EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000023613 (Gene tree)
Gene ID: 113140470
Gene Symbol: tnrc6c1
Alias: fj17e06|si:dkey-54k13.1|unm_sa1472|wu:fj17e06
Full Name: trinucleotide repeat-containing gene 6C protein-like
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 33128 bases
Position: chrOOHQ01000092.1:17349060-17382187
Accession: 113140470
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000035182	Ago_hook	PF10427.9	2.5e-08	1	1
ENSMAMP00000035176	Ago_hook	PF10427.9	3.8e-07	1	1
ENSMAMP00000035178	Ago_hook	PF10427.9	4.6e-07	1	1
ENSMAMP00000035182	RRM_1	PF00076.22	0.00016	1	1
ENSMAMP00000035178	RRM_1	PF00076.22	0.0002	1	1
ENSMAMP00000035176	RRM_1	PF00076.22	0.00023	1	1
ENSMAMP00000035175	RRM_1	PF00076.22	0.00024	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000036088	-	4728	-	ENSMAMP00000035182	1575 (aa)	-	-
ENSMAMT00000036081	-	6417	-	ENSMAMP00000035175	1946 (aa)	-	-
ENSMAMT00000036082	-	6306	-	ENSMAMP00000035176	1909 (aa)	XP_026180062	UPI000E460DE3
ENSMAMT00000036084	-	5504	-	ENSMAMP00000035178	1693 (aa)	XP_026180063	UPI000E4602D9

Gene Model

Click here to download ENSMAMG00000023613's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000023613's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000023613	tnrc6c1	100	55.797	ENSMAMG00000001718	tnrc6c2	100	56.977

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000023613	tnrc6c1	100	51.397	ENSG00000078687	TNRC6C	100	56.034	Homo_sapiens
ENSMAMG00000023613	tnrc6c1	100	87.368	ENSAPOG00000019749	tnrc6c1	100	88.190	Acanthochromis_polyacanthus
ENSMAMG00000023613	tnrc6c1	97	49.914	ENSAMEG00000013756	TNRC6C	90	52.417	Ailuropoda_melanoleuca
ENSMAMG00000023613	tnrc6c1	100	73.303	ENSACIG00000008075	tnrc6c1	99	75.227	Amphilophus_citrinellus
ENSMAMG00000023613	tnrc6c1	100	88.249	ENSAOCG00000023968	tnrc6c1	100	89.130	Amphiprion_ocellaris
ENSMAMG00000023613	tnrc6c1	100	88.367	ENSAPEG00000009020	tnrc6c1	100	89.248	Amphiprion_percula
ENSMAMG00000023613	tnrc6c1	100	51.077	ENSAPLG00000005456	TNRC6C	85	53.920	Anas_platyrhynchos
ENSMAMG00000023613	tnrc6c1	97	52.826	ENSACAG00000016198	TNRC6C	91	54.700	Anolis_carolinensis
ENSMAMG00000023613	tnrc6c1	100	50.833	ENSANAG00000021554	TNRC6C	95	52.997	Aotus_nancymaae
ENSMAMG00000023613	tnrc6c1	100	73.430	ENSACLG00000000424	tnrc6c1	99	74.733	Astatotilapia_calliptera
ENSMAMG00000023613	tnrc6c1	97	50.661	ENSBTAG00000018658	TNRC6C	88	54.621	Bos_taurus
ENSMAMG00000023613	tnrc6c1	100	50.831	ENSCJAG00000019431	TNRC6C	94	52.941	Callithrix_jacchus
ENSMAMG00000023613	tnrc6c1	97	51.294	ENSCAFG00000005224	TNRC6C	95	53.433	Canis_familiaris
