EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000023652 (Gene tree)
Gene ID: 113129990
Gene Symbol: patz1
Alias: -
Full Name: POZ/BTB and AT hook containing zinc finger 1
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 11321 bases
Position: chrOOHQ01000082.1:12527411-12538731
Accession: 113129990
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000035234	zf-C2H2	PF00096.26	7.4e-31	1	5
ENSMAMP00000035234	zf-C2H2	PF00096.26	7.4e-31	2	5
ENSMAMP00000035234	zf-C2H2	PF00096.26	7.4e-31	3	5
ENSMAMP00000035234	zf-C2H2	PF00096.26	7.4e-31	4	5
ENSMAMP00000035234	zf-C2H2	PF00096.26	7.4e-31	5	5
ENSMAMP00000035237	zf-C2H2	PF00096.26	6.3e-24	1	4
ENSMAMP00000035237	zf-C2H2	PF00096.26	6.3e-24	2	4
ENSMAMP00000035237	zf-C2H2	PF00096.26	6.3e-24	3	4
ENSMAMP00000035237	zf-C2H2	PF00096.26	6.3e-24	4	4
ENSMAMP00000035234	zf-met	PF12874.7	8.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000036140	-	5988	-	ENSMAMP00000035234	702 (aa)	XP_026162058	UPI000E4553D5
ENSMAMT00000036143	-	5829	-	ENSMAMP00000035237	649 (aa)	XP_026162059	UPI000E4636CE

Gene Model

Click here to download ENSMAMG00000023652's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000023652's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000023652	patz1	53	37.324	ENSMAMG00000013419	prdm5	82	37.324
ENSMAMG00000023652	patz1	61	30.612	ENSMAMG00000018137	-	60	30.612
ENSMAMG00000023652	patz1	63	32.271	ENSMAMG00000022206	-	80	32.271
ENSMAMG00000023652	patz1	53	33.632	ENSMAMG00000016484	-	91	33.632
ENSMAMG00000023652	patz1	56	32.231	ENSMAMG00000010902	-	58	32.231
ENSMAMG00000023652	patz1	71	40.260	ENSMAMG00000005782	zbtb34	85	40.260
ENSMAMG00000023652	patz1	51	35.156	ENSMAMG00000014758	-	83	37.952
ENSMAMG00000023652	patz1	57	36.364	ENSMAMG00000022147	-	67	38.824
ENSMAMG00000023652	patz1	55	32.044	ENSMAMG00000000789	-	75	32.044
ENSMAMG00000023652	patz1	53	36.364	ENSMAMG00000018071	-	72	36.686
ENSMAMG00000023652	patz1	53	31.102	ENSMAMG00000015670	-	66	30.252
ENSMAMG00000023652	patz1	50	32.121	ENSMAMG00000016519	-	89	30.242
ENSMAMG00000023652	patz1	73	31.737	ENSMAMG00000000234	zbtb24	68	31.737
ENSMAMG00000023652	patz1	85	34.975	ENSMAMG00000001808	zbtb47b	86	34.975
ENSMAMG00000023652	patz1	54	31.628	ENSMAMG00000017911	ZNF319	81	31.628
ENSMAMG00000023652	patz1	57	31.949	ENSMAMG00000016542	-	63	31.949
ENSMAMG00000023652	patz1	55	32.042	ENSMAMG00000017946	-	90	32.569
ENSMAMG00000023652	patz1	59	30.189	ENSMAMG00000019301	-	94	34.731
ENSMAMG00000023652	patz1	57	31.174	ENSMAMG00000013025	-	50	31.443
ENSMAMG00000023652	patz1	70	31.754	ENSMAMG00000011931	-	71	32.787
