99	66.139	ENSCATG00000015580	APEX1	88	70.968	Cercocebus_atys
ENSMAMG00000023526	apex1	99	67.508	ENSCLAG00000001002	APEX1	88	71.685	Chinchilla_lanigera
ENSMAMG00000023526	apex1	99	66.456	ENSCSAG00000016670	-	88	71.326	Chlorocebus_sabaeus
ENSMAMG00000023526	apex1	99	66.456	ENSCSAG00000016685	-	88	71.326	Chlorocebus_sabaeus
ENSMAMG00000023526	apex1	99	70.253	ENSCPBG00000009567	APEX1	99	70.253	Chrysemys_picta_bellii
ENSMAMG00000023526	apex1	98	56.250	ENSCING00000008137	-	85	60.300	Ciona_intestinalis
ENSMAMG00000023526	apex1	99	48.889	ENSCSAVG00000007144	-	100	54.264	Ciona_savignyi
ENSMAMG00000023526	apex1	99	66.772	ENSCANG00000030726	APEX1	99	66.772	Colobus_angolensis_palliatus
ENSMAMG00000023526	apex1	99	66.562	ENSCGRG00001017046	Apex1	88	70.968	Cricetulus_griseus_chok1gshd
ENSMAMG00000023526	apex1	99	66.562	ENSCGRG00000008984	Apex1	88	70.968	Cricetulus_griseus_crigri
ENSMAMG00000023526	apex1	100	88.710	ENSCSEG00000017499	apex1	99	88.710	Cynoglossus_semilaevis
ENSMAMG00000023526	apex1	100	91.290	ENSCVAG00000022075	apex1	100	91.290	Cyprinodon_variegatus
ENSMAMG00000023526	apex1	99	84.142	ENSDARG00000045843	apex1	99	84.142	Danio_rerio
ENSMAMG00000023526	apex1	99	63.722	ENSDNOG00000042234	APEX1	94	63.291	Dasypus_novemcinctus
ENSMAMG00000023526	apex1	99	66.139	ENSDORG00000001616	Apex1	88	70.968	Dipodomys_ordii
ENSMAMG00000023526	apex1	99	67.192	ENSETEG00000004855	-	99	66.877	Echinops_telfairi
ENSMAMG00000023526	apex1	76	60.084	ENSEBUG00000000622	-	92	60.084	Eptatretus_burgeri
ENSMAMG00000023526	apex1	99	67.508	ENSEASG00005017489	APEX1	65	71.685	Equus_asinus_asinus
ENSMAMG00000023526	apex1	99	67.508	ENSECAG00000022325	APEX1	72	71.685	Equus_caballus
ENSMAMG00000023526	apex1	86	70.632	ENSEEUG00000012569	APEX1	93	70.632	Erinaceus_europaeus
ENSMAMG00000023526	apex1	99	81.935	ENSELUG00000021706	apex1	99	83.871	Esox_lucius
ENSMAMG00000023526	apex1	99	67.405	ENSFCAG00000030869	APEX1	88	72.043	Felis_catus
ENSMAMG00000023526	apex1	99	67.823	ENSFDAG00000006120	APEX1	88	72.043	Fukomys_damarensis
ENSMAMG00000023526	apex1	100	90.323	ENSFHEG00000009031	apex1	91	87.834	Fundulus_heteroclitus
ENSMAMG00000023526	apex1	100	75.484	ENSGMOG00000007943	apex1	99	75.484	Gadus_morhua
ENSMAMG00000023526	apex1	100	92.581	ENSGAFG00000005311	apex1	100	92.581	Gambusia_affinis
ENSMAMG00000023526	apex1	100	90.645	ENSGACG00000019497	apex1	99	92.105	Gasterosteus_aculeatus
ENSMAMG00000023526	apex1	99	69.937	ENSGAGG00000014999	APEX1	99	69.937	Gopherus_agassizii
ENSMAMG00000023526	apex1	99	66.139	ENSGGOG00000002128	APEX1	88	70.968	Gorilla_gorilla
ENSMAMG00000023526	apex1	100	90.968	ENSHBUG00000005894	apex1	100	90.968	Haplochromis_burtoni
ENSMAMG00000023526	apex1	99	68.454	ENSHGLG00000002848	APEX1	88	71.685	Heterocephalus_glaber_female
