EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000023948 (Gene tree)
Gene ID: 113130734
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 9257 bases
Position: chrOOHQ01000082.1:15021584-15030840
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000035629	zf-RanBP	PF00641.18	3.2e-09	1	1
ENSMAMP00000035628	zf-RanBP	PF00641.18	3.8e-09	1	1
ENSMAMP00000035629	RRM_1	PF00076.22	1.4e-12	1	1
ENSMAMP00000035628	RRM_1	PF00076.22	2.2e-12	1	1
ENSMAMP00000035629	G-patch	PF01585.23	3e-17	1	1
ENSMAMP00000035628	G-patch	PF01585.23	3.7e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000036547	-	2274	-	ENSMAMP00000035629	757 (aa)	-	-
ENSMAMT00000036546	-	5050	-	ENSMAMP00000035628	900 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000023948's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000023948's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000023948	-	90	78.049	ENSMAMG00000017277	rbm5	97	78.049
ENSMAMG00000023948	-	82	40.105	ENSMAMG00000008925	rbm10	77	42.600

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000023948	-	100	59.685	ENSG00000003756	RBM5	100	62.412	Homo_sapiens
ENSMAMG00000023948	-	100	62.500	ENSAPOG00000016625	rbm5	100	67.861	Acanthochromis_polyacanthus
ENSMAMG00000023948	-	93	83.649	ENSAPOG00000006011	-	100	85.427	Acanthochromis_polyacanthus
ENSMAMG00000023948	-	100	59.927	ENSAMEG00000012005	RBM5	100	62.646	Ailuropoda_melanoleuca
ENSMAMG00000023948	-	75	68.221	ENSACIG00000007571	rbm5	100	72.533	Amphilophus_citrinellus
ENSMAMG00000023948	-	99	73.698	ENSACIG00000021310	-	99	75.476	Amphilophus_citrinellus
ENSMAMG00000023948	-	99	78.777	ENSAOCG00000017312	-	99	79.401	Amphiprion_ocellaris
ENSMAMG00000023948	-	100	62.860	ENSAOCG00000002880	rbm5	100	68.088	Amphiprion_ocellaris
ENSMAMG00000023948	-	90	61.558	ENSAPEG00000011862	rbm5	92	67.347	Amphiprion_percula
ENSMAMG00000023948	-	99	78.947	ENSAPEG00000018222	RBM5	100	85.071	Amphiprion_percula
ENSMAMG00000023948	-	93	86.833	ENSATEG00000003838	-	100	87.663	Anabas_testudineus
ENSMAMG00000023948	-	100	67.822	ENSATEG00000024663	rbm5	100	67.985	Anabas_testudineus
ENSMAMG00000023948	-	93	59.740	ENSAPLG00000011176	RBM5	99	63.270	Anas_platyrhynchos
ENSMAMG00000023948	-	91	60.710	ENSACAG00000008580	RBM5	100	59.907	Anolis_carolinensis
ENSMAMG00000023948	-	100	59.806	ENSANAG00000025199	RBM5	100	62.646	Aotus_nancymaae
ENSMAMG00000023948	-	88	97.561	ENSACLG00000024198	RBM5	98	97.561	Astatotilapia_calliptera
ENSMAMG00000023948	-	100	62.818	ENSACLG00000012748	rbm5	100	66.897	Astatotilapia_calliptera