ENSMAMG00000023652	patz1	70	36.111	ENSMAMG00000001157	znf236	66	36.111
ENSMAMG00000023652	patz1	53	30.317	ENSMAMG00000019385	-	69	35.758
ENSMAMG00000023652	patz1	54	31.452	ENSMAMG00000016119	-	85	32.530
ENSMAMG00000023652	patz1	52	40.000	ENSMAMG00000022145	-	64	40.000
ENSMAMG00000023652	patz1	56	33.500	ENSMAMG00000022502	-	95	33.500
ENSMAMG00000023652	patz1	90	36.054	ENSMAMG00000018656	ZBTB14	92	36.054
ENSMAMG00000023652	patz1	53	33.469	ENSMAMG00000006312	-	92	30.542
ENSMAMG00000023652	patz1	55	34.161	ENSMAMG00000002083	-	97	33.533
ENSMAMG00000023652	patz1	70	33.333	ENSMAMG00000002166	zbtb41	55	33.333
ENSMAMG00000023652	patz1	53	32.886	ENSMAMG00000004457	PRDM15	65	32.886
ENSMAMG00000023652	patz1	55	34.706	ENSMAMG00000018114	-	81	39.181
ENSMAMG00000023652	patz1	58	34.911	ENSMAMG00000017939	-	77	36.585
ENSMAMG00000023652	patz1	61	33.636	ENSMAMG00000009313	znf646	65	33.636
ENSMAMG00000023652	patz1	52	33.043	ENSMAMG00000002731	znf1056	84	33.043
ENSMAMG00000023652	patz1	76	43.750	ENSMAMG00000002865	bcl6b	91	43.750
ENSMAMG00000023652	patz1	53	35.227	ENSMAMG00000022154	-	52	35.227
ENSMAMG00000023652	patz1	55	34.513	ENSMAMG00000017518	zbtb16b	70	34.513
ENSMAMG00000023652	patz1	51	30.415	ENSMAMG00000009051	-	80	34.483
ENSMAMG00000023652	patz1	74	37.795	ENSMAMG00000006459	-	88	37.795
ENSMAMG00000023652	patz1	59	36.145	ENSMAMG00000014743	-	53	36.145
ENSMAMG00000023652	patz1	56	32.836	ENSMAMG00000018536	-	61	32.836
ENSMAMG00000023652	patz1	56	33.945	ENSMAMG00000004684	znf526	62	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000023652	patz1	100	57.771	ENSG00000100105	PATZ1	100	57.625	Homo_sapiens
ENSMAMG00000023652	patz1	100	92.105	ENSAPOG00000018447	patz1	100	92.105	Acanthochromis_polyacanthus
ENSMAMG00000023652	patz1	100	57.143	ENSAMEG00000007074	PATZ1	100	57.007	Ailuropoda_melanoleuca
ENSMAMG00000023652	patz1	100	85.795	ENSACIG00000016779	patz1	100	85.795	Amphilophus_citrinellus
ENSMAMG00000023652	patz1	100	90.658	ENSAPEG00000013354	patz1	100	90.658	Amphiprion_percula
ENSMAMG00000023652	patz1	100	90.283	ENSATEG00000011260	patz1	100	90.283	Anabas_testudineus
ENSMAMG00000023652	patz1	89	56.735	ENSAPLG00000003934	PATZ1	99	56.735	Anas_platyrhynchos
ENSMAMG00000023652	patz1	100	57.771	ENSANAG00000029603	PATZ1	100	57.625	Aotus_nancymaae
ENSMAMG00000023652	patz1	100	66.467	ENSAMXG00000002273	patz1	100	64.121	Astyanax_mexicanus
ENSMAMG00000023652	patz1	100	57.625	ENSBTAG00000005478	PATZ1	100	57.478	Bos_taurus
ENSMAMG00000023652	patz1	100	57.771	ENSCJAG00000010978	PATZ1	100	57.625	Callithrix_jacchus
