EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000023839 (Gene tree)
Gene ID: 113130145
Gene Symbol: rpusd4
Alias: si:ch211-14i3.3|zgc:92006
Full Name: mitochondrial RNA pseudouridine synthase rpusd4-like
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 2230 bases
Position: chrOOHQ01000082.1:14222391-14224620
Accession: 113130145
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000035475	PseudoU_synth_2	PF00849.22	6.2e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000036392	-	1237	-	ENSMAMP00000035475	385 (aa)	XP_026162294	UPI000E459B33

Gene Model

Click here to download ENSMAMG00000023839's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000023839's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000023839	rpusd4	83	50.769	ENSG00000165526	RPUSD4	85	50.769	Homo_sapiens
ENSMAMG00000023839	rpusd4	100	74.937	ENSAPOG00000011024	rpusd4	98	74.937	Acanthochromis_polyacanthus
ENSMAMG00000023839	rpusd4	85	49.240	ENSAMEG00000000127	-	85	49.240	Ailuropoda_melanoleuca
ENSMAMG00000023839	rpusd4	58	53.000	ENSAMEG00000005953	-	95	53.000	Ailuropoda_melanoleuca
ENSMAMG00000023839	rpusd4	85	75.915	ENSACIG00000003533	rpusd4	95	75.915	Amphilophus_citrinellus
ENSMAMG00000023839	rpusd4	99	74.555	ENSAOCG00000015409	rpusd4	97	74.555	Amphiprion_ocellaris
ENSMAMG00000023839	rpusd4	99	74.555	ENSAPEG00000018935	rpusd4	97	74.555	Amphiprion_percula
ENSMAMG00000023839	rpusd4	100	73.858	ENSATEG00000008059	rpusd4	97	73.858	Anabas_testudineus
ENSMAMG00000023839	rpusd4	72	50.714	ENSAPLG00000013250	RPUSD4	98	50.000	Anas_platyrhynchos
ENSMAMG00000023839	rpusd4	88	49.275	ENSACAG00000000189	RPUSD4	93	48.991	Anolis_carolinensis
ENSMAMG00000023839	rpusd4	86	48.358	ENSANAG00000024050	RPUSD4	88	48.358	Aotus_nancymaae
ENSMAMG00000023839	rpusd4	99	70.633	ENSACLG00000020996	rpusd4	99	70.633	Astatotilapia_calliptera
ENSMAMG00000023839	rpusd4	91	58.120	ENSAMXG00000031479	rpusd4	99	57.910	Astyanax_mexicanus
ENSMAMG00000023839	rpusd4	85	50.152	ENSBTAG00000020900	RPUSD4	84	50.152	Bos_taurus
ENSMAMG00000023839	rpusd4	89	48.547	ENSCJAG00000042850	RPUSD4	83	48.547	Callithrix_jacchus
ENSMAMG00000023839	rpusd4	86	50.599	ENSCAFG00000010488	RPUSD4	86	50.599	Canis_familiaris
ENSMAMG00000023839	rpusd4	86	50.599	ENSCAFG00020010621	RPUSD4	86	50.599	Canis_lupus_dingo
ENSMAMG00000023839	rpusd4	85	48.936	ENSCHIG00000009975	RPUSD4	85	48.936	Capra_hircus
ENSMAMG00000023839	rpusd4	86	50.149	ENSTSYG00000008456	RPUSD4	87	50.149	Carlito_syrichta
ENSMAMG00000023839	rpusd4	63	46.531	ENSCAPG00000006040	RPUSD4	93	46.531	Cavia_aperea
ENSMAMG00000023839	rpusd4	92	47.753	ENSCPOG00000014971	RPUSD4	92	47.753	Cavia_porcellus
ENSMAMG00000023839	rpusd4	86	48.358	ENSCCAG00000027838	RPUSD4	88	48.358	Cebus_capucinus