ENSMAMG00000023948	-	79	69.421	ENSAMXG00000008146	rbm5	100	69.559	Astyanax_mexicanus
ENSMAMG00000023948	-	100	59.564	ENSBTAG00000006330	RBM5	100	62.295	Bos_taurus
ENSMAMG00000023948	-	100	59.806	ENSCJAG00000004740	RBM5	100	62.485	Callithrix_jacchus
ENSMAMG00000023948	-	100	59.806	ENSCAFG00000010866	RBM5	100	62.529	Canis_familiaris
ENSMAMG00000023948	-	100	59.806	ENSCAFG00020022126	RBM5	100	62.529	Canis_lupus_dingo
ENSMAMG00000023948	-	100	59.685	ENSCHIG00000018435	RBM5	100	62.412	Capra_hircus
ENSMAMG00000023948	-	84	57.163	ENSTSYG00000004158	RBM5	98	60.251	Carlito_syrichta
ENSMAMG00000023948	-	100	47.368	ENSCAPG00000013495	RBM5	100	50.645	Cavia_aperea
ENSMAMG00000023948	-	100	59.758	ENSCPOG00000008151	RBM5	100	62.368	Cavia_porcellus
ENSMAMG00000023948	-	99	59.085	ENSCCAG00000026401	RBM5	100	61.700	Cebus_capucinus
ENSMAMG00000023948	-	100	59.806	ENSCATG00000041038	RBM5	100	62.529	Cercocebus_atys
ENSMAMG00000023948	-	100	59.830	ENSCLAG00000007873	RBM5	100	62.485	Chinchilla_lanigera
ENSMAMG00000023948	-	100	59.806	ENSCSAG00000014401	RBM5	100	62.529	Chlorocebus_sabaeus
ENSMAMG00000023948	-	80	55.208	ENSCHOG00000009429	RBM5	85	55.172	Choloepus_hoffmanni
ENSMAMG00000023948	-	91	60.789	ENSCPBG00000002406	RBM5	100	60.995	Chrysemys_picta_bellii
ENSMAMG00000023948	-	100	59.611	ENSCANG00000031250	RBM5	100	61.810	Colobus_angolensis_palliatus
ENSMAMG00000023948	-	100	59.443	ENSCGRG00001010543	Rbm5	100	61.350	Cricetulus_griseus_chok1gshd
ENSMAMG00000023948	-	100	59.443	ENSCGRG00000008475	Rbm5	100	61.350	Cricetulus_griseus_crigri
ENSMAMG00000023948	-	98	61.593	ENSCSEG00000000596	rbm5	97	65.854	Cynoglossus_semilaevis
ENSMAMG00000023948	-	99	65.423	ENSCVAG00000005655	rbm5	100	66.743	Cyprinodon_variegatus
ENSMAMG00000023948	-	100	56.014	ENSDARG00000098280	rbm5	100	63.158	Danio_rerio
ENSMAMG00000023948	-	100	59.685	ENSDNOG00000011756	RBM5	100	62.412	Dasypus_novemcinctus
ENSMAMG00000023948	-	100	60.169	ENSDORG00000007692	Rbm5	100	61.118	Dipodomys_ordii
ENSMAMG00000023948	-	91	59.133	ENSETEG00000012773	RBM5	93	59.873	Echinops_telfairi
ENSMAMG00000023948	-	90	49.568	ENSEBUG00000017034	rbm5	94	48.868	Eptatretus_burgeri
ENSMAMG00000023948	-	100	59.806	ENSEASG00005011835	RBM5	100	62.529	Equus_asinus_asinus
ENSMAMG00000023948	-	100	59.806	ENSECAG00000020447	RBM5	100	62.529	Equus_caballus
ENSMAMG00000023948	-	80	74.257	ENSEEUG00000005943	RBM5	88	74.257	Erinaceus_europaeus
ENSMAMG00000023948	-	100	64.468	ENSELUG00000022467	rbm5	100	68.555	Esox_lucius