ENSMAMG00000023652	patz1	100	57.625	ENSCAFG00000013087	PATZ1	100	56.735	Canis_familiaris
ENSMAMG00000023652	patz1	100	57.918	ENSCHIG00000020203	PATZ1	100	57.771	Capra_hircus
ENSMAMG00000023652	patz1	100	57.918	ENSTSYG00000033183	PATZ1	100	57.771	Carlito_syrichta
ENSMAMG00000023652	patz1	100	57.771	ENSCCAG00000028772	PATZ1	100	57.625	Cebus_capucinus
ENSMAMG00000023652	patz1	100	57.918	ENSCATG00000006101	PATZ1	100	57.625	Cercocebus_atys
ENSMAMG00000023652	patz1	100	57.123	ENSCPBG00000011277	PATZ1	100	57.531	Chrysemys_picta_bellii
ENSMAMG00000023652	patz1	100	57.918	ENSCANG00000024972	PATZ1	100	57.625	Colobus_angolensis_palliatus
ENSMAMG00000023652	patz1	100	56.598	ENSCGRG00001004071	Patz1	100	56.305	Cricetulus_griseus_chok1gshd
ENSMAMG00000023652	patz1	93	56.740	ENSCGRG00000004814	Patz1	100	56.426	Cricetulus_griseus_crigri
ENSMAMG00000023652	patz1	100	80.622	ENSCSEG00000001385	patz1	100	81.127	Cynoglossus_semilaevis
ENSMAMG00000023652	patz1	100	84.604	ENSCVAG00000007684	patz1	100	84.756	Cyprinodon_variegatus
ENSMAMG00000023652	patz1	100	67.428	ENSDARG00000076584	patz1	100	67.428	Danio_rerio
ENSMAMG00000023652	patz1	90	56.647	ENSDNOG00000003183	PATZ1	100	56.495	Dasypus_novemcinctus
ENSMAMG00000023652	patz1	100	57.771	ENSDORG00000023834	Patz1	100	57.625	Dipodomys_ordii
ENSMAMG00000023652	patz1	100	57.771	ENSECAG00000025030	PATZ1	100	57.625	Equus_caballus
ENSMAMG00000023652	patz1	100	75.547	ENSELUG00000002333	patz1	100	75.547	Esox_lucius
ENSMAMG00000023652	patz1	100	57.625	ENSFCAG00000030253	PATZ1	100	57.478	Felis_catus
ENSMAMG00000023652	patz1	90	56.672	ENSFALG00000007450	PATZ1	100	56.672	Ficedula_albicollis
ENSMAMG00000023652	patz1	97	54.161	ENSFDAG00000005614	PATZ1	100	54.020	Fukomys_damarensis
ENSMAMG00000023652	patz1	100	83.817	ENSFHEG00000014755	patz1	100	83.817	Fundulus_heteroclitus
ENSMAMG00000023652	patz1	100	71.268	ENSGMOG00000001062	patz1	100	71.549	Gadus_morhua
ENSMAMG00000023652	patz1	100	56.334	ENSGALG00000006934	PATZ1	100	56.334	Gallus_gallus
ENSMAMG00000023652	patz1	100	86.391	ENSGAFG00000010053	patz1	100	86.391	Gambusia_affinis
ENSMAMG00000023652	patz1	89	57.302	ENSGAGG00000003214	PATZ1	100	57.302	Gopherus_agassizii
ENSMAMG00000023652	patz1	100	57.771	ENSGGOG00000017171	PATZ1	100	57.625	Gorilla_gorilla
ENSMAMG00000023652	patz1	100	81.679	ENSHCOG00000017644	patz1	93	82.290	Hippocampus_comes
ENSMAMG00000023652	patz1	100	67.814	ENSIPUG00000017653	patz1	99	67.814	Ictalurus_punctatus
ENSMAMG00000023652	patz1	100	57.478	ENSSTOG00000020707	PATZ1	100	57.331	Ictidomys_tridecemlineatus