ENSMAMG00000023526	apex1	99	68.454	ENSHGLG00100017878	APEX1	88	71.685	Heterocephalus_glaber_male
ENSMAMG00000023526	apex1	100	86.495	ENSHCOG00000009961	apex1	100	86.174	Hippocampus_comes
ENSMAMG00000023526	apex1	99	83.172	ENSIPUG00000005799	apex1	99	83.172	Ictalurus_punctatus
ENSMAMG00000023526	apex1	99	67.089	ENSSTOG00000010096	APEX1	99	67.089	Ictidomys_tridecemlineatus
ENSMAMG00000023526	apex1	90	63.082	ENSJJAG00000020465	-	90	63.082	Jaculus_jaculus
ENSMAMG00000023526	apex1	99	59.494	ENSJJAG00000003660	-	99	58.544	Jaculus_jaculus
ENSMAMG00000023526	apex1	99	66.139	ENSJJAG00000012067	-	88	70.609	Jaculus_jaculus
ENSMAMG00000023526	apex1	100	90.645	ENSKMAG00000021171	apex1	100	90.645	Kryptolebias_marmoratus
ENSMAMG00000023526	apex1	100	90.323	ENSLBEG00000010248	apex1	100	90.323	Labrus_bergylta
ENSMAMG00000023526	apex1	99	73.248	ENSLACG00000008617	APEX1	89	77.500	Latimeria_chalumnae
ENSMAMG00000023526	apex1	99	79.553	ENSLOCG00000015516	apex1	99	78.594	Lepisosteus_oculatus
ENSMAMG00000023526	apex1	99	67.089	ENSLAFG00000021872	APEX1	99	67.089	Loxodonta_africana
ENSMAMG00000023526	apex1	99	66.139	ENSMFAG00000002565	APEX1	88	70.968	Macaca_fascicularis
ENSMAMG00000023526	apex1	99	66.139	ENSMMUG00000048039	APEX1	88	70.968	Macaca_mulatta
ENSMAMG00000023526	apex1	99	66.246	ENSMNEG00000036944	APEX1	88	70.968	Macaca_nemestrina
ENSMAMG00000023526	apex1	99	66.139	ENSMLEG00000042125	APEX1	88	70.968	Mandrillus_leucophaeus
ENSMAMG00000023526	apex1	100	91.290	ENSMZEG00005014187	apex1	100	91.290	Maylandia_zebra
ENSMAMG00000023526	apex1	99	67.089	ENSMAUG00000013994	Apex1	99	66.139	Mesocricetus_auratus
ENSMAMG00000023526	apex1	99	65.823	ENSMICG00000043554	APEX1	88	70.609	Microcebus_murinus
ENSMAMG00000023526	apex1	99	67.508	ENSMOCG00000013721	Apex1	99	67.302	Microtus_ochrogaster
ENSMAMG00000023526	apex1	100	86.174	ENSMMOG00000010031	apex1	100	85.312	Mola_mola
ENSMAMG00000023526	apex1	90	69.892	ENSMODG00000007125	APEX1	99	64.151	Monodelphis_domestica
ENSMAMG00000023526	apex1	90	85.000	ENSMALG00000011699	apex1	75	85.000	Monopterus_albus
ENSMAMG00000023526	apex1	99	67.197	MGP_CAROLIEiJ_G0019209	Apex1	99	67.197	Mus_caroli
ENSMAMG00000023526	apex1	99	67.302	ENSMUSG00000035960	Apex1	99	67.302	Mus_musculus
ENSMAMG00000023526	apex1	99	67.302	MGP_PahariEiJ_G0030232	Apex1	99	67.302	Mus_pahari
ENSMAMG00000023526	apex1	99	67.302	MGP_SPRETEiJ_G0020101	Apex1	99	67.302	Mus_spretus
ENSMAMG00000023526	apex1	99	66.144	ENSMLUG00000028957	APEX1	87	70.609	Myotis_lucifugus
ENSMAMG00000023526	apex1	99	68.139	ENSNGAG00000002725	-	99	67.508	Nannospalax_galili
ENSMAMG00000023526	apex1	87	56.115	ENSNGAG00000021748	-	85	54.152	Nannospalax_galili
ENSMAMG00000023526	apex1	100	91.290	ENSNBRG00000005334	apex1	100	88.201	Neolamprologus_brichardi
ENSMAMG00000023526	apex1	99	66.139	ENSNLEG00000010839	APEX1	89	70.968	Nomascus_leucogenys