ENSMAMG00000023948	-	100	59.903	ENSFCAG00000014639	RBM5	100	62.646	Felis_catus
ENSMAMG00000023948	-	92	59.375	ENSFALG00000008828	RBM5	98	61.263	Ficedula_albicollis
ENSMAMG00000023948	-	100	60.617	ENSFDAG00000001897	RBM5	100	62.192	Fukomys_damarensis
ENSMAMG00000023948	-	91	80.488	ENSFHEG00000015954	rbm5	98	80.488	Fundulus_heteroclitus
ENSMAMG00000023948	-	99	63.535	ENSGMOG00000016224	rbm5	100	64.153	Gadus_morhua
ENSMAMG00000023948	-	91	74.882	ENSGMOG00000007810	-	91	74.882	Gadus_morhua
ENSMAMG00000023948	-	92	59.505	ENSGALG00000039288	RBM5	95	61.779	Gallus_gallus
ENSMAMG00000023948	-	99	66.197	ENSGAFG00000010690	rbm5	100	67.434	Gambusia_affinis
ENSMAMG00000023948	-	100	71.600	ENSGACG00000000858	-	100	76.381	Gasterosteus_aculeatus
ENSMAMG00000023948	-	100	63.604	ENSGACG00000010469	rbm5	100	66.784	Gasterosteus_aculeatus
ENSMAMG00000023948	-	86	59.834	ENSGAGG00000007935	RBM5	99	60.169	Gopherus_agassizii
ENSMAMG00000023948	-	100	59.806	ENSGGOG00000014490	RBM5	100	62.529	Gorilla_gorilla
ENSMAMG00000023948	-	100	63.279	ENSHBUG00000001941	rbm5	100	67.359	Haplochromis_burtoni
ENSMAMG00000023948	-	88	97.561	ENSHBUG00000011901	-	98	97.561	Haplochromis_burtoni
ENSMAMG00000023948	-	100	59.758	ENSHGLG00000014844	RBM5	100	62.134	Heterocephalus_glaber_female
ENSMAMG00000023948	-	100	59.830	ENSHGLG00100010739	RBM5	100	62.295	Heterocephalus_glaber_male
ENSMAMG00000023948	-	100	61.231	ENSHCOG00000004536	-	100	67.418	Hippocampus_comes
ENSMAMG00000023948	-	95	61.057	ENSHCOG00000017110	rbm5	99	64.921	Hippocampus_comes
ENSMAMG00000023948	-	100	61.772	ENSIPUG00000000640	rbm5	100	69.042	Ictalurus_punctatus
ENSMAMG00000023948	-	100	60.654	ENSSTOG00000013856	RBM5	100	61.467	Ictidomys_tridecemlineatus
ENSMAMG00000023948	-	100	60.654	ENSJJAG00000008844	Rbm5	100	61.583	Jaculus_jaculus
ENSMAMG00000023948	-	100	64.009	ENSKMAG00000006663	rbm5	100	67.131	Kryptolebias_marmoratus
ENSMAMG00000023948	-	100	62.442	ENSLBEG00000020858	rbm5	100	66.628	Labrus_bergylta
ENSMAMG00000023948	-	76	61.880	ENSLBEG00000002522	-	91	75.786	Labrus_bergylta
ENSMAMG00000023948	-	100	71.718	ENSLBEG00000010877	-	94	79.172	Labrus_bergylta
ENSMAMG00000023948	-	93	67.105	ENSLACG00000016572	RBM5	100	62.884	Latimeria_chalumnae
ENSMAMG00000023948	-	100	60.706	ENSLOCG00000010774	rbm5	100	66.096	Lepisosteus_oculatus
ENSMAMG00000023948	-	100	59.734	ENSLAFG00000006733	RBM5	100	62.529	Loxodonta_africana
ENSMAMG00000023948	-	100	59.806	ENSMFAG00000031609	RBM5	100	62.529	Macaca_fascicularis
ENSMAMG00000023948	-	92	60.807	ENSMMUG00000004921	RBM5	99	62.426	Macaca_mulatta