ENSMAMG00000023652	patz1	100	57.122	ENSJJAG00000015259	Patz1	100	57.299	Jaculus_jaculus
ENSMAMG00000023652	patz1	100	81.560	ENSKMAG00000008157	patz1	100	82.153	Kryptolebias_marmoratus
ENSMAMG00000023652	patz1	100	57.895	ENSLAFG00000002317	PATZ1	100	57.756	Loxodonta_africana
ENSMAMG00000023652	patz1	100	58.065	ENSMFAG00000040968	PATZ1	100	57.918	Macaca_fascicularis
ENSMAMG00000023652	patz1	100	58.065	ENSMNEG00000037588	PATZ1	100	57.918	Macaca_nemestrina
ENSMAMG00000023652	patz1	100	57.918	ENSMLEG00000030938	PATZ1	100	57.625	Mandrillus_leucophaeus
ENSMAMG00000023652	patz1	89	53.956	ENSMGAG00000008439	PATZ1	100	53.956	Meleagris_gallopavo
ENSMAMG00000023652	patz1	100	57.918	ENSMAUG00000004129	Patz1	100	57.625	Mesocricetus_auratus
ENSMAMG00000023652	patz1	100	57.771	ENSMICG00000005430	PATZ1	100	57.625	Microcebus_murinus
ENSMAMG00000023652	patz1	100	57.918	ENSMOCG00000014488	Patz1	100	57.625	Microtus_ochrogaster
ENSMAMG00000023652	patz1	100	70.942	ENSMMOG00000021679	patz1	100	70.942	Mola_mola
ENSMAMG00000023652	patz1	100	89.127	ENSMALG00000021172	patz1	100	89.127	Monopterus_albus
ENSMAMG00000023652	patz1	100	57.918	MGP_CAROLIEiJ_G0016007	Patz1	100	57.625	Mus_caroli
ENSMAMG00000023652	patz1	100	57.918	ENSMUSG00000020453	Patz1	100	57.625	Mus_musculus
ENSMAMG00000023652	patz1	100	57.918	MGP_PahariEiJ_G0016884	Patz1	100	57.625	Mus_pahari
ENSMAMG00000023652	patz1	100	57.918	MGP_SPRETEiJ_G0016846	Patz1	100	57.625	Mus_spretus
ENSMAMG00000023652	patz1	100	57.771	ENSMLUG00000009942	PATZ1	100	57.478	Myotis_lucifugus
ENSMAMG00000023652	patz1	100	57.918	ENSNGAG00000010268	Patz1	100	57.625	Nannospalax_galili
ENSMAMG00000023652	patz1	100	85.977	ENSNBRG00000016032	patz1	100	85.977	Neolamprologus_brichardi
ENSMAMG00000023652	patz1	71	56.151	ENSMEUG00000016293	PATZ1	97	56.151	Notamacropus_eugenii
ENSMAMG00000023652	patz1	100	57.331	ENSODEG00000003589	PATZ1	100	57.331	Octodon_degus
ENSMAMG00000023652	patz1	100	89.144	ENSONIG00000004248	patz1	100	89.144	Oreochromis_niloticus
ENSMAMG00000023652	patz1	100	57.456	ENSOANG00000014654	PATZ1	100	57.592	Ornithorhynchus_anatinus
ENSMAMG00000023652	patz1	100	83.936	ENSORLG00020010937	patz1	100	83.079	Oryzias_latipes_hni
ENSMAMG00000023652	patz1	100	83.333	ENSORLG00015007396	patz1	100	83.333	Oryzias_latipes_hsok
ENSMAMG00000023652	patz1	100	83.614	ENSOMEG00000006636	patz1	100	83.614	Oryzias_melastigma
ENSMAMG00000023652	patz1	100	57.143	ENSOGAG00000027905	PATZ1	100	57.007	Otolemur_garnettii
ENSMAMG00000023652	patz1	100	57.771	ENSPPAG00000033227	PATZ1	100	57.625	Pan_paniscus