ENSMAMG00000023526	apex1	99	66.134	ENSMEUG00000014519	APEX1	99	66.134	Notamacropus_eugenii
ENSMAMG00000023526	apex1	99	67.089	ENSOPRG00000014029	APEX1	99	66.772	Ochotona_princeps
ENSMAMG00000023526	apex1	99	67.508	ENSODEG00000001703	-	88	71.685	Octodon_degus
ENSMAMG00000023526	apex1	95	52.721	ENSODEG00000004777	-	83	57.937	Octodon_degus
ENSMAMG00000023526	apex1	99	52.484	ENSODEG00000006583	-	87	54.386	Octodon_degus
ENSMAMG00000023526	apex1	100	91.290	ENSONIG00000012089	apex1	100	91.290	Oreochromis_niloticus
ENSMAMG00000023526	apex1	88	70.545	ENSOANG00000008836	APEX1	83	64.583	Ornithorhynchus_anatinus
ENSMAMG00000023526	apex1	99	67.089	ENSOCUG00000005022	APEX1	99	67.089	Oryctolagus_cuniculus
ENSMAMG00000023526	apex1	100	92.283	ENSORLG00000012378	apex1	100	92.283	Oryzias_latipes
ENSMAMG00000023526	apex1	100	92.283	ENSORLG00020021371	apex1	100	92.283	Oryzias_latipes_hni
ENSMAMG00000023526	apex1	100	92.283	ENSORLG00015020089	apex1	100	92.283	Oryzias_latipes_hsok
ENSMAMG00000023526	apex1	100	91.640	ENSOMEG00000018876	apex1	100	91.640	Oryzias_melastigma
ENSMAMG00000023526	apex1	99	67.823	ENSOGAG00000013335	-	88	72.401	Otolemur_garnettii
ENSMAMG00000023526	apex1	90	64.158	ENSOGAG00000029355	-	89	64.158	Otolemur_garnettii
ENSMAMG00000023526	apex1	96	63.072	ENSOARG00000001876	-	99	63.072	Ovis_aries
ENSMAMG00000023526	apex1	99	66.139	ENSOARG00000019740	-	99	66.139	Ovis_aries
ENSMAMG00000023526	apex1	96	57.285	ENSOARG00000014424	-	89	58.781	Ovis_aries
ENSMAMG00000023526	apex1	99	66.456	ENSPPAG00000038760	APEX1	99	63.975	Pan_paniscus
ENSMAMG00000023526	apex1	99	67.405	ENSPPRG00000011794	APEX1	99	67.405	Panthera_pardus
ENSMAMG00000023526	apex1	99	67.405	ENSPTIG00000014829	APEX1	88	72.043	Panthera_tigris_altaica
ENSMAMG00000023526	apex1	99	66.456	ENSPTRG00000006093	APEX1	99	63.975	Pan_troglodytes
ENSMAMG00000023526	apex1	99	66.139	ENSPANG00000022757	APEX1	88	70.968	Papio_anubis
ENSMAMG00000023526	apex1	89	85.507	ENSPKIG00000003504	apex1	99	83.654	Paramormyrops_kingsleyae
ENSMAMG00000023526	apex1	86	76.580	ENSPMGG00000016596	apex1	79	76.580	Periophthalmus_magnuspinnatus
ENSMAMG00000023526	apex1	99	66.984	ENSPEMG00000019097	Apex1	99	66.984	Peromyscus_maniculatus_bairdii
ENSMAMG00000023526	apex1	93	71.134	ENSPMAG00000007275	-	95	72.401	Petromyzon_marinus
ENSMAMG00000023526	apex1	90	69.534	ENSPCIG00000023274	APEX1	87	69.534	Phascolarctos_cinereus
ENSMAMG00000023526	apex1	100	92.258	ENSPFOG00000004178	apex1	100	92.258	Poecilia_formosa
ENSMAMG00000023526	apex1	100	92.581	ENSPLAG00000012779	apex1	100	92.581	Poecilia_latipinna
ENSMAMG00000023526	apex1	100	92.258	ENSPMEG00000019623	apex1	100	92.258	Poecilia_mexicana
ENSMAMG00000023526	apex1	100	91.613	ENSPREG00000014298	apex1	100	91.318	Poecilia_reticulata