ENSMAMG00000023948	-	100	59.806	ENSMNEG00000044394	RBM5	100	62.529	Macaca_nemestrina
ENSMAMG00000023948	-	100	59.677	ENSMLEG00000034689	RBM5	100	61.139	Mandrillus_leucophaeus
ENSMAMG00000023948	-	100	62.818	ENSMZEG00005015328	rbm5	100	66.897	Maylandia_zebra
ENSMAMG00000023948	-	93	77.553	ENSMZEG00005010035	-	100	77.844	Maylandia_zebra
ENSMAMG00000023948	-	92	59.452	ENSMGAG00000003972	RBM5	100	62.879	Meleagris_gallopavo
ENSMAMG00000023948	-	92	61.589	ENSMAUG00000020572	Rbm5	98	61.007	Mesocricetus_auratus
ENSMAMG00000023948	-	100	59.806	ENSMICG00000016179	RBM5	100	62.412	Microcebus_murinus
ENSMAMG00000023948	-	100	60.654	ENSMOCG00000017479	Rbm5	100	61.234	Microtus_ochrogaster
ENSMAMG00000023948	-	100	62.945	ENSMMOG00000015342	rbm5	100	63.539	Mola_mola
ENSMAMG00000023948	-	99	66.410	ENSMMOG00000021804	-	99	66.667	Mola_mola
ENSMAMG00000023948	-	100	60.507	ENSMODG00000012301	RBM5	100	61.287	Monodelphis_domestica
ENSMAMG00000023948	-	99	63.682	ENSMALG00000000609	rbm5	99	64.617	Monopterus_albus
ENSMAMG00000023948	-	93	83.710	ENSMALG00000016769	-	100	83.353	Monopterus_albus
ENSMAMG00000023948	-	100	59.129	MGP_CAROLIEiJ_G0032660	Rbm5	96	71.622	Mus_caroli
ENSMAMG00000023948	-	100	59.250	ENSMUSG00000032580	Rbm5	95	71.622	Mus_musculus
ENSMAMG00000023948	-	100	59.371	MGP_PahariEiJ_G0015528	Rbm5	90	75.540	Mus_pahari
ENSMAMG00000023948	-	100	59.250	MGP_SPRETEiJ_G0033805	Rbm5	96	71.622	Mus_spretus
ENSMAMG00000023948	-	100	59.420	ENSMLUG00000007875	RBM5	100	62.280	Myotis_lucifugus
ENSMAMG00000023948	-	100	60.412	ENSNGAG00000011777	Rbm5	100	61.001	Nannospalax_galili
ENSMAMG00000023948	-	98	72.682	ENSNBRG00000004400	RBM5	100	72.180	Neolamprologus_brichardi
ENSMAMG00000023948	-	100	62.933	ENSNBRG00000018097	rbm5	100	67.128	Neolamprologus_brichardi
ENSMAMG00000023948	-	100	59.806	ENSNLEG00000006943	RBM5	100	62.529	Nomascus_leucogenys
ENSMAMG00000023948	-	84	66.990	ENSMEUG00000012994	RBM5	100	58.057	Notamacropus_eugenii
ENSMAMG00000023948	-	91	58.498	ENSOPRG00000015154	RBM5	93	61.315	Ochotona_princeps
ENSMAMG00000023948	-	100	57.978	ENSODEG00000019111	-	100	58.314	Octodon_degus
ENSMAMG00000023948	-	100	59.830	ENSODEG00000016254	-	100	62.295	Octodon_degus
ENSMAMG00000023948	-	93	79.122	ENSONIG00000019007	RBM5	100	79.408	Oreochromis_niloticus
ENSMAMG00000023948	-	100	63.468	ENSONIG00000004107	rbm5	100	67.359	Oreochromis_niloticus
ENSMAMG00000023948	-	87	60.935	ENSOANG00000006557	RBM5	100	61.111	Ornithorhynchus_anatinus