ENSMAMG00000023652	patz1	100	57.625	ENSPPRG00000001573	PATZ1	100	57.478	Panthera_pardus
ENSMAMG00000023652	patz1	89	56.850	ENSPTIG00000007937	PATZ1	90	56.672	Panthera_tigris_altaica
ENSMAMG00000023652	patz1	100	57.771	ENSPTRG00000014268	PATZ1	100	57.625	Pan_troglodytes
ENSMAMG00000023652	patz1	100	57.918	ENSPANG00000006821	PATZ1	100	56.599	Papio_anubis
ENSMAMG00000023652	patz1	100	71.540	ENSPKIG00000019584	patz1	100	71.540	Paramormyrops_kingsleyae
ENSMAMG00000023652	patz1	62	60.321	ENSPSIG00000011562	-	100	62.402	Pelodiscus_sinensis
ENSMAMG00000023652	patz1	72	58.575	ENSPSIG00000016553	-	85	60.000	Pelodiscus_sinensis
ENSMAMG00000023652	patz1	100	77.620	ENSPMGG00000010196	patz1	100	77.620	Periophthalmus_magnuspinnatus
ENSMAMG00000023652	patz1	100	57.625	ENSPEMG00000005321	Patz1	100	57.625	Peromyscus_maniculatus_bairdii
ENSMAMG00000023652	patz1	100	87.023	ENSPLAG00000010425	patz1	100	87.023	Poecilia_latipinna
ENSMAMG00000023652	patz1	100	87.156	ENSPMEG00000000255	patz1	100	87.156	Poecilia_mexicana
ENSMAMG00000023652	patz1	100	82.982	ENSPREG00000002440	patz1	100	82.982	Poecilia_reticulata
ENSMAMG00000023652	patz1	100	56.735	ENSPPYG00000011732	PATZ1	99	57.749	Pongo_abelii
ENSMAMG00000023652	patz1	100	57.771	ENSPCOG00000019729	PATZ1	100	57.625	Propithecus_coquereli
ENSMAMG00000023652	patz1	100	56.871	ENSPVAG00000001749	PATZ1	100	56.735	Pteropus_vampyrus
ENSMAMG00000023652	patz1	100	89.587	ENSPNYG00000013542	patz1	100	89.587	Pundamilia_nyererei
ENSMAMG00000023652	patz1	89	63.820	ENSPNAG00000017222	patz1	100	63.820	Pygocentrus_nattereri
ENSMAMG00000023652	patz1	100	57.918	ENSRBIG00000044231	PATZ1	100	57.625	Rhinopithecus_bieti
ENSMAMG00000023652	patz1	100	57.918	ENSRROG00000037155	PATZ1	100	57.625	Rhinopithecus_roxellana
ENSMAMG00000023652	patz1	100	57.771	ENSSBOG00000003894	PATZ1	100	57.625	Saimiri_boliviensis_boliviensis
ENSMAMG00000023652	patz1	81	96.795	ENSSFOG00015013244	patz1	78	96.795	Scleropages_formosus
ENSMAMG00000023652	patz1	99	56.181	ENSSPUG00000015298	PATZ1	97	56.593	Sphenodon_punctatus
ENSMAMG00000023652	patz1	89	56.825	ENSSSCG00000010027	PATZ1	100	57.539	Sus_scrofa
ENSMAMG00000023652	patz1	100	86.402	ENSTRUG00000015366	patz1	100	86.402	Takifugu_rubripes
ENSMAMG00000023652	patz1	100	56.735	ENSTTRG00000010279	PATZ1	100	56.599	Tursiops_truncatus
ENSMAMG00000023652	patz1	100	57.625	ENSUAMG00000015014	PATZ1	100	57.478	Ursus_americanus
ENSMAMG00000023652	patz1	100	55.446	ENSXETG00000004190	patz1	100	56.577	Xenopus_tropicalis
ENSMAMG00000023652	patz1	100	86.697	ENSXMAG00000015531	patz1	100	86.697	Xiphophorus_maculatus