ENSMAMG00000023526	apex1	99	66.772	ENSPPYG00000005565	APEX1	88	71.326	Pongo_abelii
ENSMAMG00000023526	apex1	99	64.873	ENSPCAG00000010376	APEX1	99	64.873	Procavia_capensis
ENSMAMG00000023526	apex1	99	66.139	ENSPCOG00000021564	APEX1	88	70.968	Propithecus_coquereli
ENSMAMG00000023526	apex1	99	66.144	ENSPVAG00000010736	APEX1	87	70.968	Pteropus_vampyrus
ENSMAMG00000023526	apex1	100	91.613	ENSPNYG00000023940	apex1	100	91.613	Pundamilia_nyererei
ENSMAMG00000023526	apex1	92	85.664	ENSPNAG00000020897	apex1	93	86.957	Pygocentrus_nattereri
ENSMAMG00000023526	apex1	99	66.667	ENSRNOG00000009663	Apex1	99	66.667	Rattus_norvegicus
ENSMAMG00000023526	apex1	99	66.456	ENSRBIG00000038325	APEX1	87	71.326	Rhinopithecus_bieti
ENSMAMG00000023526	apex1	99	67.089	ENSSBOG00000018921	-	99	67.089	Saimiri_boliviensis_boliviensis
ENSMAMG00000023526	apex1	99	60.000	ENSSBOG00000031372	-	91	62.366	Saimiri_boliviensis_boliviensis
ENSMAMG00000023526	apex1	100	64.013	ENSSHAG00000013524	APEX1	97	64.127	Sarcophilus_harrisii
ENSMAMG00000023526	apex1	99	79.355	ENSSFOG00015001948	apex1	99	81.935	Scleropages_formosus
ENSMAMG00000023526	apex1	100	88.254	ENSSMAG00000013348	apex1	100	88.889	Scophthalmus_maximus
ENSMAMG00000023526	apex1	100	92.581	ENSSDUG00000016377	apex1	100	92.605	Seriola_dumerili
ENSMAMG00000023526	apex1	100	92.258	ENSSLDG00000023005	apex1	100	92.258	Seriola_lalandi_dorsalis
ENSMAMG00000023526	apex1	90	72.500	ENSSPUG00000000531	APEX1	94	72.401	Sphenodon_punctatus
ENSMAMG00000023526	apex1	100	87.419	ENSSPAG00000000458	apex1	100	87.419	Stegastes_partitus
ENSMAMG00000023526	apex1	99	66.456	ENSSSCG00000040060	-	93	66.139	Sus_scrofa
ENSMAMG00000023526	apex1	95	39.604	ENSSSCG00000039705	-	89	41.877	Sus_scrofa
ENSMAMG00000023526	apex1	76	57.872	ENSTGUG00000014378	APEX1	100	57.872	Taeniopygia_guttata
ENSMAMG00000023526	apex1	100	84.026	ENSTRUG00000004268	apex1	100	84.242	Takifugu_rubripes
ENSMAMG00000023526	apex1	100	85.484	ENSTNIG00000005778	apex1	100	85.484	Tetraodon_nigroviridis
ENSMAMG00000023526	apex1	99	63.924	ENSTBEG00000006405	APEX1	99	63.924	Tupaia_belangeri
ENSMAMG00000023526	apex1	76	69.787	ENSTTRG00000007860	APEX1	100	69.787	Tursiops_truncatus
ENSMAMG00000023526	apex1	99	66.456	ENSUAMG00000010457	APEX1	88	70.968	Ursus_americanus
ENSMAMG00000023526	apex1	99	66.456	ENSUMAG00000009178	APEX1	88	70.968	Ursus_maritimus
ENSMAMG00000023526	apex1	76	65.957	ENSVPAG00000005083	APEX1	100	65.957	Vicugna_pacos
ENSMAMG00000023526	apex1	99	66.877	ENSVVUG00000009010	APEX1	99	67.192	Vulpes_vulpes
ENSMAMG00000023526	apex1	99	69.108	ENSXETG00000024773	apex1	99	68.790	Xenopus_tropicalis
ENSMAMG00000023526	apex1	100	92.581	ENSXCOG00000015233	apex1	100	92.283	Xiphophorus_couchianus
ENSMAMG00000023526	apex1	100	92.581	ENSXMAG00000006195	apex1	100	92.581	Xiphophorus_maculatus