ENSMAMG00000023948	-	100	59.322	ENSOCUG00000011652	RBM5	100	62.295	Oryctolagus_cuniculus
ENSMAMG00000023948	-	100	64.601	ENSORLG00000001053	-	100	70.047	Oryzias_latipes
ENSMAMG00000023948	-	95	62.010	ENSORLG00000003369	rbm5	99	66.341	Oryzias_latipes
ENSMAMG00000023948	-	100	63.041	ENSORLG00020021744	rbm5	100	66.822	Oryzias_latipes_hni
ENSMAMG00000023948	-	95	63.454	ENSORLG00020006782	-	98	68.927	Oryzias_latipes_hni
ENSMAMG00000023948	-	90	82.927	ENSORLG00015018379	rbm5	97	82.927	Oryzias_latipes_hsok
ENSMAMG00000023948	-	95	63.750	ENSORLG00015002854	-	98	69.496	Oryzias_latipes_hsok
ENSMAMG00000023948	-	80	63.948	ENSOMEG00000010653	-	89	77.320	Oryzias_melastigma
ENSMAMG00000023948	-	99	66.244	ENSOMEG00000002219	rbm5	100	67.090	Oryzias_melastigma
ENSMAMG00000023948	-	92	59.289	ENSOGAG00000004205	RBM5	100	61.237	Otolemur_garnettii
ENSMAMG00000023948	-	100	59.685	ENSOARG00000010923	RBM5	100	62.412	Ovis_aries
ENSMAMG00000023948	-	100	59.806	ENSPPAG00000043010	RBM5	100	62.529	Pan_paniscus
ENSMAMG00000023948	-	100	59.903	ENSPPRG00000005404	RBM5	100	62.646	Panthera_pardus
ENSMAMG00000023948	-	100	59.903	ENSPTIG00000000962	RBM5	100	62.646	Panthera_tigris_altaica
ENSMAMG00000023948	-	100	59.806	ENSPTRG00000014946	RBM5	100	62.529	Pan_troglodytes
ENSMAMG00000023948	-	100	59.806	ENSPANG00000018507	RBM5	100	62.529	Papio_anubis
ENSMAMG00000023948	-	75	58.252	ENSPKIG00000019187	-	100	57.536	Paramormyrops_kingsleyae
ENSMAMG00000023948	-	100	62.442	ENSPKIG00000024837	RBM5	100	66.974	Paramormyrops_kingsleyae
ENSMAMG00000023948	-	87	61.538	ENSPSIG00000016073	RBM5	100	62.834	Pelodiscus_sinensis
ENSMAMG00000023948	-	87	87.500	ENSPMGG00000004719	-	97	87.805	Periophthalmus_magnuspinnatus
ENSMAMG00000023948	-	78	65.442	ENSPMGG00000017347	rbm5	100	65.609	Periophthalmus_magnuspinnatus
ENSMAMG00000023948	-	91	58.158	ENSPMAG00000001998	rbm5	99	43.502	Petromyzon_marinus
ENSMAMG00000023948	-	100	60.507	ENSPCIG00000021531	RBM5	100	61.084	Phascolarctos_cinereus
ENSMAMG00000023948	-	100	61.565	ENSPLAG00000006318	rbm5	100	66.897	Poecilia_latipinna
ENSMAMG00000023948	-	71	68.935	ENSPMEG00000008651	rbm5	97	69.110	Poecilia_mexicana
ENSMAMG00000023948	-	100	62.284	ENSPMEG00000004295	rbm5	100	66.935	Poecilia_mexicana
ENSMAMG00000023948	-	100	61.636	ENSPREG00000003795	rbm5	100	67.089	Poecilia_reticulata
ENSMAMG00000023948	-	59	60.538	ENSPCAG00000005459	RBM5	70	58.019	Procavia_capensis
ENSMAMG00000023948	-	100	60.628	ENSPCOG00000025840	RBM5	100	62.881	Propithecus_coquereli
ENSMAMG00000023948	-	100	57.506	ENSPVAG00000006812	RBM5	100	60.539	Pteropus_vampyrus