ENSMAMG00000023613	tnrc6c1	97	51.116	ENSCAFG00020006661	TNRC6C	94	52.122	Canis_lupus_dingo
ENSMAMG00000023613	tnrc6c1	93	61.094	ENSCHIG00000026004	TNRC6C	80	55.943	Capra_hircus
ENSMAMG00000023613	tnrc6c1	97	52.079	ENSTSYG00000005403	TNRC6C	88	55.045	Carlito_syrichta
ENSMAMG00000023613	tnrc6c1	100	46.607	ENSCAPG00000007307	TNRC6C	95	48.125	Cavia_aperea
ENSMAMG00000023613	tnrc6c1	100	49.720	ENSCPOG00000000467	TNRC6C	95	52.595	Cavia_porcellus
ENSMAMG00000023613	tnrc6c1	100	52.120	ENSCCAG00000030524	TNRC6C	94	54.740	Cebus_capucinus
ENSMAMG00000023613	tnrc6c1	100	51.314	ENSCATG00000033135	TNRC6C	94	55.108	Cercocebus_atys
ENSMAMG00000023613	tnrc6c1	100	50.559	ENSCLAG00000011139	TNRC6C	95	53.118	Chinchilla_lanigera
ENSMAMG00000023613	tnrc6c1	100	51.258	ENSCSAG00000005167	TNRC6C	95	53.909	Chlorocebus_sabaeus
ENSMAMG00000023613	tnrc6c1	64	63.636	ENSCHOG00000000088	TNRC6C	51	63.636	Choloepus_hoffmanni
ENSMAMG00000023613	tnrc6c1	100	53.109	ENSCPBG00000027960	TNRC6C	94	57.285	Chrysemys_picta_bellii
ENSMAMG00000023613	tnrc6c1	100	51.481	ENSCANG00000041771	TNRC6C	94	54.704	Colobus_angolensis_palliatus
ENSMAMG00000023613	tnrc6c1	99	48.428	ENSCGRG00001022686	Tnrc6c	95	52.573	Cricetulus_griseus_chok1gshd
ENSMAMG00000023613	tnrc6c1	99	48.710	ENSCGRG00000018041	Tnrc6c	95	52.573	Cricetulus_griseus_crigri
ENSMAMG00000023613	tnrc6c1	99	80.118	ENSCSEG00000012744	tnrc6c1	100	78.674	Cynoglossus_semilaevis
ENSMAMG00000023613	tnrc6c1	93	73.750	ENSDARG00000076847	tnrc6c1	96	73.576	Danio_rerio
ENSMAMG00000023613	tnrc6c1	97	52.289	ENSDNOG00000003247	TNRC6C	95	54.787	Dasypus_novemcinctus
ENSMAMG00000023613	tnrc6c1	97	47.938	ENSDORG00000004558	Tnrc6c	80	50.451	Dipodomys_ordii
ENSMAMG00000023613	tnrc6c1	88	55.100	ENSETEG00000005527	TNRC6C	81	52.071	Echinops_telfairi
ENSMAMG00000023613	tnrc6c1	97	50.230	ENSEASG00005004799	TNRC6C	94	53.056	Equus_asinus_asinus
ENSMAMG00000023613	tnrc6c1	97	51.149	ENSECAG00000012486	TNRC6C	85	54.438	Equus_caballus
ENSMAMG00000023613	tnrc6c1	91	56.193	ENSEEUG00000010008	TNRC6C	76	55.424	Erinaceus_europaeus
ENSMAMG00000023613	tnrc6c1	97	50.600	ENSFCAG00000028358	TNRC6C	94	52.080	Felis_catus
ENSMAMG00000023613	tnrc6c1	100	50.300	ENSFALG00000000848	TNRC6C	95	53.935	Ficedula_albicollis
ENSMAMG00000023613	tnrc6c1	100	50.000	ENSFDAG00000010368	TNRC6C	92	53.343	Fukomys_damarensis
ENSMAMG00000023613	tnrc6c1	99	82.172	ENSFHEG00000002936	tnrc6c1	99	81.745	Fundulus_heteroclitus
ENSMAMG00000023613	tnrc6c1	100	52.740	ENSGALG00000001725	TNRC6C	94	57.112	Gallus_gallus
ENSMAMG00000023613	tnrc6c1	100	82.422	ENSGAFG00000019019	tnrc6c1	100	81.410	Gambusia_affinis