ENSMAMG00000023839	rpusd4	83	49.231	ENSCATG00000041570	RPUSD4	85	49.231	Cercocebus_atys
ENSMAMG00000023839	rpusd4	93	48.611	ENSCLAG00000016553	RPUSD4	93	48.611	Chinchilla_lanigera
ENSMAMG00000023839	rpusd4	83	49.231	ENSCSAG00000002274	RPUSD4	85	49.231	Chlorocebus_sabaeus
ENSMAMG00000023839	rpusd4	70	50.000	ENSCHOG00000010249	RPUSD4	95	50.000	Choloepus_hoffmanni
ENSMAMG00000023839	rpusd4	74	54.167	ENSCPBG00000011175	RPUSD4	98	54.167	Chrysemys_picta_bellii
ENSMAMG00000023839	rpusd4	93	33.787	ENSCSAVG00000000872	-	70	33.787	Ciona_savignyi
ENSMAMG00000023839	rpusd4	83	49.538	ENSCANG00000039684	RPUSD4	85	49.538	Colobus_angolensis_palliatus
ENSMAMG00000023839	rpusd4	88	48.857	ENSCGRG00001024141	Rpusd4	91	48.857	Cricetulus_griseus_chok1gshd
ENSMAMG00000023839	rpusd4	88	48.857	ENSCGRG00000014415	Rpusd4	91	48.857	Cricetulus_griseus_crigri
ENSMAMG00000023839	rpusd4	51	63.590	ENSCSEG00000006462	-	84	63.590	Cynoglossus_semilaevis
ENSMAMG00000023839	rpusd4	100	66.667	ENSCVAG00000008761	rpusd4	100	66.667	Cyprinodon_variegatus
ENSMAMG00000023839	rpusd4	95	69.648	ENSCVAG00000000392	rpusd4	100	71.186	Cyprinodon_variegatus
ENSMAMG00000023839	rpusd4	84	58.104	ENSDARG00000012674	rpusd4	90	58.104	Danio_rerio
ENSMAMG00000023839	rpusd4	88	48.538	ENSDNOG00000020026	RPUSD4	89	48.538	Dasypus_novemcinctus
ENSMAMG00000023839	rpusd4	90	46.839	ENSDORG00000016717	Rpusd4	90	46.839	Dipodomys_ordii
ENSMAMG00000023839	rpusd4	93	47.514	ENSETEG00000013953	RPUSD4	93	47.514	Echinops_telfairi
ENSMAMG00000023839	rpusd4	86	49.704	ENSEASG00005022982	RPUSD4	88	49.704	Equus_asinus_asinus
ENSMAMG00000023839	rpusd4	86	49.704	ENSECAG00000000557	RPUSD4	88	49.704	Equus_caballus
ENSMAMG00000023839	rpusd4	67	53.039	ENSEEUG00000014036	RPUSD4	67	53.039	Erinaceus_europaeus
ENSMAMG00000023839	rpusd4	92	59.615	ENSELUG00000008075	rpusd4	95	59.615	Esox_lucius
ENSMAMG00000023839	rpusd4	85	48.943	ENSFCAG00000029789	RPUSD4	86	48.943	Felis_catus
ENSMAMG00000023839	rpusd4	85	47.720	ENSFALG00000005171	RPUSD4	96	47.720	Ficedula_albicollis
ENSMAMG00000023839	rpusd4	92	47.619	ENSFDAG00000014307	RPUSD4	94	47.619	Fukomys_damarensis
ENSMAMG00000023839	rpusd4	100	71.392	ENSFHEG00000004329	rpusd4	100	71.392	Fundulus_heteroclitus
ENSMAMG00000023839	rpusd4	85	64.220	ENSGMOG00000017726	rpusd4	99	63.501	Gadus_morhua
ENSMAMG00000023839	rpusd4	73	52.632	ENSGALG00000024326	RPUSD4	97	46.875	Gallus_gallus
ENSMAMG00000023839	rpusd4	100	68.974	ENSGAFG00000021559	rpusd4	100	68.974	Gambusia_affinis
ENSMAMG00000023839	rpusd4	88	74.412	ENSGACG00000001657	rpusd4	100	75.294	Gasterosteus_aculeatus
ENSMAMG00000023839	rpusd4	91	49.577	ENSGAGG00000000132	RPUSD4	96	49.577	Gopherus_agassizii