ENSMAMG00000023948	-	100	63.164	ENSPNYG00000014787	rbm5	100	67.243	Pundamilia_nyererei
ENSMAMG00000023948	-	78	78.814	ENSPNYG00000006361	RBM5	99	79.155	Pundamilia_nyererei
ENSMAMG00000023948	-	100	64.111	ENSPNAG00000012070	rbm5	100	68.177	Pygocentrus_nattereri
ENSMAMG00000023948	-	100	59.250	ENSRNOG00000018153	Rbm5	100	61.001	Rattus_norvegicus
ENSMAMG00000023948	-	100	59.806	ENSRBIG00000012679	RBM5	100	62.412	Rhinopithecus_bieti
ENSMAMG00000023948	-	100	60.837	ENSRROG00000041331	RBM5	100	62.412	Rhinopithecus_roxellana
ENSMAMG00000023948	-	100	59.806	ENSSBOG00000006324	RBM5	100	62.529	Saimiri_boliviensis_boliviensis
ENSMAMG00000023948	-	100	59.564	ENSSHAG00000018260	RBM5	100	61.353	Sarcophilus_harrisii
ENSMAMG00000023948	-	100	63.785	ENSSFOG00015019052	rbm5	94	68.961	Scleropages_formosus
ENSMAMG00000023948	-	99	66.284	ENSSFOG00015019645	-	100	68.538	Scleropages_formosus
ENSMAMG00000023948	-	100	63.785	ENSSMAG00000017106	rbm5	100	67.171	Scophthalmus_maximus
ENSMAMG00000023948	-	100	62.384	ENSSDUG00000019775	rbm5	100	67.283	Seriola_dumerili
ENSMAMG00000023948	-	100	62.500	ENSSLDG00000002329	rbm5	100	67.283	Seriola_lalandi_dorsalis
ENSMAMG00000023948	-	93	85.782	ENSSLDG00000015996	-	100	87.559	Seriola_lalandi_dorsalis
ENSMAMG00000023948	-	52	78.947	ENSSARG00000009724	-	67	78.947	Sorex_araneus
ENSMAMG00000023948	-	99	62.383	ENSSPUG00000001876	RBM5	100	56.479	Sphenodon_punctatus
ENSMAMG00000023948	-	100	79.349	ENSSPAG00000020011	-	100	86.187	Stegastes_partitus
ENSMAMG00000023948	-	100	61.175	ENSSPAG00000019638	rbm5	100	67.321	Stegastes_partitus
ENSMAMG00000023948	-	92	70.732	ENSSSCG00000011395	RBM5	98	70.732	Sus_scrofa
ENSMAMG00000023948	-	92	54.830	ENSTGUG00000006417	RBM5	99	56.326	Taeniopygia_guttata
ENSMAMG00000023948	-	100	65.677	ENSTRUG00000008292	rbm5	100	70.292	Takifugu_rubripes
ENSMAMG00000023948	-	98	53.968	ENSTNIG00000014742	rbm5	79	75.676	Tetraodon_nigroviridis
ENSMAMG00000023948	-	100	54.182	ENSTBEG00000005424	RBM5	100	56.593	Tupaia_belangeri
ENSMAMG00000023948	-	91	56.366	ENSTTRG00000007717	RBM5	100	58.068	Tursiops_truncatus
ENSMAMG00000023948	-	100	59.927	ENSUAMG00000028347	RBM5	100	62.646	Ursus_americanus
ENSMAMG00000023948	-	100	59.927	ENSUMAG00000022027	RBM5	100	62.646	Ursus_maritimus
ENSMAMG00000023948	-	89	57.258	ENSVPAG00000009388	RBM5	100	60.363	Vicugna_pacos
ENSMAMG00000023948	-	100	59.806	ENSVVUG00000028647	RBM5	100	62.529	Vulpes_vulpes
ENSMAMG00000023948	-	100	63.249	ENSXMAG00000016369	rbm5	100	67.319	Xiphophorus_maculatus