ENSMAMG00000023613	tnrc6c1	99	76.787	ENSGACG00000012320	tnrc6c1	99	74.567	Gasterosteus_aculeatus
ENSMAMG00000023613	tnrc6c1	100	52.055	ENSGAGG00000022043	TNRC6C	90	55.627	Gopherus_agassizii
ENSMAMG00000023613	tnrc6c1	100	51.315	ENSGGOG00000011304	TNRC6C	94	55.216	Gorilla_gorilla
ENSMAMG00000023613	tnrc6c1	100	82.522	ENSHBUG00000010846	tnrc6c1	100	82.101	Haplochromis_burtoni
ENSMAMG00000023613	tnrc6c1	100	49.944	ENSHGLG00000004809	TNRC6C	95	53.733	Heterocephalus_glaber_female
ENSMAMG00000023613	tnrc6c1	100	49.721	ENSHGLG00100012597	TNRC6C	95	53.084	Heterocephalus_glaber_male
ENSMAMG00000023613	tnrc6c1	100	61.187	ENSIPUG00000000818	tnrc6c1	98	60.886	Ictalurus_punctatus
ENSMAMG00000023613	tnrc6c1	85	54.278	ENSSTOG00000009101	TNRC6C	95	52.259	Ictidomys_tridecemlineatus
ENSMAMG00000023613	tnrc6c1	99	47.657	ENSJJAG00000017055	Tnrc6c	95	52.331	Jaculus_jaculus
ENSMAMG00000023613	tnrc6c1	100	78.894	ENSKMAG00000021023	tnrc6c1	100	76.412	Kryptolebias_marmoratus
ENSMAMG00000023613	tnrc6c1	92	65.363	ENSLACG00000015283	TNRC6C	90	62.887	Latimeria_chalumnae
ENSMAMG00000023613	tnrc6c1	99	76.385	ENSLOCG00000013377	tnrc6c1	96	79.883	Lepisosteus_oculatus
ENSMAMG00000023613	tnrc6c1	97	51.134	ENSLAFG00000011122	TNRC6C	84	54.046	Loxodonta_africana
ENSMAMG00000023613	tnrc6c1	100	51.314	ENSMFAG00000043943	TNRC6C	94	55.108	Macaca_fascicularis
ENSMAMG00000023613	tnrc6c1	100	51.258	ENSMMUG00000011924	TNRC6C	94	54.094	Macaca_mulatta
ENSMAMG00000023613	tnrc6c1	100	51.001	ENSMNEG00000030405	TNRC6C	95	53.275	Macaca_nemestrina
ENSMAMG00000023613	tnrc6c1	100	51.314	ENSMLEG00000033436	TNRC6C	94	55.108	Mandrillus_leucophaeus
ENSMAMG00000023613	tnrc6c1	99	82.391	ENSMZEG00005010920	tnrc6c1	100	80.983	Maylandia_zebra
ENSMAMG00000023613	tnrc6c1	93	67.384	ENSMGAG00000003906	TNRC6C	85	49.554	Meleagris_gallopavo
ENSMAMG00000023613	tnrc6c1	97	49.971	ENSMAUG00000021618	Tnrc6c	88	52.219	Mesocricetus_auratus
ENSMAMG00000023613	tnrc6c1	100	50.390	ENSMICG00000003952	TNRC6C	94	54.830	Microcebus_murinus
ENSMAMG00000023613	tnrc6c1	97	50.000	ENSMOCG00000015879	Tnrc6c	95	53.231	Microtus_ochrogaster
ENSMAMG00000023613	tnrc6c1	100	79.681	ENSMMOG00000005203	tnrc6c1	100	82.116	Mola_mola
ENSMAMG00000023613	tnrc6c1	100	48.797	ENSMODG00000001785	TNRC6C	95	52.749	Monodelphis_domestica
ENSMAMG00000023613	tnrc6c1	97	50.431	MGP_CAROLIEiJ_G0017465	Tnrc6c	95	52.643	Mus_caroli
ENSMAMG00000023613	tnrc6c1	97	50.603	ENSMUSG00000025571	Tnrc6c	95	52.851	Mus_musculus
ENSMAMG00000023613	tnrc6c1	97	50.144	MGP_PahariEiJ_G0018593	Tnrc6c	95	52.643	Mus_pahari
ENSMAMG00000023613	tnrc6c1	97	50.431	MGP_SPRETEiJ_G0018309	Tnrc6c	95	52.643	Mus_spretus