ENSMAMG00000023839	rpusd4	83	51.077	ENSGGOG00000016494	RPUSD4	85	51.077	Gorilla_gorilla
ENSMAMG00000023839	rpusd4	99	70.127	ENSHBUG00000022838	rpusd4	99	70.127	Haplochromis_burtoni
ENSMAMG00000023839	rpusd4	86	49.254	ENSHGLG00000002285	RPUSD4	87	49.254	Heterocephalus_glaber_female
ENSMAMG00000023839	rpusd4	86	49.254	ENSHGLG00100006385	RPUSD4	87	49.254	Heterocephalus_glaber_male
ENSMAMG00000023839	rpusd4	99	67.692	ENSHCOG00000006612	rpusd4	99	67.692	Hippocampus_comes
ENSMAMG00000023839	rpusd4	91	56.534	ENSIPUG00000023879	rusd4	90	56.534	Ictalurus_punctatus
ENSMAMG00000023839	rpusd4	92	49.020	ENSSTOG00000025280	RPUSD4	96	49.020	Ictidomys_tridecemlineatus
ENSMAMG00000023839	rpusd4	86	50.000	ENSJJAG00000018673	Rpusd4	89	50.000	Jaculus_jaculus
ENSMAMG00000023839	rpusd4	99	68.542	ENSKMAG00000021805	rpusd4	100	68.542	Kryptolebias_marmoratus
ENSMAMG00000023839	rpusd4	94	74.016	ENSLBEG00000020394	rpusd4	93	80.299	Labrus_bergylta
ENSMAMG00000023839	rpusd4	85	52.108	ENSLACG00000011028	RPUSD4	90	49.727	Latimeria_chalumnae
ENSMAMG00000023839	rpusd4	97	42.857	ENSLOCG00000003124	rpusd4	97	42.857	Lepisosteus_oculatus
ENSMAMG00000023839	rpusd4	84	49.846	ENSLAFG00000005211	RPUSD4	100	43.051	Loxodonta_africana
ENSMAMG00000023839	rpusd4	83	49.538	ENSMFAG00000039513	RPUSD4	85	49.538	Macaca_fascicularis
ENSMAMG00000023839	rpusd4	83	49.231	ENSMMUG00000007933	RPUSD4	85	49.231	Macaca_mulatta
ENSMAMG00000023839	rpusd4	83	49.538	ENSMNEG00000027414	RPUSD4	85	49.538	Macaca_nemestrina
ENSMAMG00000023839	rpusd4	83	49.538	ENSMLEG00000042461	RPUSD4	85	49.538	Mandrillus_leucophaeus
ENSMAMG00000023839	rpusd4	99	70.769	ENSMZEG00005011999	rpusd4	99	70.769	Maylandia_zebra
ENSMAMG00000023839	rpusd4	73	50.877	ENSMGAG00000000840	RPUSD4	99	47.904	Meleagris_gallopavo
ENSMAMG00000023839	rpusd4	89	48.857	ENSMAUG00000010280	Rpusd4	91	48.857	Mesocricetus_auratus
ENSMAMG00000023839	rpusd4	86	51.045	ENSMICG00000015979	RPUSD4	97	50.307	Microcebus_murinus
ENSMAMG00000023839	rpusd4	87	48.266	ENSMOCG00000000661	Rpusd4	90	48.266	Microtus_ochrogaster
ENSMAMG00000023839	rpusd4	84	75.309	ENSMMOG00000021731	rpusd4	96	75.309	Mola_mola
ENSMAMG00000023839	rpusd4	81	51.746	ENSMODG00000004521	RPUSD4	79	51.746	Monodelphis_domestica
ENSMAMG00000023839	rpusd4	82	81.329	ENSMALG00000005839	rpusd4	98	79.692	Monopterus_albus
ENSMAMG00000023839	rpusd4	86	49.254	MGP_CAROLIEiJ_G0031954	Rpusd4	87	49.254	Mus_caroli
ENSMAMG00000023839	rpusd4	98	46.073	ENSMUSG00000032044	Rpusd4	87	49.851	Mus_musculus
ENSMAMG00000023839	rpusd4	86	48.955	MGP_PahariEiJ_G0014819	Rpusd4	87	48.955	Mus_pahari
ENSMAMG00000023839	rpusd4	86	49.552	MGP_SPRETEiJ_G0033078	Rpusd4	87	49.552	Mus_spretus