ENSMAMG00000023613	tnrc6c1	100	49.916	ENSMPUG00000013348	TNRC6C	71	53.659	Mustela_putorius_furo
ENSMAMG00000023613	tnrc6c1	97	49.228	ENSMLUG00000014431	TNRC6C	71	51.413	Myotis_lucifugus
ENSMAMG00000023613	tnrc6c1	100	49.221	ENSNGAG00000012203	Tnrc6c	95	52.295	Nannospalax_galili
ENSMAMG00000023613	tnrc6c1	100	82.746	ENSNBRG00000005344	tnrc6c1	100	82.208	Neolamprologus_brichardi
ENSMAMG00000023613	tnrc6c1	100	49.386	ENSNLEG00000000047	TNRC6C	84	51.739	Nomascus_leucogenys
ENSMAMG00000023613	tnrc6c1	93	59.933	ENSMEUG00000005104	TNRC6C	71	66.543	Notamacropus_eugenii
ENSMAMG00000023613	tnrc6c1	100	50.307	ENSODEG00000012499	TNRC6C	94	53.921	Octodon_degus
ENSMAMG00000023613	tnrc6c1	94	83.583	ENSONIG00000002210	tnrc6c1	100	82.522	Oreochromis_niloticus
ENSMAMG00000023613	tnrc6c1	67	84.375	ENSOANG00000009758	-	68	84.375	Ornithorhynchus_anatinus
ENSMAMG00000023613	tnrc6c1	100	77.307	ENSORLG00000009837	tnrc6c1	100	86.131	Oryzias_latipes
ENSMAMG00000023613	tnrc6c1	100	75.547	ENSORLG00020016510	tnrc6c1	100	77.217	Oryzias_latipes_hni
ENSMAMG00000023613	tnrc6c1	80	74.170	ENSORLG00015000171	tnrc6c1	99	74.063	Oryzias_latipes_hsok
ENSMAMG00000023613	tnrc6c1	100	78.895	ENSOMEG00000000357	tnrc6c1	100	78.617	Oryzias_melastigma
ENSMAMG00000023613	tnrc6c1	86	53.571	ENSOGAG00000007197	TNRC6C	88	53.911	Otolemur_garnettii
ENSMAMG00000023613	tnrc6c1	93	50.000	ENSOARG00000006041	TNRC6C	94	53.206	Ovis_aries
ENSMAMG00000023613	tnrc6c1	100	51.285	ENSPPAG00000027160	TNRC6C	94	54.729	Pan_paniscus
ENSMAMG00000023613	tnrc6c1	97	50.715	ENSPPRG00000018881	TNRC6C	80	52.241	Panthera_pardus
ENSMAMG00000023613	tnrc6c1	86	56.184	ENSPTIG00000008791	TNRC6C	85	51.130	Panthera_tigris_altaica
ENSMAMG00000023613	tnrc6c1	100	51.341	ENSPTRG00000009699	TNRC6C	94	54.798	Pan_troglodytes
ENSMAMG00000023613	tnrc6c1	100	51.057	ENSPANG00000019994	TNRC6C	95	53.342	Papio_anubis
ENSMAMG00000023613	tnrc6c1	97	58.709	ENSPKIG00000005428	tnrc6c1	100	57.674	Paramormyrops_kingsleyae
ENSMAMG00000023613	tnrc6c1	100	49.944	ENSPSIG00000018069	TNRC6C	94	53.659	Pelodiscus_sinensis
ENSMAMG00000023613	tnrc6c1	93	78.097	ENSPMGG00000022911	tnrc6c1	100	77.866	Periophthalmus_magnuspinnatus
ENSMAMG00000023613	tnrc6c1	100	49.501	ENSPEMG00000009785	Tnrc6c	95	52.503	Peromyscus_maniculatus_bairdii
ENSMAMG00000023613	tnrc6c1	52	41.529	ENSPCIG00000017421	-	79	44.694	Phascolarctos_cinereus
ENSMAMG00000023613	tnrc6c1	99	82.155	ENSPFOG00000012560	tnrc6c1	99	80.011	Poecilia_formosa
ENSMAMG00000023613	tnrc6c1	100	79.169	ENSPLAG00000021055	tnrc6c1	100	82.056	Poecilia_latipinna
ENSMAMG00000023613	tnrc6c1	100	51.397	ENSPPYG00000008679	TNRC6C	83	54.937	Pongo_abelii
ENSMAMG00000023613	tnrc6c1	86	66.742	ENSPCAG00000012510	TNRC6C	79	60.851	Procavia_capensis
ENSMAMG00000023613	tnrc6c1	100	50.668	ENSPCOG00000021451	TNRC6C	94	55.045	Propithecus_coquereli
ENSMAMG00000023613	tnrc6c1	83	61.364	ENSPVAG00000002008	TNRC6C	73	64.167	Pteropus_vampyrus
ENSMAMG00000023613	tnrc6c1	100	80.747	ENSPNYG00000014477	tnrc6c1	100	81.095	Pundamilia_nyererei
ENSMAMG00000023613	tnrc6c1	97	49.914	ENSRNOG00000022395	Tnrc6c	80	53.138	Rattus_norvegicus
ENSMAMG00000023613	tnrc6c1	100	51.314	ENSRBIG00000027777	TNRC6C	94	55.108	Rhinopithecus_bieti
ENSMAMG00000023613	tnrc6c1	100	51.314	ENSRROG00000042912	TNRC6C	94	55.108	Rhinopithecus_roxellana
ENSMAMG00000023613	tnrc6c1	100	51.172	ENSSBOG00000023981	TNRC6C	94	54.848	Saimiri_boliviensis_boliviensis
ENSMAMG00000023613	tnrc6c1	56	65.180	ENSSHAG00000018330	-	100	63.685	Sarcophilus_harrisii
ENSMAMG00000023613	tnrc6c1	99	60.168	ENSSFOG00015006475	tnrc6c1	99	58.494	Scleropages_formosus
ENSMAMG00000023613	tnrc6c1	93	63.333	ENSSFOG00015004735	-	99	68.653	Scleropages_formosus
ENSMAMG00000023613	tnrc6c1	100	85.832	ENSSMAG00000012761	tnrc6c1	100	85.714	Scophthalmus_maximus
ENSMAMG00000023613	tnrc6c1	99	89.586	ENSSDUG00000002366	tnrc6c1	98	89.527	Seriola_dumerili
ENSMAMG00000023613	tnrc6c1	94	89.750	ENSSLDG00000025613	tnrc6c1	100	89.438	Seriola_lalandi_dorsalis
ENSMAMG00000023613	tnrc6c1	81	65.546	ENSSARG00000006816	TNRC6C	76	65.546	Sorex_araneus
ENSMAMG00000023613	tnrc6c1	86	55.348	ENSSPUG00000007341	TNRC6C	91	62.069	Sphenodon_punctatus
ENSMAMG00000023613	tnrc6c1	98	87.337	ENSSPAG00000014977	tnrc6c1	98	88.026	Stegastes_partitus
ENSMAMG00000023613	tnrc6c1	97	50.346	ENSSSCG00000034373	TNRC6C	88	53.686	Sus_scrofa
ENSMAMG00000023613	tnrc6c1	100	50.306	ENSTGUG00000007733	TNRC6C	92	53.537	Taeniopygia_guttata
ENSMAMG00000023613	tnrc6c1	99	79.599	ENSTRUG00000011685	tnrc6c1	99	79.245	Takifugu_rubripes
ENSMAMG00000023613	tnrc6c1	100	75.138	ENSTNIG00000005273	tnrc6c1	100	78.528	Tetraodon_nigroviridis
ENSMAMG00000023613	tnrc6c1	71	49.123	ENSTBEG00000005046	TNRC6C	100	48.966	Tupaia_belangeri
ENSMAMG00000023613	tnrc6c1	97	50.230	ENSTTRG00000010828	TNRC6C	85	53.162	Tursiops_truncatus
ENSMAMG00000023613	tnrc6c1	97	49.884	ENSUMAG00000013614	TNRC6C	81	51.958	Ursus_maritimus
ENSMAMG00000023613	tnrc6c1	54	50.712	ENSVPAG00000006765	-	81	63.524	Vicugna_pacos
ENSMAMG00000023613	tnrc6c1	97	52.504	ENSVVUG00000015268	TNRC6C	94	56.000	Vulpes_vulpes
ENSMAMG00000023613	tnrc6c1	97	49.827	ENSXETG00000019470	tnrc6c	80	52.464	Xenopus_tropicalis
ENSMAMG00000023613	tnrc6c1	100	82.598	ENSXMAG00000025971	tnrc6c1	100	81.722	Xiphophorus_maculatus