ENSMAMG00000023839	rpusd4	86	49.401	ENSMPUG00000006608	RPUSD4	87	49.401	Mustela_putorius_furo
ENSMAMG00000023839	rpusd4	66	49.225	ENSMLUG00000029348	-	99	49.225	Myotis_lucifugus
ENSMAMG00000023839	rpusd4	86	50.299	ENSMLUG00000017328	-	85	50.299	Myotis_lucifugus
ENSMAMG00000023839	rpusd4	86	50.296	ENSNGAG00000020847	Rpusd4	88	50.296	Nannospalax_galili
ENSMAMG00000023839	rpusd4	85	77.439	ENSNBRG00000005207	rpusd4	94	77.439	Neolamprologus_brichardi
ENSMAMG00000023839	rpusd4	83	49.846	ENSNLEG00000007465	RPUSD4	85	49.846	Nomascus_leucogenys
ENSMAMG00000023839	rpusd4	86	51.952	ENSMEUG00000004370	RPUSD4	87	51.952	Notamacropus_eugenii
ENSMAMG00000023839	rpusd4	94	47.527	ENSODEG00000004577	RPUSD4	94	47.527	Octodon_degus
ENSMAMG00000023839	rpusd4	99	70.127	ENSONIG00000018879	rpusd4	99	70.127	Oreochromis_niloticus
ENSMAMG00000023839	rpusd4	76	46.644	ENSOANG00000007247	RPUSD4	94	46.644	Ornithorhynchus_anatinus
ENSMAMG00000023839	rpusd4	86	51.335	ENSOCUG00000017039	RPUSD4	87	51.335	Oryctolagus_cuniculus
ENSMAMG00000023839	rpusd4	92	69.209	ENSORLG00000002750	rpusd4	93	69.855	Oryzias_latipes
ENSMAMG00000023839	rpusd4	94	68.120	ENSORLG00020002044	rpusd4	90	68.120	Oryzias_latipes_hni
ENSMAMG00000023839	rpusd4	94	67.769	ENSORLG00015020034	rpusd4	90	67.769	Oryzias_latipes_hsok
ENSMAMG00000023839	rpusd4	94	70.083	ENSOMEG00000004861	rpusd4	88	70.083	Oryzias_melastigma
ENSMAMG00000023839	rpusd4	85	50.152	ENSOGAG00000008922	RPUSD4	93	47.778	Otolemur_garnettii
ENSMAMG00000023839	rpusd4	85	48.936	ENSOARG00000012238	RPUSD4	85	48.936	Ovis_aries
ENSMAMG00000023839	rpusd4	83	50.769	ENSPPAG00000042883	RPUSD4	79	50.769	Pan_paniscus
ENSMAMG00000023839	rpusd4	85	48.943	ENSPPRG00000003081	RPUSD4	86	48.943	Panthera_pardus
ENSMAMG00000023839	rpusd4	85	48.943	ENSPTIG00000012059	RPUSD4	86	50.485	Panthera_tigris_altaica
ENSMAMG00000023839	rpusd4	83	50.769	ENSPTRG00000004454	RPUSD4	85	50.769	Pan_troglodytes
ENSMAMG00000023839	rpusd4	83	49.538	ENSPANG00000015040	RPUSD4	85	49.538	Papio_anubis
ENSMAMG00000023839	rpusd4	91	57.303	ENSPKIG00000023986	rpusd4	90	57.303	Paramormyrops_kingsleyae
ENSMAMG00000023839	rpusd4	76	52.862	ENSPSIG00000014268	RPUSD4	93	52.862	Pelodiscus_sinensis
ENSMAMG00000023839	rpusd4	88	69.322	ENSPMGG00000002806	rpusd4	93	68.249	Periophthalmus_magnuspinnatus
ENSMAMG00000023839	rpusd4	86	42.388	ENSPEMG00000000278	Rpusd4	86	42.388	Peromyscus_maniculatus_bairdii
ENSMAMG00000023839	rpusd4	78	40.181	ENSPMAG00000008183	rpusd4	96	40.181	Petromyzon_marinus
ENSMAMG00000023839	rpusd4	91	50.142	ENSPCIG00000010212	RPUSD4	94	50.142	Phascolarctos_cinereus
ENSMAMG00000023839	rpusd4	94	72.011	ENSPFOG00000019030	rpusd4	97	72.011	Poecilia_formosa
ENSMAMG00000023839	rpusd4	94	72.951	ENSPLAG00000016848	rpusd4	94	72.951	Poecilia_latipinna
ENSMAMG00000023839	rpusd4	94	71.858	ENSPMEG00000017534	rpusd4	94	71.858	Poecilia_mexicana
ENSMAMG00000023839	rpusd4	90	73.219	ENSPREG00000005689	rpusd4	91	73.219	Poecilia_reticulata
ENSMAMG00000023839	rpusd4	83	50.154	ENSPPYG00000004043	RPUSD4	85	50.154	Pongo_abelii
ENSMAMG00000023839	rpusd4	66	55.000	ENSPCAG00000000753	RPUSD4	68	55.000	Procavia_capensis
ENSMAMG00000023839	rpusd4	90	46.571	ENSPCOG00000020694	RPUSD4	92	46.571	Propithecus_coquereli
ENSMAMG00000023839	rpusd4	91	48.864	ENSPVAG00000000988	RPUSD4	92	48.864	Pteropus_vampyrus
ENSMAMG00000023839	rpusd4	97	72.727	ENSPNYG00000009652	rpusd4	94	72.727	Pundamilia_nyererei
ENSMAMG00000023839	rpusd4	90	56.897	ENSPNAG00000012264	rpusd4	90	56.897	Pygocentrus_nattereri
ENSMAMG00000023839	rpusd4	86	49.851	ENSRNOG00000011567	Rpusd4	87	49.851	Rattus_norvegicus
ENSMAMG00000023839	rpusd4	82	49.843	ENSRBIG00000034842	RPUSD4	85	49.231	Rhinopithecus_bieti
ENSMAMG00000023839	rpusd4	82	49.843	ENSRROG00000039753	RPUSD4	85	49.231	Rhinopithecus_roxellana
ENSMAMG00000023839	rpusd4	96	45.161	ENSSBOG00000030413	RPUSD4	97	45.161	Saimiri_boliviensis_boliviensis
ENSMAMG00000023839	rpusd4	80	51.447	ENSSHAG00000008304	RPUSD4	100	51.447	Sarcophilus_harrisii
ENSMAMG00000023839	rpusd4	85	58.788	ENSSFOG00015006203	rpusd4	89	58.788	Scleropages_formosus
ENSMAMG00000023839	rpusd4	100	72.081	ENSSMAG00000020978	rpusd4	100	72.081	Scophthalmus_maximus
ENSMAMG00000023839	rpusd4	94	78.611	ENSSDUG00000013399	rpusd4	92	78.611	Seriola_dumerili
ENSMAMG00000023839	rpusd4	94	78.611	ENSSLDG00000023507	rpusd4	92	78.611	Seriola_lalandi_dorsalis
ENSMAMG00000023839	rpusd4	77	52.349	ENSSPUG00000001401	RPUSD4	90	50.151	Sphenodon_punctatus
ENSMAMG00000023839	rpusd4	100	72.890	ENSSPAG00000012163	rpusd4	100	72.890	Stegastes_partitus
ENSMAMG00000023839	rpusd4	90	47.293	ENSSSCG00000015233	RPUSD4	91	47.293	Sus_scrofa
ENSMAMG00000023839	rpusd4	78	51.333	ENSTGUG00000000773	RPUSD4	99	51.333	Taeniopygia_guttata
ENSMAMG00000023839	rpusd4	99	66.497	ENSTRUG00000012283	rpusd4	99	66.497	Takifugu_rubripes
ENSMAMG00000023839	rpusd4	93	70.308	ENSTNIG00000014676	rpusd4	90	70.308	Tetraodon_nigroviridis
ENSMAMG00000023839	rpusd4	86	47.748	ENSTTRG00000001555	RPUSD4	87	47.748	Tursiops_truncatus
ENSMAMG00000023839	rpusd4	85	49.848	ENSUMAG00000002219	RPUSD4	85	49.848	Ursus_maritimus
ENSMAMG00000023839	rpusd4	60	46.581	ENSVPAG00000001066	RPUSD4	91	45.020	Vicugna_pacos
ENSMAMG00000023839	rpusd4	86	50.299	ENSVVUG00000020101	RPUSD4	86	50.299	Vulpes_vulpes
ENSMAMG00000023839	rpusd4	100	68.462	ENSXCOG00000004676	rpusd4	100	68.462	Xiphophorus_couchianus
ENSMAMG00000023839	rpusd4	100	68.205	ENSXMAG00000023351	rpusd4	100	68.205	Xiphophorus_maculatus